RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 AAMPQ13685 434 aa13.37□□□□□ -0.27
MUC4-201ENST00000308466 NUDT16Q96DE0 195 aaKnown RBP13.37□□□□□ -0.27
MUC4-201ENST00000308466 UHRF1BP1LA0JNW5 1464 aa13.37□□□□□ -0.27
MUC4-201ENST00000308466 NPATQ14207 1427 aa13.37□□□□□ -0.27
MUC4-201ENST00000308466 TRIM27P14373 513 aa13.37□□□□□ -0.27
MUC4-201ENST00000308466 C22orf23Q9BZE7 217 aa13.37□□□□□ -0.27
MUC4-201ENST00000308466 SHROOM2Q13796 1616 aa13.36□□□□□ -0.27
MUC4-201ENST00000308466 SULT6B1Q6IMI4 303 aa13.36□□□□□ -0.27
MUC4-201ENST00000308466 CASC1Q6TDU7 716 aa13.36□□□□□ -0.27
MUC4-201ENST00000308466 ANKRD36BQ8N2N9 1353 aa13.36□□□□□ -0.27
MUC4-201ENST00000308466 C8orf34Q49A92 452 aa13.36□□□□□ -0.27
MUC4-201ENST00000308466 PTPRTO14522 1441 aa13.36□□□□□ -0.27
MUC4-201ENST00000308466 TWISTNBQ3B726 338 aaPredicted RBP13.36□□□□□ -0.27
MUC4-201ENST00000308466 CCDC61Q9Y6R9 512 aa13.35□□□□□ -0.27
MUC4-201ENST00000308466 IQGAP3Q86VI3 1631 aa13.35□□□□□ -0.27
MUC4-201ENST00000308466 ZRANB1Q9UGI0 708 aa13.35□□□□□ -0.27
MUC4-201ENST00000308466 ZNF521Q96K83 1311 aa13.34□□□□□ -0.27
MUC4-201ENST00000308466 ERVK-7P63135 1459 aa13.34□□□□□ -0.27
MUC4-201ENST00000308466 NINLQ9Y2I6 1382 aa13.34□□□□□ -0.27
MUC4-201ENST00000308466 KDM2BQ8NHM5 1336 aa13.34□□□□□ -0.27
MUC4-201ENST00000308466 STK31Q9BXU1 1019 aa13.34□□□□□ -0.27
MUC4-201ENST00000308466 TPRNQ4KMQ1 711 aa13.34□□□□□ -0.27
MUC4-201ENST00000308466 TRPM2O94759 1503 aa13.34□□□□□ -0.27
MUC4-201ENST00000308466 A0A1W2PP64 1363 aa13.33□□□□□ -0.28
MUC4-201ENST00000308466 PLXNC1O60486 1568 aa13.33□□□□□ -0.28
MUC4-201ENST00000308466 API5Q9BZZ5 524 aaKnown RBP13.33□□□□□ -0.28
MUC4-201ENST00000308466 UNC13BO14795 1591 aa13.33□□□□□ -0.28
MUC4-201ENST00000308466 NCKAP5LQ9HCH0 1330 aa13.33□□□□□ -0.28
MUC4-201ENST00000308466 GOLGA6L22H0YM25 854 aa13.33□□□□□ -0.28
MUC4-201ENST00000308466 CT47B1P0C2W7 299 aaPredicted RBP13.33□□□□□ -0.28
MUC4-201ENST00000308466 NFE2L2Q16236 605 aa13.33□□□□□ -0.28
MUC4-201ENST00000308466 ANP32BQ92688 251 aaKnown RBP13.33□□□□□ -0.28
MUC4-201ENST00000308466 SEC24BO95487 1268 aa13.32□□□□□ -0.28
MUC4-201ENST00000308466 ZFYVE16Q7Z3T8 1539 aa13.32□□□□□ -0.28
MUC4-201ENST00000308466 WASLO00401 505 aaPredicted RBP13.31□□□□□ -0.28
MUC4-201ENST00000308466 INSRP06213 1382 aa13.31□□□□□ -0.28
MUC4-201ENST00000308466 FAM83GA6ND36 823 aa13.31□□□□□ -0.28
MUC4-201ENST00000308466 CEBPAP49715 358 aaPredicted RBP13.31□□□□□ -0.28
MUC4-201ENST00000308466 TRMT2AQ8IZ69 625 aaKnown RBP13.3□□□□□ -0.28
MUC4-201ENST00000308466 NLRP6P59044 892 aa13.3□□□□□ -0.28
MUC4-201ENST00000308466 POLKQ9UBT6 870 aa13.3□□□□□ -0.28
MUC4-201ENST00000308466 NSD2O96028 1365 aa13.3□□□□□ -0.28
MUC4-201ENST00000308466 CCDC27Q2M243 656 aa13.3□□□□□ -0.28
MUC4-201ENST00000308466 FAM43AQ8N2R8 423 aa13.29□□□□□ -0.28
MUC4-201ENST00000308466 MIS18AQ9NYP9 233 aa13.29□□□□□ -0.28
MUC4-201ENST00000308466 OS9Q13438 667 aaPredicted RBP13.29□□□□□ -0.28
MUC4-201ENST00000308466 PHACTR3Q96KR7 559 aa13.29□□□□□ -0.28
MUC4-201ENST00000308466 TSPYL4Q9UJ04 414 aa13.29□□□□□ -0.28
MUC4-201ENST00000308466 TRIM44Q96DX7 344 aaPredicted RBP13.29□□□□□ -0.28
MUC4-201ENST00000308466 ZNF692Q9BU19 519 aaPredicted RBP13.29□□□□□ -0.28
MUC4-201ENST00000308466 CLTCL1P53675 1640 aa13.29□□□□□ -0.28
MUC4-201ENST00000308466 POGZQ7Z3K3 1410 aa13.28□□□□□ -0.28
MUC4-201ENST00000308466 MCM10Q7L590 875 aa13.28□□□□□ -0.28
MUC4-201ENST00000308466 HMMRO75330 724 aa13.27□□□□□ -0.28
MUC4-201ENST00000308466 TRIM6-TRIM34B2RNG4 842 aa13.27□□□□□ -0.29
MUC4-201ENST00000308466 CHD1LQ86WJ1 897 aa13.27□□□□□ -0.29
MUC4-201ENST00000308466 PUS7Q96PZ0 661 aaKnown RBP13.27□□□□□ -0.29
MUC4-201ENST00000308466 BCL11BQ9C0K0 894 aaPredicted RBP13.27□□□□□ -0.29
MUC4-201ENST00000308466 POLR1AO95602 1720 aaPredicted RBP13.27□□□□□ -0.29
MUC4-201ENST00000308466 EIF2S2P20042 333 aaKnown RBP13.26□□□□□ -0.29
MUC4-201ENST00000308466 TRIM35Q9UPQ4 493 aa13.26□□□□□ -0.29
MUC4-201ENST00000308466 FKBP5Q13451 457 aaPredicted RBP13.26□□□□□ -0.29
MUC4-201ENST00000308466 NOL8Q76FK4 1167 aaKnown RBP13.26□□□□□ -0.29
MUC4-201ENST00000308466 YEATS2Q9ULM3 1422 aa13.26□□□□□ -0.29
MUC4-201ENST00000308466 SBNO2Q9Y2G9 1366 aa13.26□□□□□ -0.29
MUC4-201ENST00000308466 SLC4A2P04920 1241 aa13.26□□□□□ -0.29
MUC4-201ENST00000308466 TSPYL6Q8N831 410 aa13.25□□□□□ -0.29
MUC4-201ENST00000308466 CHMP5Q9NZZ3 219 aa13.25□□□□□ -0.29
MUC4-201ENST00000308466 E9PCH4 1651 aa13.25□□□□□ -0.29
MUC4-201ENST00000308466 ABCC11Q96J66 1382 aa13.25□□□□□ -0.29
MUC4-201ENST00000308466 KDM5AP29375 1690 aaKnown RBP13.25□□□□□ -0.29
MUC4-201ENST00000308466 YTHDC2Q9H6S0 1430 aaKnown RBP13.25□□□□□ -0.29
MUC4-201ENST00000308466 L1TD1Q5T7N2 865 aaKnown RBP13.24□□□□□ -0.29
MUC4-201ENST00000308466 AEBP2Q6ZN18 517 aaPredicted RBP13.24□□□□□ -0.29
MUC4-201ENST00000308466 GBP4Q96PP9 640 aa13.24□□□□□ -0.29
MUC4-201ENST00000308466 MBIPQ9NS73 344 aa13.24□□□□□ -0.29
MUC4-201ENST00000308466 SYNMO15061 1565 aa13.24□□□□□ -0.29
MUC4-201ENST00000308466 RILPL2Q969X0 211 aa13.23□□□□□ -0.29
MUC4-201ENST00000308466 TBC1D2Q9BYX2 928 aa13.23□□□□□ -0.29
MUC4-201ENST00000308466 GOLGA6L3A6NEY3 463 aa13.23□□□□□ -0.29
MUC4-201ENST00000308466 RRP9O43818 475 aaKnown RBP13.23□□□□□ -0.29
MUC4-201ENST00000308466 ALDH1L2Q3SY69 923 aa13.23□□□□□ -0.29
MUC4-201ENST00000308466 FOXD4L5Q5VV16 416 aaPredicted RBP13.23□□□□□ -0.29
MUC4-201ENST00000308466 AEBP1Q8IUX7 1158 aa13.23□□□□□ -0.29
MUC4-201ENST00000308466 FOXD4L4Q8WXT5 416 aaPredicted RBP13.23□□□□□ -0.29
MUC4-201ENST00000308466 ABTB2Q8N961 1025 aa13.23□□□□□ -0.29
MUC4-201ENST00000308466 RBM33Q96EV2 1170 aaKnown RBP13.23□□□□□ -0.29
MUC4-201ENST00000308466 GCC1Q96CN9 775 aa13.22□□□□□ -0.29
MUC4-201ENST00000308466 MYOM2P54296 1465 aa13.22□□□□□ -0.29
MUC4-201ENST00000308466 MADDQ8WXG6 1647 aa13.22□□□□□ -0.29
MUC4-201ENST00000308466 HSP90AB2PQ58FF8 381 aa13.22□□□□□ -0.29
MUC4-201ENST00000308466 TET3O43151 1660 aa13.22□□□□□ -0.29
MUC4-201ENST00000308466 C8orf58Q8NAV2 365 aa13.22□□□□□ -0.29
MUC4-201ENST00000308466 IFT57Q9NWB7 429 aa13.22□□□□□ -0.29
MUC4-201ENST00000308466 PDIA4P13667 645 aaKnown RBP13.21□□□□□ -0.29
MUC4-201ENST00000308466 ZNF428Q96B54 188 aa13.21□□□□□ -0.29
MUC4-201ENST00000308466 IL16Q14005 1332 aa13.21□□□□□ -0.29
MUC4-201ENST00000308466 KRT24Q2M2I5 525 aa13.21□□□□□ -0.3
MUC4-201ENST00000308466 ACEP12821 1306 aa13.2□□□□□ -0.3
MUC4-201ENST00000308466 CFAP44Q96MT7 982 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms