RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 DESP17661 470 aa15.9■□□□□ 0.14
TRIM56-201ENST00000306085 GRIPAP1Q4V328 841 aa15.89■□□□□ 0.14
TRIM56-201ENST00000306085 RRP1P56182 461 aaKnown RBP15.89■□□□□ 0.13
TRIM56-201ENST00000306085 NFKBIBQ15653 356 aa15.89■□□□□ 0.13
TRIM56-201ENST00000306085 PSMA5P28066 241 aa15.88■□□□□ 0.13
TRIM56-201ENST00000306085 NLRP13Q86W25 1043 aa15.88■□□□□ 0.13
TRIM56-201ENST00000306085 SERPINA10Q9UK55 444 aa15.88■□□□□ 0.13
TRIM56-201ENST00000306085 KIAA1328Q86T90 577 aa15.88■□□□□ 0.13
TRIM56-201ENST00000306085 ARHGAP35Q9NRY4 1499 aa15.88■□□□□ 0.13
TRIM56-201ENST00000306085 DDX19BQ9UMR2 479 aa15.88■□□□□ 0.13
TRIM56-201ENST00000306085 PRDM10Q9NQV6 1147 aa15.87■□□□□ 0.13
TRIM56-201ENST00000306085 FIBPO43427 364 aa15.87■□□□□ 0.13
TRIM56-201ENST00000306085 ATP2B2Q01814 1243 aa15.87■□□□□ 0.13
TRIM56-201ENST00000306085 SETD5Q9C0A6 1442 aa15.87■□□□□ 0.13
TRIM56-201ENST00000306085 KIF15Q9NS87 1388 aa15.87■□□□□ 0.13
TRIM56-201ENST00000306085 ZNF396Q96N95 335 aaPredicted RBP15.86■□□□□ 0.13
TRIM56-201ENST00000306085 PSMD1Q99460 953 aa15.86■□□□□ 0.13
TRIM56-201ENST00000306085 MYO15BQ96JP2 1530 aa15.86■□□□□ 0.13
TRIM56-201ENST00000306085 DDX58O95786 925 aaKnown RBP15.86■□□□□ 0.13
TRIM56-201ENST00000306085 JAKMIP3Q5VZ66 844 aa15.86■□□□□ 0.13
TRIM56-201ENST00000306085 RNF187Q5TA31 235 aaPredicted RBP15.86■□□□□ 0.13
TRIM56-201ENST00000306085 GOPCQ9HD26 462 aa15.86■□□□□ 0.13
TRIM56-201ENST00000306085 TRAK2O60296 914 aa15.86■□□□□ 0.13
TRIM56-201ENST00000306085 STK38Q15208 465 aa15.85■□□□□ 0.13
TRIM56-201ENST00000306085 ZWINTO95229 277 aa15.85■□□□□ 0.13
TRIM56-201ENST00000306085 CRACR2AQ9BSW2 395 aa15.85■□□□□ 0.13
TRIM56-201ENST00000306085 FKBP5Q13451 457 aaPredicted RBP15.84■□□□□ 0.13
TRIM56-201ENST00000306085 PRPF40AO75400 957 aaKnown RBP15.84■□□□□ 0.13
TRIM56-201ENST00000306085 TNMDQ9H2S6 317 aa15.84■□□□□ 0.13
TRIM56-201ENST00000306085 E9PSI1 815 aa15.84■□□□□ 0.13
TRIM56-201ENST00000306085 CCDC175P0C221 793 aa15.84■□□□□ 0.13
TRIM56-201ENST00000306085 SMC1AQ14683 1233 aaKnown RBP15.84■□□□□ 0.13
TRIM56-201ENST00000306085 EID1Q9Y6B2 187 aa15.84■□□□□ 0.13
TRIM56-201ENST00000306085 CCDC192P0DO97 292 aa15.84■□□□□ 0.13
TRIM56-201ENST00000306085 LNPKQ9C0E8 428 aa15.84■□□□□ 0.13
TRIM56-201ENST00000306085 FEZ1Q99689 392 aa15.84■□□□□ 0.13
TRIM56-201ENST00000306085 MBD3O95983 291 aa15.83■□□□□ 0.12
TRIM56-201ENST00000306085 CLGNO14967 610 aa15.83■□□□□ 0.12
TRIM56-201ENST00000306085 SLC3A2P08195 630 aaKnown RBP15.83■□□□□ 0.12
TRIM56-201ENST00000306085 ZFP91Q96JP5 570 aaPredicted RBP15.82■□□□□ 0.12
TRIM56-201ENST00000306085 CNTROBQ8N137 903 aa15.82■□□□□ 0.12
TRIM56-201ENST00000306085 TAF4BQ92750 862 aa15.82■□□□□ 0.12
TRIM56-201ENST00000306085 PDCP20941 246 aa15.82■□□□□ 0.12
TRIM56-201ENST00000306085 ME1P48163 572 aa15.82■□□□□ 0.12
TRIM56-201ENST00000306085 TRERF1Q96PN7 1200 aa15.82■□□□□ 0.12
TRIM56-201ENST00000306085 TMCO5BA8MYB1 307 aa15.81■□□□□ 0.12
TRIM56-201ENST00000306085 COG3Q96JB2 828 aa15.81■□□□□ 0.12
TRIM56-201ENST00000306085 IFFO1Q0D2I5 559 aa15.81■□□□□ 0.12
TRIM56-201ENST00000306085 BMS1Q14692 1282 aaKnown RBP15.81■□□□□ 0.12
TRIM56-201ENST00000306085 DACH1Q9UI36 760 aa15.81■□□□□ 0.12
TRIM56-201ENST00000306085 CCDC148Q8NFR7 591 aa15.81■□□□□ 0.12
TRIM56-201ENST00000306085 DHX8Q14562 1220 aaKnown RBP15.8■□□□□ 0.12
TRIM56-201ENST00000306085 FSD1Q9BTV5 496 aa15.8■□□□□ 0.12
TRIM56-201ENST00000306085 COMMD10Q9Y6G5 202 aa15.8■□□□□ 0.12
TRIM56-201ENST00000306085 GSTTP1A0A1W2PQM5 241 aa15.8■□□□□ 0.12
TRIM56-201ENST00000306085 DZIP1LQ8IYY4 767 aaKnown RBP15.8■□□□□ 0.12
TRIM56-201ENST00000306085 JMYQ8N9B5 988 aa15.8■□□□□ 0.12
TRIM56-201ENST00000306085 CBFA2T2O43439 604 aa15.79■□□□□ 0.12
TRIM56-201ENST00000306085 IL27Q8NEV9 243 aa15.79■□□□□ 0.12
TRIM56-201ENST00000306085 TRIM21P19474 475 aaKnown RBP15.79■□□□□ 0.12
TRIM56-201ENST00000306085 MYBBP1AQ9BQG0 1328 aaKnown RBP15.79■□□□□ 0.12
TRIM56-201ENST00000306085 ERCC6Q03468 1493 aa15.79■□□□□ 0.12
TRIM56-201ENST00000306085 EPB41L2O43491 1005 aaKnown RBP15.79■□□□□ 0.12
TRIM56-201ENST00000306085 PDCL2Q8N4E4 241 aa15.79■□□□□ 0.12
TRIM56-201ENST00000306085 ANKRD18BA2A2Z9 1011 aa15.78■□□□□ 0.12
TRIM56-201ENST00000306085 CEP164Q9UPV0 1460 aa15.78■□□□□ 0.12
TRIM56-201ENST00000306085 FHAD1B1AJZ9 1412 aa15.78■□□□□ 0.12
TRIM56-201ENST00000306085 MAP9Q49MG5 647 aa15.78■□□□□ 0.12
TRIM56-201ENST00000306085 CGNQ9P2M7 1197 aaKnown RBP15.78■□□□□ 0.12
TRIM56-201ENST00000306085 NUP155O75694 1391 aa15.78■□□□□ 0.12
TRIM56-201ENST00000306085 TIGD1Q96MW7 591 aa15.78■□□□□ 0.12
TRIM56-201ENST00000306085 CCDC160A6NGH7 325 aa15.78■□□□□ 0.12
TRIM56-201ENST00000306085 AIMP1Q12904 312 aaKnown RBP15.78■□□□□ 0.12
TRIM56-201ENST00000306085 CDC45O75419 566 aa15.78■□□□□ 0.12
TRIM56-201ENST00000306085 SSBP05455 408 aaKnown RBP eCLIP15.77■□□□□ 0.12
TRIM56-201ENST00000306085 TBC1D2BQ9UPU7 963 aa15.77■□□□□ 0.12
TRIM56-201ENST00000306085 ARHGAP29Q52LW3 1261 aa15.77■□□□□ 0.12
TRIM56-201ENST00000306085 DAAM2Q86T65 1068 aa15.77■□□□□ 0.12
TRIM56-201ENST00000306085 SOGA3Q5TF21 947 aa15.77■□□□□ 0.12
TRIM56-201ENST00000306085 KIF27Q86VH2 1401 aa15.77■□□□□ 0.11
TRIM56-201ENST00000306085 CTNNBL1Q8WYA6 563 aaPredicted RBP15.77■□□□□ 0.11
TRIM56-201ENST00000306085 CBX1P83916 185 aa15.76■□□□□ 0.11
TRIM56-201ENST00000306085 STK3Q13188 491 aa15.76■□□□□ 0.11
TRIM56-201ENST00000306085 RIC3Q7Z5B4 369 aa15.76■□□□□ 0.11
TRIM56-201ENST00000306085 UBE2Q2Q8WVN8 375 aa15.76■□□□□ 0.11
TRIM56-201ENST00000306085 CCDC178Q5BJE1 867 aa15.76■□□□□ 0.11
TRIM56-201ENST00000306085 MICALCLQ6ZW33 695 aa15.76■□□□□ 0.11
TRIM56-201ENST00000306085 LUZP1Q86V48 1076 aa15.76■□□□□ 0.11
TRIM56-201ENST00000306085 GCOM1H8Y6P7 765 aaPredicted RBP15.75■□□□□ 0.11
TRIM56-201ENST00000306085 MYZAPP0CAP1 466 aa15.75■□□□□ 0.11
TRIM56-201ENST00000306085 UBXN4Q92575 508 aa15.75■□□□□ 0.11
TRIM56-201ENST00000306085 EIF5P55010 431 aaKnown RBP15.75■□□□□ 0.11
TRIM56-201ENST00000306085 MACROD2A1Z1Q3 448 aa15.75■□□□□ 0.11
TRIM56-201ENST00000306085 POTEJP0CG39 1038 aa15.75■□□□□ 0.11
TRIM56-201ENST00000306085 POLR3GO15318 223 aaPredicted RBP15.75■□□□□ 0.11
TRIM56-201ENST00000306085 HOOK3Q86VS8 718 aa15.75■□□□□ 0.11
TRIM56-201ENST00000306085 SEPT6Q14141 434 aa15.75■□□□□ 0.11
TRIM56-201ENST00000306085 ZNF397Q8NF99 534 aaPredicted RBP15.75■□□□□ 0.11
TRIM56-201ENST00000306085 TTC16Q8NEE8 873 aa15.74■□□□□ 0.11
TRIM56-201ENST00000306085 NEK4P51957 841 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms