RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 KCNA6P17658 529 aa13.99□□□□□ -0.17
CLP1-201ENST00000302731 GOLGA2Q08379 1002 aa13.99□□□□□ -0.17
CLP1-201ENST00000302731 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.99□□□□□ -0.17
CLP1-201ENST00000302731 NPHP4O75161 1426 aaPredicted RBP13.98□□□□□ -0.17
CLP1-201ENST00000302731 CDCA7LQ96GN5 454 aa13.98□□□□□ -0.17
CLP1-201ENST00000302731 IQSEC2Q5JU85 1478 aa13.98□□□□□ -0.17
CLP1-201ENST00000302731 USP6P35125 1406 aa13.98□□□□□ -0.17
CLP1-201ENST00000302731 CCDC146Q8IYE0 955 aa13.97□□□□□ -0.17
CLP1-201ENST00000302731 RCAN3Q9UKA8 241 aa13.97□□□□□ -0.17
CLP1-201ENST00000302731 NKTRP30414 1462 aaKnown RBP13.97□□□□□ -0.17
CLP1-201ENST00000302731 ACEP12821 1306 aa13.97□□□□□ -0.17
CLP1-201ENST00000302731 NCKAP5LQ9HCH0 1330 aa13.97□□□□□ -0.17
CLP1-201ENST00000302731 SSH2Q76I76 1423 aa13.96□□□□□ -0.17
CLP1-201ENST00000302731 CCDC27Q2M243 656 aa13.96□□□□□ -0.17
CLP1-201ENST00000302731 TRMT2AQ8IZ69 625 aaKnown RBP13.96□□□□□ -0.17
CLP1-201ENST00000302731 COG3Q96JB2 828 aa13.96□□□□□ -0.17
CLP1-201ENST00000302731 FMN2Q9NZ56 1722 aa13.95□□□□□ -0.18
CLP1-201ENST00000302731 TTC21BQ7Z4L5 1316 aa13.95□□□□□ -0.18
CLP1-201ENST00000302731 TTC21AQ8NDW8 1320 aa13.95□□□□□ -0.18
CLP1-201ENST00000302731 SLFN5Q08AF3 891 aa13.95□□□□□ -0.18
CLP1-201ENST00000302731 DUSP27Q5VZP5 1158 aa13.95□□□□□ -0.18
CLP1-201ENST00000302731 NME9Q86XW9 330 aa13.95□□□□□ -0.18
CLP1-201ENST00000302731 PHF23Q9BUL5 403 aaPredicted RBP13.95□□□□□ -0.18
CLP1-201ENST00000302731 PNNQ9H307 717 aaKnown RBP13.95□□□□□ -0.18
CLP1-201ENST00000302731 PPP4R2Q9NY27 417 aa13.95□□□□□ -0.18
CLP1-201ENST00000302731 POLKQ9UBT6 870 aa13.95□□□□□ -0.18
CLP1-201ENST00000302731 CDK12Q9NYV4 1490 aaPredicted RBP13.94□□□□□ -0.18
CLP1-201ENST00000302731 E9PSI1 815 aa13.94□□□□□ -0.18
CLP1-201ENST00000302731 DIAPH1O60610 1272 aaKnown RBP13.94□□□□□ -0.18
CLP1-201ENST00000302731 U2AF1L5P0DN76 240 aaPredicted RBP13.94□□□□□ -0.18
CLP1-201ENST00000302731 U2AF1Q01081 240 aaKnown RBP eCLIP13.94□□□□□ -0.18
CLP1-201ENST00000302731 NWD1Q149M9 1564 aa13.94□□□□□ -0.18
CLP1-201ENST00000302731 OVOS2A0A0J9YW53 1432 aa13.94□□□□□ -0.18
CLP1-201ENST00000302731 OVOS2Q6IE36 1432 aa13.94□□□□□ -0.18
CLP1-201ENST00000302731 MAP2P11137 1827 aaKnown RBP13.93□□□□□ -0.18
CLP1-201ENST00000302731 RRP1P56182 461 aaKnown RBP13.93□□□□□ -0.18
CLP1-201ENST00000302731 WWC1Q8IX03 1113 aa13.93□□□□□ -0.18
CLP1-201ENST00000302731 TCP11L2Q8N4U5 519 aa13.93□□□□□ -0.18
CLP1-201ENST00000302731 IRX6P78412 446 aaPredicted RBP13.92□□□□□ -0.18
CLP1-201ENST00000302731 USP31Q70CQ4 1352 aa13.92□□□□□ -0.18
CLP1-201ENST00000302731 ADGRL3Q9HAR2 1447 aa13.91□□□□□ -0.18
CLP1-201ENST00000302731 NALCNQ8IZF0 1738 aa13.91□□□□□ -0.18
CLP1-201ENST00000302731 WDR63Q8IWG1 891 aa13.91□□□□□ -0.18
CLP1-201ENST00000302731 PLEKHF1Q96S99 279 aa13.91□□□□□ -0.18
CLP1-201ENST00000302731 FCHSD2O94868 740 aa13.9□□□□□ -0.18
CLP1-201ENST00000302731 NUTM2FA1L443 756 aa13.9□□□□□ -0.19
CLP1-201ENST00000302731 U2SURPO15042 1029 aaKnown RBP13.9□□□□□ -0.19
CLP1-201ENST00000302731 RGPD8O14715 1765 aaPredicted RBP13.89□□□□□ -0.19
CLP1-201ENST00000302731 NGDNQ8NEJ9 315 aaKnown RBP13.89□□□□□ -0.19
CLP1-201ENST00000302731 LRRC7Q96NW7 1537 aa13.89□□□□□ -0.19
CLP1-201ENST00000302731 ZRANB1Q9UGI0 708 aa13.88□□□□□ -0.19
CLP1-201ENST00000302731 USP54Q70EL1 1684 aa13.87□□□□□ -0.19
CLP1-201ENST00000302731 EMILIN1Q9Y6C2 1016 aa13.87□□□□□ -0.19
CLP1-201ENST00000302731 MAPK8IP3Q9UPT6 1336 aa13.87□□□□□ -0.19
CLP1-201ENST00000302731 IL13P35225 146 aa13.86□□□□□ -0.19
CLP1-201ENST00000302731 PMFBP1Q8TBY8 1022 aa13.86□□□□□ -0.19
CLP1-201ENST00000302731 SPINK5Q9NQ38 1064 aaPredicted RBP13.86□□□□□ -0.19
CLP1-201ENST00000302731 PPM1GO15355 546 aaPredicted RBP13.85□□□□□ -0.19
CLP1-201ENST00000302731 FBLN1P23142 703 aa13.85□□□□□ -0.19
CLP1-201ENST00000302731 TMPOP42166 694 aaKnown RBP13.85□□□□□ -0.19
CLP1-201ENST00000302731 RSPH6AQ9H0K4 717 aa13.85□□□□□ -0.19
CLP1-201ENST00000302731 NEFMP07197 916 aa13.84□□□□□ -0.19
CLP1-201ENST00000302731 RRP7AQ9Y3A4 280 aaKnown RBP13.84□□□□□ -0.19
CLP1-201ENST00000302731 IL16Q14005 1332 aa13.84□□□□□ -0.19
CLP1-201ENST00000302731 PIK3C2AO00443 1686 aa13.84□□□□□ -0.19
CLP1-201ENST00000302731 NCOA3Q9Y6Q9 1424 aa13.84□□□□□ -0.19
CLP1-201ENST00000302731 RRS1Q15050 365 aaKnown RBP13.83□□□□□ -0.2
CLP1-201ENST00000302731 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.83□□□□□ -0.2
CLP1-201ENST00000302731 MYH16Q9H6N6 1097 aa13.83□□□□□ -0.2
CLP1-201ENST00000302731 PHF8Q9UPP1 1060 aa13.83□□□□□ -0.2
CLP1-201ENST00000302731 DMRT2Q9Y5R5 561 aa13.83□□□□□ -0.2
CLP1-201ENST00000302731 KIF24Q5T7B8 1368 aa13.83□□□□□ -0.2
CLP1-201ENST00000302731 NEUROD2Q15784 382 aa13.82□□□□□ -0.2
CLP1-201ENST00000302731 PRKAR2BP31323 418 aa13.81□□□□□ -0.2
CLP1-201ENST00000302731 TRIM35Q9UPQ4 493 aa13.81□□□□□ -0.2
CLP1-201ENST00000302731 SBNO1A3KN83 1393 aa13.8□□□□□ -0.2
CLP1-201ENST00000302731 CT47B1P0C2W7 299 aaPredicted RBP13.8□□□□□ -0.2
CLP1-201ENST00000302731 FLT4P35916 1363 aa13.79□□□□□ -0.2
CLP1-201ENST00000302731 RIPK4P57078 832 aa13.79□□□□□ -0.2
CLP1-201ENST00000302731 PROSER2Q86WR7 435 aaPredicted RBP13.79□□□□□ -0.2
CLP1-201ENST00000302731 PEAK1Q9H792 1746 aa13.79□□□□□ -0.2
CLP1-201ENST00000302731 DCCP43146 1447 aa13.79□□□□□ -0.2
CLP1-201ENST00000302731 NLRP6P59044 892 aa13.79□□□□□ -0.2
CLP1-201ENST00000302731 NFE2L2Q16236 605 aa13.79□□□□□ -0.2
CLP1-201ENST00000302731 C14orf37Q86TY3 774 aa13.79□□□□□ -0.2
CLP1-201ENST00000302731 C19orf44Q9H6X5 657 aa13.79□□□□□ -0.2
CLP1-201ENST00000302731 MARF1Q9Y4F3 1742 aaKnown RBP13.79□□□□□ -0.2
CLP1-201ENST00000302731 RGPD1P0DJD0 1748 aa13.78□□□□□ -0.2
CLP1-201ENST00000302731 MAP3K19Q56UN5 1328 aa13.78□□□□□ -0.2
CLP1-201ENST00000302731 EIF4A2Q14240 407 aaKnown RBP13.78□□□□□ -0.2
CLP1-201ENST00000302731 B4GALNT3Q6L9W6 998 aa13.78□□□□□ -0.2
CLP1-201ENST00000302731 CALD1Q05682 793 aaKnown RBP13.77□□□□□ -0.21
CLP1-201ENST00000302731 ESCO1Q5FWF5 840 aa13.77□□□□□ -0.21
CLP1-201ENST00000302731 CCDC136Q96JN2 1154 aa13.77□□□□□ -0.21
CLP1-201ENST00000302731 KIF1AQ12756 1690 aa13.77□□□□□ -0.21
CLP1-201ENST00000302731 HMOX1P09601 288 aa13.76□□□□□ -0.21
CLP1-201ENST00000302731 LMOD3Q0VAK6 560 aa13.76□□□□□ -0.21
CLP1-201ENST00000302731 AEBP2Q6ZN18 517 aaPredicted RBP13.76□□□□□ -0.21
CLP1-201ENST00000302731 ABTB2Q8N961 1025 aa13.76□□□□□ -0.21
CLP1-201ENST00000302731 EXOC6Q8TAG9 804 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms