RNA–Protein interactions for RNA: ENST00000302279.7

FNTA-201, Transcript of farnesyltransferase, CAAX box, alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNTA, Length 1,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNTA-201ENST00000302279 RGPD8O14715 1765 aaPredicted RBP31.32■■■□□ 2.6
FNTA-201ENST00000302279 NWD1Q149M9 1564 aa31.31■■■□□ 2.6
FNTA-201ENST00000302279 USP6P35125 1406 aa31.31■■■□□ 2.6
FNTA-201ENST00000302279 ZNF521Q96K83 1311 aa31.29■■■□□ 2.6
FNTA-201ENST00000302279 PNPLA6Q8IY17 1366 aa31.28■■■□□ 2.6
FNTA-201ENST00000302279 APAF1O14727 1248 aa31.26■■■□□ 2.6
FNTA-201ENST00000302279 SSH2Q76I76 1423 aa31.26■■■□□ 2.59
FNTA-201ENST00000302279 TTC21BQ7Z4L5 1316 aa31.26■■■□□ 2.59
FNTA-201ENST00000302279 NGEFQ8N5V2 710 aa31.26■■■□□ 2.59
FNTA-201ENST00000302279 CDCA7LQ96GN5 454 aa31.26■■■□□ 2.59
FNTA-201ENST00000302279 AATKQ6ZMQ8 1374 aa31.25■■■□□ 2.59
FNTA-201ENST00000302279 ADGRL3Q9HAR2 1447 aa31.25■■■□□ 2.59
FNTA-201ENST00000302279 COG3Q96JB2 828 aa31.24■■■□□ 2.59
FNTA-201ENST00000302279 ZRANB1Q9UGI0 708 aa31.24■■■□□ 2.59
FNTA-201ENST00000302279 MAP2P11137 1827 aaKnown RBP31.24■■■□□ 2.59
FNTA-201ENST00000302279 IQSEC2Q5JU85 1478 aa31.24■■■□□ 2.59
FNTA-201ENST00000302279 RUNDC1Q96C34 613 aa31.22■■■□□ 2.59
FNTA-201ENST00000302279 POLKQ9UBT6 870 aa31.22■■■□□ 2.59
FNTA-201ENST00000302279 RNF123Q5XPI4 1314 aa31.22■■■□□ 2.59
FNTA-201ENST00000302279 OVOS2A0A0J9YW53 1432 aa31.2■■■□□ 2.59
FNTA-201ENST00000302279 OVOS2Q6IE36 1432 aa31.2■■■□□ 2.59
FNTA-201ENST00000302279 PMFBP1Q8TBY8 1022 aa31.19■■■□□ 2.58
FNTA-201ENST00000302279 U2AF1L5P0DN76 240 aaPredicted RBP31.19■■■□□ 2.58
FNTA-201ENST00000302279 U2AF1Q01081 240 aaKnown RBP eCLIP31.19■■■□□ 2.58
FNTA-201ENST00000302279 CDK12Q9NYV4 1490 aaPredicted RBP31.19■■■□□ 2.58
FNTA-201ENST00000302279 TTC21AQ8NDW8 1320 aa31.17■■■□□ 2.58
FNTA-201ENST00000302279 DIAPH1O60610 1272 aaKnown RBP31.17■■■□□ 2.58
FNTA-201ENST00000302279 NGDNQ8NEJ9 315 aaKnown RBP31.17■■■□□ 2.58
FNTA-201ENST00000302279 FBLN1P23142 703 aa31.16■■■□□ 2.58
FNTA-201ENST00000302279 IRX6P78412 446 aaPredicted RBP31.15■■■□□ 2.58
FNTA-201ENST00000302279 GOLGA2Q08379 1002 aa31.15■■■□□ 2.58
FNTA-201ENST00000302279 KDM4FA0A1W2PPD8 638 aa31.14■■■□□ 2.58
FNTA-201ENST00000302279 ERICH6BQ5W0A0 696 aa31.14■■■□□ 2.58
FNTA-201ENST00000302279 RBM33Q96EV2 1170 aaKnown RBP31.13■■■□□ 2.57
FNTA-201ENST00000302279 U2SURPO15042 1029 aaKnown RBP31.12■■■□□ 2.57
FNTA-201ENST00000302279 EMILIN1Q9Y6C2 1016 aa31.12■■■□□ 2.57
FNTA-201ENST00000302279 TCP11L2Q8N4U5 519 aa31.12■■■□□ 2.57
FNTA-201ENST00000302279 RCAN3Q9UKA8 241 aa31.11■■■□□ 2.57
FNTA-201ENST00000302279 USP31Q70CQ4 1352 aa31.1■■■□□ 2.57
FNTA-201ENST00000302279 PPM1GO15355 546 aaPredicted RBP31.1■■■□□ 2.57
FNTA-201ENST00000302279 DUSP27Q5VZP5 1158 aa31.1■■■□□ 2.57
FNTA-201ENST00000302279 NCBP3Q53F19 620 aaKnown RBP31.09■■■□□ 2.57
FNTA-201ENST00000302279 PIK3C2AO00443 1686 aa31.09■■■□□ 2.57
FNTA-201ENST00000302279 SLFN5Q08AF3 891 aa31.08■■■□□ 2.57
FNTA-201ENST00000302279 TRMT2AQ8IZ69 625 aaKnown RBP31.07■■■□□ 2.56
FNTA-201ENST00000302279 PHF23Q9BUL5 403 aaPredicted RBP31.07■■■□□ 2.56
FNTA-201ENST00000302279 WWC1Q8IX03 1113 aa31.06■■■□□ 2.56
FNTA-201ENST00000302279 PLEKHF1Q96S99 279 aa31.06■■■□□ 2.56
FNTA-201ENST00000302279 RRS1Q15050 365 aaKnown RBP31.05■■■□□ 2.56
FNTA-201ENST00000302279 PHF8Q9UPP1 1060 aa31.05■■■□□ 2.56
FNTA-201ENST00000302279 USP54Q70EL1 1684 aa31.05■■■□□ 2.56
FNTA-201ENST00000302279 HSPA2P54652 639 aa31.05■■■□□ 2.56
FNTA-201ENST00000302279 C14orf37Q86TY3 774 aa31.05■■■□□ 2.56
FNTA-201ENST00000302279 LMTK3Q96Q04 1460 aa31.05■■■□□ 2.56
FNTA-201ENST00000302279 CCDC27Q2M243 656 aa31.04■■■□□ 2.56
FNTA-201ENST00000302279 PROSER2Q86WR7 435 aaPredicted RBP31.03■■■□□ 2.56
FNTA-201ENST00000302279 RRP7AQ9Y3A4 280 aaKnown RBP31.03■■■□□ 2.56
FNTA-201ENST00000302279 LRRC7Q96NW7 1537 aa31.03■■■□□ 2.56
FNTA-201ENST00000302279 E9PSI1 815 aa31.03■■■□□ 2.56
FNTA-201ENST00000302279 STRCP1A6NGW2 1772 aa31.02■■■□□ 2.56
FNTA-201ENST00000302279 IL13P35225 146 aa31.02■■■□□ 2.56
FNTA-201ENST00000302279 PNNQ9H307 717 aaKnown RBP31.01■■■□□ 2.56
FNTA-201ENST00000302279 SPINK5Q9NQ38 1064 aaPredicted RBP31.01■■■□□ 2.56
FNTA-201ENST00000302279 RRP1P56182 461 aaKnown RBP31.01■■■□□ 2.55
FNTA-201ENST00000302279 DMRT2Q9Y5R5 561 aa31.01■■■□□ 2.55
FNTA-201ENST00000302279 MARF1Q9Y4F3 1742 aaKnown RBP31■■■□□ 2.55
FNTA-201ENST00000302279 PEAK1Q9H792 1746 aa30.99■■■□□ 2.55
FNTA-201ENST00000302279 FCHSD2O94868 740 aa30.99■■■□□ 2.55
FNTA-201ENST00000302279 NEUROD2Q15784 382 aa30.99■■■□□ 2.55
FNTA-201ENST00000302279 MAPK8IP3Q9UPT6 1336 aa30.98■■■□□ 2.55
FNTA-201ENST00000302279 WDR63Q8IWG1 891 aa30.96■■■□□ 2.55
FNTA-201ENST00000302279 RSPH6AQ9H0K4 717 aa30.96■■■□□ 2.55
FNTA-201ENST00000302279 ESCO1Q5FWF5 840 aa30.95■■■□□ 2.55
FNTA-201ENST00000302279 STRCQ7RTU9 1775 aa30.94■■■□□ 2.54
FNTA-201ENST00000302279 NCOA3Q9Y6Q9 1424 aa30.94■■■□□ 2.54
FNTA-201ENST00000302279 TMPOP42166 694 aaKnown RBP30.94■■■□□ 2.54
FNTA-201ENST00000302279 PPP4R2Q9NY27 417 aa30.94■■■□□ 2.54
FNTA-201ENST00000302279 C19orf44Q9H6X5 657 aa30.93■■■□□ 2.54
FNTA-201ENST00000302279 NLRP6P59044 892 aa30.91■■■□□ 2.54
FNTA-201ENST00000302279 TMEM94Q12767 1356 aa30.91■■■□□ 2.54
FNTA-201ENST00000302279 PRKAR2BP31323 418 aa30.91■■■□□ 2.54
FNTA-201ENST00000302279 DCCP43146 1447 aa30.89■■■□□ 2.54
FNTA-201ENST00000302279 KIF1AQ12756 1690 aa30.89■■■□□ 2.54
FNTA-201ENST00000302279 MAP3K19Q56UN5 1328 aa30.89■■■□□ 2.54
FNTA-201ENST00000302279 C1orf167Q5SNV9 1468 aa30.89■■■□□ 2.54
FNTA-201ENST00000302279 SBNO1A3KN83 1393 aa30.88■■■□□ 2.53
FNTA-201ENST00000302279 ABTB2Q8N961 1025 aa30.88■■■□□ 2.53
FNTA-201ENST00000302279 SOX12O15370 315 aa30.87■■■□□ 2.53
FNTA-201ENST00000302279 PAK3O75914 559 aaPredicted RBP30.87■■■□□ 2.53
FNTA-201ENST00000302279 HMOX1P09601 288 aa30.87■■■□□ 2.53
FNTA-201ENST00000302279 EIF4A2Q14240 407 aaKnown RBP30.87■■■□□ 2.53
FNTA-201ENST00000302279 ORAI2Q96SN7 254 aa30.87■■■□□ 2.53
FNTA-201ENST00000302279 RGPD1P0DJD0 1748 aa30.86■■■□□ 2.53
FNTA-201ENST00000302279 FLT4P35916 1363 aa30.86■■■□□ 2.53
FNTA-201ENST00000302279 TRIM35Q9UPQ4 493 aa30.86■■■□□ 2.53
FNTA-201ENST00000302279 PSME1Q06323 249 aa30.85■■■□□ 2.53
FNTA-201ENST00000302279 NEFMP07197 916 aa30.84■■■□□ 2.53
FNTA-201ENST00000302279 HSP90AB2PQ58FF8 381 aa30.84■■■□□ 2.53
FNTA-201ENST00000302279 PELP1Q8IZL8 1130 aaKnown RBP30.84■■■□□ 2.53
FNTA-201ENST00000302279 NUTM2GQ5VZR2 741 aa30.83■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms