RNA–Protein interactions for RNA: ENST00000307305.12

PHTF2-203, Transcript of putative homeodomain transcription factor 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PHTF2, Length 4,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-203ENST00000307305 TSPYL4Q9UJ04 414 aa13.94□□□□□ -0.18
PHTF2-203ENST00000307305 R3HCC1Q9Y3T6 440 aaKnown RBP13.94□□□□□ -0.18
PHTF2-203ENST00000307305 ADAMTS12P58397 1594 aa13.94□□□□□ -0.18
PHTF2-203ENST00000307305 SLC4A2P04920 1241 aa13.94□□□□□ -0.18
PHTF2-203ENST00000307305 ABCA5Q8WWZ7 1642 aa13.94□□□□□ -0.18
PHTF2-203ENST00000307305 NME9Q86XW9 330 aa13.94□□□□□ -0.18
PHTF2-203ENST00000307305 COL17A1Q9UMD9 1497 aaPredicted RBP13.93□□□□□ -0.18
PHTF2-203ENST00000307305 SKOR2Q2VWA4 1001 aaPredicted RBP13.93□□□□□ -0.18
PHTF2-203ENST00000307305 ZRANB1Q9UGI0 708 aa13.93□□□□□ -0.18
PHTF2-203ENST00000307305 EXOC6BQ9Y2D4 811 aa13.93□□□□□ -0.18
PHTF2-203ENST00000307305 HAP1P54257 671 aaPredicted RBP13.92□□□□□ -0.18
PHTF2-203ENST00000307305 ESPNB1AK53 854 aa13.92□□□□□ -0.18
PHTF2-203ENST00000307305 F6X3S4 739 aa13.92□□□□□ -0.18
PHTF2-203ENST00000307305 K7ELQ4 463 aaPredicted RBP13.92□□□□□ -0.18
PHTF2-203ENST00000307305 INTS3Q68E01 1043 aaKnown RBP13.92□□□□□ -0.18
PHTF2-203ENST00000307305 C16orf71Q8IYS4 520 aaPredicted RBP13.92□□□□□ -0.18
PHTF2-203ENST00000307305 TSPYL6Q8N831 410 aa13.92□□□□□ -0.18
PHTF2-203ENST00000307305 LARP6Q9BRS8 491 aaKnown RBP13.92□□□□□ -0.18
PHTF2-203ENST00000307305 KRT24Q2M2I5 525 aa13.92□□□□□ -0.18
PHTF2-203ENST00000307305 CCDC27Q2M243 656 aa13.91□□□□□ -0.18
PHTF2-203ENST00000307305 MAGI2Q86UL8 1455 aa13.91□□□□□ -0.18
PHTF2-203ENST00000307305 ASXL1Q8IXJ9 1541 aa13.91□□□□□ -0.18
PHTF2-203ENST00000307305 REC8O95072 547 aa13.91□□□□□ -0.18
PHTF2-203ENST00000307305 ZNF330Q9Y3S2 320 aaPredicted RBP13.91□□□□□ -0.18
PHTF2-203ENST00000307305 KDM5CP41229 1560 aa13.91□□□□□ -0.18
PHTF2-203ENST00000307305 AAMPQ13685 434 aa13.9□□□□□ -0.18
PHTF2-203ENST00000307305 UPF3BQ9BZI7 483 aaKnown RBP13.9□□□□□ -0.18
PHTF2-203ENST00000307305 IL1RAPL2Q9NP60 686 aa13.9□□□□□ -0.18
PHTF2-203ENST00000307305 RRAGDQ9NQL2 400 aaPredicted RBP13.9□□□□□ -0.18
PHTF2-203ENST00000307305 TBC1D9Q6ZT07 1266 aa13.9□□□□□ -0.18
PHTF2-203ENST00000307305 DDX54Q8TDD1 881 aaKnown RBP13.9□□□□□ -0.19
PHTF2-203ENST00000307305 DTNBO60941 627 aa13.89□□□□□ -0.19
PHTF2-203ENST00000307305 KIAA2012Q0VF49 1180 aa13.89□□□□□ -0.19
PHTF2-203ENST00000307305 FYB1O15117 783 aa13.89□□□□□ -0.19
PHTF2-203ENST00000307305 PHACTR3Q96KR7 559 aa13.88□□□□□ -0.19
PHTF2-203ENST00000307305 GCC1Q96CN9 775 aa13.88□□□□□ -0.19
PHTF2-203ENST00000307305 FOSBP53539 338 aa13.88□□□□□ -0.19
PHTF2-203ENST00000307305 ATAD2Q6PL18 1390 aa13.88□□□□□ -0.19
PHTF2-203ENST00000307305 NCKAP5LQ9HCH0 1330 aa13.87□□□□□ -0.19
PHTF2-203ENST00000307305 C14orf93Q9H972 538 aaKnown RBP13.87□□□□□ -0.19
PHTF2-203ENST00000307305 GDPD2Q9HCC8 539 aa13.87□□□□□ -0.19
PHTF2-203ENST00000307305 ITSN2Q9NZM3 1697 aa13.87□□□□□ -0.19
PHTF2-203ENST00000307305 PTMSP20962 102 aa13.87□□□□□ -0.19
PHTF2-203ENST00000307305 VPS37CA5D8V6 355 aaPredicted RBP13.87□□□□□ -0.19
PHTF2-203ENST00000307305 NUCB2P80303 420 aa13.87□□□□□ -0.19
PHTF2-203ENST00000307305 NFE2L2Q16236 605 aa13.87□□□□□ -0.19
PHTF2-203ENST00000307305 ARHGEF12Q9NZN5 1544 aa13.87□□□□□ -0.19
PHTF2-203ENST00000307305 ZMYM4Q5VZL5 1548 aa13.86□□□□□ -0.19
PHTF2-203ENST00000307305 SLC26A8Q96RN1 970 aa13.86□□□□□ -0.19
PHTF2-203ENST00000307305 RBM27Q9P2N5 1060 aaKnown RBP13.86□□□□□ -0.19
PHTF2-203ENST00000307305 FCHSD2O94868 740 aa13.86□□□□□ -0.19
PHTF2-203ENST00000307305 NINLQ9Y2I6 1382 aa13.86□□□□□ -0.19
PHTF2-203ENST00000307305 BLMP54132 1417 aaPredicted RBP13.86□□□□□ -0.19
PHTF2-203ENST00000307305 SURF6O75683 361 aaKnown RBP13.85□□□□□ -0.19
PHTF2-203ENST00000307305 FAM69CQ0P6D2 419 aa13.85□□□□□ -0.19
PHTF2-203ENST00000307305 HDGFP51858 240 aaKnown RBP13.85□□□□□ -0.19
PHTF2-203ENST00000307305 C8orf58Q8NAV2 365 aa13.85□□□□□ -0.19
PHTF2-203ENST00000307305 FBXW7Q969H0 707 aa13.85□□□□□ -0.19
PHTF2-203ENST00000307305 CFAP44Q96MT7 982 aa13.85□□□□□ -0.19
PHTF2-203ENST00000307305 MBIPQ9NS73 344 aa13.85□□□□□ -0.19
PHTF2-203ENST00000307305 LRRIQ1Q96JM4 1722 aa13.85□□□□□ -0.19
PHTF2-203ENST00000307305 ZRSR1Q15695 479 aaKnown RBP13.84□□□□□ -0.19
PHTF2-203ENST00000307305 SYAP1Q96A49 352 aaPredicted RBP13.84□□□□□ -0.19
PHTF2-203ENST00000307305 ADGRL2O95490 1459 aa13.84□□□□□ -0.19
PHTF2-203ENST00000307305 SYCE3A1L190 88 aa13.84□□□□□ -0.19
PHTF2-203ENST00000307305 AIMP1Q12904 312 aaKnown RBP13.84□□□□□ -0.19
PHTF2-203ENST00000307305 GAS2L2Q8NHY3 880 aa13.84□□□□□ -0.19
PHTF2-203ENST00000307305 FIBPO43427 364 aa13.83□□□□□ -0.19
PHTF2-203ENST00000307305 RABEP1Q15276 862 aa13.83□□□□□ -0.19
PHTF2-203ENST00000307305 NLRP6P59044 892 aa13.83□□□□□ -0.2
PHTF2-203ENST00000307305 AEBP1Q8IUX7 1158 aa13.83□□□□□ -0.2
PHTF2-203ENST00000307305 OSCARQ8IYS5 282 aa13.83□□□□□ -0.2
PHTF2-203ENST00000307305 OTUD7AQ8TE49 926 aaPredicted RBP13.83□□□□□ -0.2
PHTF2-203ENST00000307305 PBRM1Q86U86 1689 aa13.83□□□□□ -0.2
PHTF2-203ENST00000307305 CHAMP1Q96JM3 812 aa13.82□□□□□ -0.2
PHTF2-203ENST00000307305 ZNF521Q96K83 1311 aa13.82□□□□□ -0.2
PHTF2-203ENST00000307305 ADGRL1O94910 1474 aa13.82□□□□□ -0.2
PHTF2-203ENST00000307305 RBM33Q96EV2 1170 aaKnown RBP13.82□□□□□ -0.2
PHTF2-203ENST00000307305 DIAPH3Q9NSV4 1193 aa13.82□□□□□ -0.2
PHTF2-203ENST00000307305 HSP90B1P14625 803 aaKnown RBP13.82□□□□□ -0.2
PHTF2-203ENST00000307305 NUTM1Q86Y26 1132 aa13.82□□□□□ -0.2
PHTF2-203ENST00000307305 XPCQ01831 940 aaPredicted RBP13.81□□□□□ -0.2
PHTF2-203ENST00000307305 NUCB1Q02818 461 aa13.81□□□□□ -0.2
PHTF2-203ENST00000307305 CT47B1P0C2W7 299 aaPredicted RBP13.81□□□□□ -0.2
PHTF2-203ENST00000307305 C9orf78Q9NZ63 289 aaPredicted RBP13.81□□□□□ -0.2
PHTF2-203ENST00000307305 PIK3C2GO75747 1445 aa13.81□□□□□ -0.2
PHTF2-203ENST00000307305 ZBTB40Q9NUA8 1239 aa13.81□□□□□ -0.2
PHTF2-203ENST00000307305 PLA2R1Q13018 1463 aa13.81□□□□□ -0.2
PHTF2-203ENST00000307305 TARBP1Q13395 1621 aaKnown RBP13.8□□□□□ -0.2
PHTF2-203ENST00000307305 CHAF1AQ13111 956 aaPredicted RBP13.8□□□□□ -0.2
PHTF2-203ENST00000307305 MEIS3Q99687 375 aa13.8□□□□□ -0.2
PHTF2-203ENST00000307305 TRIM35Q9UPQ4 493 aa13.8□□□□□ -0.2
PHTF2-203ENST00000307305 POLR3AO14802 1390 aaPredicted RBP13.8□□□□□ -0.2
PHTF2-203ENST00000307305 UBTFL1P0CB47 393 aaPredicted RBP13.8□□□□□ -0.2
PHTF2-203ENST00000307305 TEFQ10587 303 aa13.8□□□□□ -0.2
PHTF2-203ENST00000307305 NUDT16Q96DE0 195 aaKnown RBP13.8□□□□□ -0.2
PHTF2-203ENST00000307305 MBD5Q9P267 1494 aa13.8□□□□□ -0.2
PHTF2-203ENST00000307305 EIF4G3O43432 1585 aaKnown RBP13.79□□□□□ -0.2
PHTF2-203ENST00000307305 ERC2O15083 957 aa13.79□□□□□ -0.2
PHTF2-203ENST00000307305 BAG4O95429 457 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms