RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 MBD3O95983 291 aa16.42■□□□□ 0.22
SEC23A-201ENST00000307712 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.42■□□□□ 0.22
SEC23A-201ENST00000307712 RAPGEF6Q8TEU7 1601 aa16.42■□□□□ 0.22
SEC23A-201ENST00000307712 SYCE3A1L190 88 aa16.42■□□□□ 0.22
SEC23A-201ENST00000307712 BAG4O95429 457 aaKnown RBP16.42■□□□□ 0.22
SEC23A-201ENST00000307712 HDAC1Q13547 482 aaPredicted RBP16.42■□□□□ 0.22
SEC23A-201ENST00000307712 PIK3C2GO75747 1445 aa16.41■□□□□ 0.22
SEC23A-201ENST00000307712 COG3Q96JB2 828 aa16.41■□□□□ 0.22
SEC23A-201ENST00000307712 GOLGA6L6A8MZA4 724 aa16.41■□□□□ 0.22
SEC23A-201ENST00000307712 BMP2KLQ5H9B9 411 aa16.4■□□□□ 0.22
SEC23A-201ENST00000307712 CWC22Q9HCG8 908 aaKnown RBP16.4■□□□□ 0.22
SEC23A-201ENST00000307712 A2MP01023 1474 aa16.4■□□□□ 0.22
SEC23A-201ENST00000307712 BCORL1Q5H9F3 1711 aa16.39■□□□□ 0.21
SEC23A-201ENST00000307712 INSRP06213 1382 aa16.39■□□□□ 0.21
SEC23A-201ENST00000307712 TSPY26PQ9H489 355 aa16.39■□□□□ 0.21
SEC23A-201ENST00000307712 CDK11BP21127 795 aaKnown RBP16.39■□□□□ 0.21
SEC23A-201ENST00000307712 PDCL3Q9H2J4 239 aa16.39■□□□□ 0.21
SEC23A-201ENST00000307712 ZNF521Q96K83 1311 aa16.38■□□□□ 0.21
SEC23A-201ENST00000307712 NUCB1Q02818 461 aa16.38■□□□□ 0.21
SEC23A-201ENST00000307712 ATP10BO94823 1461 aa16.38■□□□□ 0.21
SEC23A-201ENST00000307712 KLHL40Q2TBA0 621 aa16.37■□□□□ 0.21
SEC23A-201ENST00000307712 PRAM1Q96QH2 718 aa16.37■□□□□ 0.21
SEC23A-201ENST00000307712 ADGRL2O95490 1459 aa16.37■□□□□ 0.21
SEC23A-201ENST00000307712 RBM27Q9P2N5 1060 aaKnown RBP16.37■□□□□ 0.21
SEC23A-201ENST00000307712 CABP1Q9NZU7 370 aa16.37■□□□□ 0.21
SEC23A-201ENST00000307712 ATP6V1DQ9Y5K8 247 aa16.37■□□□□ 0.21
SEC23A-201ENST00000307712 GAS2L2Q8NHY3 880 aa16.36■□□□□ 0.21
SEC23A-201ENST00000307712 ERC2O15083 957 aa16.36■□□□□ 0.21
SEC23A-201ENST00000307712 MTERF4Q7Z6M4 381 aaKnown RBP16.36■□□□□ 0.21
SEC23A-201ENST00000307712 NUP160Q12769 1436 aa16.36■□□□□ 0.21
SEC23A-201ENST00000307712 SMARCA5O60264 1052 aaPredicted RBP16.36■□□□□ 0.21
SEC23A-201ENST00000307712 BCL11BQ9C0K0 894 aaPredicted RBP16.36■□□□□ 0.21
SEC23A-201ENST00000307712 POLR3AO14802 1390 aaPredicted RBP16.35■□□□□ 0.21
SEC23A-201ENST00000307712 FKBP5Q13451 457 aaPredicted RBP16.35■□□□□ 0.21
SEC23A-201ENST00000307712 CCDC27Q2M243 656 aa16.35■□□□□ 0.21
SEC23A-201ENST00000307712 SMC5Q8IY18 1101 aa16.35■□□□□ 0.21
SEC23A-201ENST00000307712 SNX21Q969T3 373 aa16.35■□□□□ 0.21
SEC23A-201ENST00000307712 VPS37CA5D8V6 355 aaPredicted RBP16.35■□□□□ 0.21
SEC23A-201ENST00000307712 TRMT2AQ8IZ69 625 aaKnown RBP16.35■□□□□ 0.21
SEC23A-201ENST00000307712 USP19O94966 1318 aa16.35■□□□□ 0.21
SEC23A-201ENST00000307712 RAB3GAP1Q15042 981 aa16.35■□□□□ 0.21
SEC23A-201ENST00000307712 ANTXR1Q9H6X2 564 aa16.35■□□□□ 0.21
SEC23A-201ENST00000307712 FCHSD2O94868 740 aa16.34■□□□□ 0.21
SEC23A-201ENST00000307712 MBD5Q9P267 1494 aa16.34■□□□□ 0.21
SEC23A-201ENST00000307712 ALDH1L2Q3SY69 923 aa16.34■□□□□ 0.21
SEC23A-201ENST00000307712 SMC3Q9UQE7 1217 aa16.34■□□□□ 0.21
SEC23A-201ENST00000307712 FIBPO43427 364 aa16.33■□□□□ 0.2
SEC23A-201ENST00000307712 ZNF592Q92610 1267 aa16.33■□□□□ 0.2
SEC23A-201ENST00000307712 ITSN2Q9NZM3 1697 aa16.33■□□□□ 0.2
SEC23A-201ENST00000307712 NRDCO43847 1150 aa16.32■□□□□ 0.2
SEC23A-201ENST00000307712 ZNF428Q96B54 188 aa16.32■□□□□ 0.2
SEC23A-201ENST00000307712 DCTN1Q14203 1278 aa16.32■□□□□ 0.2
SEC23A-201ENST00000307712 ZSCAN23Q3MJ62 389 aa16.32■□□□□ 0.2
SEC23A-201ENST00000307712 LTV1Q96GA3 475 aaPredicted RBP16.32■□□□□ 0.2
SEC23A-201ENST00000307712 MAGI2Q86UL8 1455 aa16.32■□□□□ 0.2
SEC23A-201ENST00000307712 PRDM10Q9NQV6 1147 aa16.32■□□□□ 0.2
SEC23A-201ENST00000307712 ZBTB40Q9NUA8 1239 aa16.32■□□□□ 0.2
SEC23A-201ENST00000307712 DISP1Q96F81 1524 aa16.32■□□□□ 0.2
SEC23A-201ENST00000307712 KIAA0556O60303 1618 aa16.31■□□□□ 0.2
SEC23A-201ENST00000307712 NFE2L2Q16236 605 aa16.31■□□□□ 0.2
SEC23A-201ENST00000307712 FBLN1P23142 703 aa16.31■□□□□ 0.2
SEC23A-201ENST00000307712 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.31■□□□□ 0.2
SEC23A-201ENST00000307712 SLC4A2P04920 1241 aa16.31■□□□□ 0.2
SEC23A-201ENST00000307712 UPF3BQ9BZI7 483 aaKnown RBP16.31■□□□□ 0.2
SEC23A-201ENST00000307712 TSPYL4Q9UJ04 414 aa16.31■□□□□ 0.2
SEC23A-201ENST00000307712 MCM2P49736 904 aa16.3■□□□□ 0.2
SEC23A-201ENST00000307712 DIAPH3Q9NSV4 1193 aa16.3■□□□□ 0.2
SEC23A-201ENST00000307712 AMPHP49418 695 aa16.3■□□□□ 0.2
SEC23A-201ENST00000307712 SPC24Q8NBT2 197 aa16.3■□□□□ 0.2
SEC23A-201ENST00000307712 CDK19Q9BWU1 502 aa16.3■□□□□ 0.2
SEC23A-201ENST00000307712 GDPD2Q9HCC8 539 aa16.3■□□□□ 0.2
SEC23A-201ENST00000307712 FSD2A1L4K1 749 aa16.29■□□□□ 0.2
SEC23A-201ENST00000307712 HMGN5P82970 282 aaKnown RBP16.29■□□□□ 0.2
SEC23A-201ENST00000307712 ZNF771Q7L3S4 317 aaPredicted RBP16.29■□□□□ 0.2
SEC23A-201ENST00000307712 GAS2L3Q86XJ1 694 aa16.29■□□□□ 0.2
SEC23A-201ENST00000307712 ABCC11Q96J66 1382 aa16.29■□□□□ 0.2
SEC23A-201ENST00000307712 SHANK2Q9UPX8 1470 aa16.28■□□□□ 0.2
SEC23A-201ENST00000307712 PRIM1P49642 420 aaKnown RBP16.28■□□□□ 0.2
SEC23A-201ENST00000307712 RBM25P49756 843 aaKnown RBP16.28■□□□□ 0.2
SEC23A-201ENST00000307712 EXOC6BQ9Y2D4 811 aa16.28■□□□□ 0.2
SEC23A-201ENST00000307712 LMOD2Q6P5Q4 547 aa16.28■□□□□ 0.2
SEC23A-201ENST00000307712 IFT57Q9NWB7 429 aa16.28■□□□□ 0.2
SEC23A-201ENST00000307712 RPAP2Q8IXW5 612 aaPredicted RBP16.27■□□□□ 0.2
SEC23A-201ENST00000307712 NPC1L1Q9UHC9 1359 aa16.27■□□□□ 0.2
SEC23A-201ENST00000307712 EIF2S2P20042 333 aaKnown RBP16.27■□□□□ 0.2
SEC23A-201ENST00000307712 HSP90B1P14625 803 aaKnown RBP16.27■□□□□ 0.19
SEC23A-201ENST00000307712 C16orf71Q8IYS4 520 aaPredicted RBP16.27■□□□□ 0.19
SEC23A-201ENST00000307712 ABCA5Q8WWZ7 1642 aa16.27■□□□□ 0.19
SEC23A-201ENST00000307712 A0A0U1RQG5 324 aaPredicted RBP16.26■□□□□ 0.19
SEC23A-201ENST00000307712 SULT6B1Q6IMI4 303 aa16.26■□□□□ 0.19
SEC23A-201ENST00000307712 SYCP2Q9BX26 1530 aa16.26■□□□□ 0.19
SEC23A-201ENST00000307712 NOS1P29475 1434 aa16.26■□□□□ 0.19
SEC23A-201ENST00000307712 HTATSF1O43719 755 aaKnown RBP16.26■□□□□ 0.19
SEC23A-201ENST00000307712 RRS1Q15050 365 aaKnown RBP16.26■□□□□ 0.19
SEC23A-201ENST00000307712 GPATCH3Q96I76 525 aa16.26■□□□□ 0.19
SEC23A-201ENST00000307712 OFD1O75665 1012 aa16.26■□□□□ 0.19
SEC23A-201ENST00000307712 ADAMTS12P58397 1594 aa16.25■□□□□ 0.19
SEC23A-201ENST00000307712 GOLGA6L19H0YKK7 550 aa16.25■□□□□ 0.19
SEC23A-201ENST00000307712 SASS6Q6UVJ0 657 aa16.25■□□□□ 0.19
SEC23A-201ENST00000307712 WDR33Q9C0J8 1336 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms