RNA–Protein interactions for RNA: ENST00000307289.10

SYVN1-202, Transcript of synoviolin 1, humanhuman

TSL 1 (best) BASIC

Gene SYVN1, Length 2,841 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-202ENST00000307289 PCDHB15Q9Y5E8 787 aa21.21■□□□□ 0.99
SYVN1-202ENST00000307289 CCDC27Q2M243 656 aa21.21■□□□□ 0.99
SYVN1-202ENST00000307289 COL3A1P02461 1466 aaPredicted RBP21.2■□□□□ 0.98
SYVN1-202ENST00000307289 EXOSC9Q06265 439 aaKnown RBP21.2■□□□□ 0.98
SYVN1-202ENST00000307289 DIAPH1O60610 1272 aaKnown RBP21.18■□□□□ 0.98
SYVN1-202ENST00000307289 PLPPR3Q6T4P5 718 aa21.18■□□□□ 0.98
SYVN1-202ENST00000307289 NINLQ9Y2I6 1382 aa21.18■□□□□ 0.98
SYVN1-202ENST00000307289 RIPK4P57078 832 aa21.18■□□□□ 0.98
SYVN1-202ENST00000307289 NME9Q86XW9 330 aa21.18■□□□□ 0.98
SYVN1-202ENST00000307289 HMOX1P09601 288 aa21.17■□□□□ 0.98
SYVN1-202ENST00000307289 POLKQ9UBT6 870 aa21.17■□□□□ 0.98
SYVN1-202ENST00000307289 EMILIN1Q9Y6C2 1016 aa21.17■□□□□ 0.98
SYVN1-202ENST00000307289 ZMYM3Q14202 1370 aa21.16■□□□□ 0.98
SYVN1-202ENST00000307289 MAPK8IP3Q9UPT6 1336 aa21.16■□□□□ 0.98
SYVN1-202ENST00000307289 FAM161AQ3B820 660 aa21.16■□□□□ 0.98
SYVN1-202ENST00000307289 MYH16Q9H6N6 1097 aa21.16■□□□□ 0.98
SYVN1-202ENST00000307289 NUTM2FA1L443 756 aa21.15■□□□□ 0.98
SYVN1-202ENST00000307289 THUMPD2Q9BTF0 503 aaKnown RBP21.15■□□□□ 0.98
SYVN1-202ENST00000307289 ESF1Q9H501 851 aaKnown RBP21.14■□□□□ 0.98
SYVN1-202ENST00000307289 AGLP35573 1532 aa21.14■□□□□ 0.98
SYVN1-202ENST00000307289 PHACTR3Q96KR7 559 aa21.14■□□□□ 0.97
SYVN1-202ENST00000307289 SPATA31D1Q6ZQQ2 1576 aa21.14■□□□□ 0.97
SYVN1-202ENST00000307289 ADGRB2O60241 1585 aa21.14■□□□□ 0.97
SYVN1-202ENST00000307289 PRKAR2BP31323 418 aa21.13■□□□□ 0.97
SYVN1-202ENST00000307289 SSH1Q8WYL5 1049 aa21.13■□□□□ 0.97
SYVN1-202ENST00000307289 WASLO00401 505 aaPredicted RBP21.12■□□□□ 0.97
SYVN1-202ENST00000307289 SEC24BO95487 1268 aa21.12■□□□□ 0.97
SYVN1-202ENST00000307289 SMC4Q9NTJ3 1288 aa21.12■□□□□ 0.97
SYVN1-202ENST00000307289 CEBPAP49715 358 aaPredicted RBP21.11■□□□□ 0.97
SYVN1-202ENST00000307289 RRS1Q15050 365 aaKnown RBP21.11■□□□□ 0.97
SYVN1-202ENST00000307289 PPP6R1Q9UPN7 881 aa21.11■□□□□ 0.97
SYVN1-202ENST00000307289 PNPLA6Q8IY17 1366 aa21.1■□□□□ 0.97
SYVN1-202ENST00000307289 SETD1AO15047 1707 aaKnown RBP21.1■□□□□ 0.97
SYVN1-202ENST00000307289 NUDT16Q96DE0 195 aaKnown RBP21.1■□□□□ 0.97
SYVN1-202ENST00000307289 PPIP5K1Q6PFW1 1433 aa21.09■□□□□ 0.97
SYVN1-202ENST00000307289 NRXN3Q9Y4C0 1643 aa21.09■□□□□ 0.97
SYVN1-202ENST00000307289 TRIM27P14373 513 aa21.09■□□□□ 0.97
SYVN1-202ENST00000307289 DEKP35659 375 aaKnown RBP21.09■□□□□ 0.97
SYVN1-202ENST00000307289 REREQ9P2R6 1566 aa21.08■□□□□ 0.97
SYVN1-202ENST00000307289 RSPH6AQ9H0K4 717 aa21.08■□□□□ 0.97
SYVN1-202ENST00000307289 NOB1Q9ULX3 412 aaKnown RBP21.07■□□□□ 0.96
SYVN1-202ENST00000307289 ZKSCAN2Q63HK3 967 aa21.07■□□□□ 0.96
SYVN1-202ENST00000307289 FTSJ3Q8IY81 847 aaKnown RBP21.07■□□□□ 0.96
SYVN1-202ENST00000307289 MED14O60244 1454 aa21.07■□□□□ 0.96
SYVN1-202ENST00000307289 PRR36Q9H6K5 1346 aa21.06■□□□□ 0.96
SYVN1-202ENST00000307289 MVPQ14764 893 aaKnown RBP21.06■□□□□ 0.96
SYVN1-202ENST00000307289 DZIP1LQ8IYY4 767 aaKnown RBP21.06■□□□□ 0.96
SYVN1-202ENST00000307289 ANKRD26Q9UPS8 1709 aa21.06■□□□□ 0.96
SYVN1-202ENST00000307289 PDZRN3Q9UPQ7 1066 aa21.05■□□□□ 0.96
SYVN1-202ENST00000307289 LRRC7Q96NW7 1537 aa21.04■□□□□ 0.96
SYVN1-202ENST00000307289 ELL2O00472 640 aaPredicted RBP21.04■□□□□ 0.96
SYVN1-202ENST00000307289 LTKP29376 864 aa21.04■□□□□ 0.96
SYVN1-202ENST00000307289 KIF20BQ96Q89 1820 aa21.04■□□□□ 0.96
SYVN1-202ENST00000307289 KIF13AQ9H1H9 1805 aa21.04■□□□□ 0.96
SYVN1-202ENST00000307289 CPS1P31327 1500 aa21.04■□□□□ 0.96
SYVN1-202ENST00000307289 FCHSD2O94868 740 aa21.03■□□□□ 0.96
SYVN1-202ENST00000307289 ITPRIPQ8IWB1 547 aa21.03■□□□□ 0.96
SYVN1-202ENST00000307289 SLC26A8Q96RN1 970 aa21.03■□□□□ 0.96
SYVN1-202ENST00000307289 DLC1Q96QB1 1528 aa21.03■□□□□ 0.96
SYVN1-202ENST00000307289 CPSF1Q10570 1443 aaKnown RBP21.03■□□□□ 0.96
SYVN1-202ENST00000307289 ROBO2Q9HCK4 1378 aa21.03■□□□□ 0.96
SYVN1-202ENST00000307289 MAP2P11137 1827 aaKnown RBP21.02■□□□□ 0.96
SYVN1-202ENST00000307289 USP19O94966 1318 aa21.02■□□□□ 0.95
SYVN1-202ENST00000307289 IL13P35225 146 aa21.01■□□□□ 0.95
SYVN1-202ENST00000307289 CCDC61Q9Y6R9 512 aa21.01■□□□□ 0.95
SYVN1-202ENST00000307289 TNRQ92752 1358 aa21.01■□□□□ 0.95
SYVN1-202ENST00000307289 FAM83GA6ND36 823 aa21.01■□□□□ 0.95
SYVN1-202ENST00000307289 SOX12O15370 315 aa21.01■□□□□ 0.95
SYVN1-202ENST00000307289 TSPYL6Q8N831 410 aa21.01■□□□□ 0.95
SYVN1-202ENST00000307289 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.01■□□□□ 0.95
SYVN1-202ENST00000307289 ATP7BP35670 1465 aa21.01■□□□□ 0.95
SYVN1-202ENST00000307289 NEFMP07197 916 aa21■□□□□ 0.95
SYVN1-202ENST00000307289 TMEM57Q8N5G2 664 aa21■□□□□ 0.95
SYVN1-202ENST00000307289 DCTN1Q14203 1278 aa21■□□□□ 0.95
SYVN1-202ENST00000307289 NCBP3Q53F19 620 aaKnown RBP21■□□□□ 0.95
SYVN1-202ENST00000307289 PMFBP1Q8TBY8 1022 aa21■□□□□ 0.95
SYVN1-202ENST00000307289 ATF7IPQ6VMQ6 1270 aa20.99■□□□□ 0.95
SYVN1-202ENST00000307289 FAM135BQ49AJ0 1406 aa20.98■□□□□ 0.95
SYVN1-202ENST00000307289 COG3Q96JB2 828 aa20.98■□□□□ 0.95
SYVN1-202ENST00000307289 TMEM2Q9UHN6 1383 aa20.98■□□□□ 0.95
SYVN1-202ENST00000307289 RTL5Q5HYW3 569 aaPredicted RBP20.97■□□□□ 0.95
SYVN1-202ENST00000307289 DDRGK1Q96HY6 314 aa20.97■□□□□ 0.95
SYVN1-202ENST00000307289 EDC4Q6P2E9 1401 aaKnown RBP20.97■□□□□ 0.95
SYVN1-202ENST00000307289 AEBP1Q8IUX7 1158 aa20.97■□□□□ 0.95
SYVN1-202ENST00000307289 NFE2L2Q16236 605 aa20.96■□□□□ 0.95
SYVN1-202ENST00000307289 RWDD1Q9H446 243 aaPredicted RBP20.96■□□□□ 0.95
SYVN1-202ENST00000307289 IL16Q14005 1332 aa20.95■□□□□ 0.94
SYVN1-202ENST00000307289 ADAMTS13Q76LX8 1427 aa20.93■□□□□ 0.94
SYVN1-202ENST00000307289 CT47B1P0C2W7 299 aaPredicted RBP20.93■□□□□ 0.94
SYVN1-202ENST00000307289 PNNQ9H307 717 aaKnown RBP20.92■□□□□ 0.94
SYVN1-202ENST00000307289 MBIPQ9NS73 344 aa20.92■□□□□ 0.94
SYVN1-202ENST00000307289 ACEP12821 1306 aa20.92■□□□□ 0.94
SYVN1-202ENST00000307289 C1orf115Q9H7X2 142 aa20.91■□□□□ 0.94
SYVN1-202ENST00000307289 DAXXQ9UER7 740 aaPredicted RBP20.91■□□□□ 0.94
SYVN1-202ENST00000307289 VAMP4O75379 141 aa20.91■□□□□ 0.94
SYVN1-202ENST00000307289 C8orf58Q8NAV2 365 aa20.9■□□□□ 0.94
SYVN1-202ENST00000307289 HDGFP51858 240 aaKnown RBP20.9■□□□□ 0.94
SYVN1-202ENST00000307289 ZBTB40Q9NUA8 1239 aa20.9■□□□□ 0.94
SYVN1-202ENST00000307289 CDC42BPGQ6DT37 1551 aa20.9■□□□□ 0.94
SYVN1-202ENST00000307289 KRT24Q2M2I5 525 aa20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms