RNA–Protein interactions for RNA: ENST00000302273.2

VPREB1-201, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene VPREB1, Length 626 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-201ENST00000302273 A0A1W2PP64 1363 aa12.17□□□□□ -0.46
VPREB1-201ENST00000302273 TTC21BQ7Z4L5 1316 aa12.16□□□□□ -0.46
VPREB1-201ENST00000302273 ZNF316A6NFI3 1004 aaPredicted RBP12.16□□□□□ -0.46
VPREB1-201ENST00000302273 ABTB2Q8N961 1025 aa12.16□□□□□ -0.46
VPREB1-201ENST00000302273 PANK3Q9H999 370 aa12.16□□□□□ -0.46
VPREB1-201ENST00000302273 USP31Q70CQ4 1352 aa12.16□□□□□ -0.46
VPREB1-201ENST00000302273 CGNL1Q0VF96 1302 aa12.15□□□□□ -0.46
VPREB1-201ENST00000302273 PAK3O75914 559 aaPredicted RBP12.15□□□□□ -0.46
VPREB1-201ENST00000302273 KCNH5Q8NCM2 988 aa12.15□□□□□ -0.46
VPREB1-201ENST00000302273 DDX17Q92841 729 aaKnown RBP12.15□□□□□ -0.46
VPREB1-201ENST00000302273 POLR3GLQ9BT43 218 aa12.14□□□□□ -0.47
VPREB1-201ENST00000302273 CARD14Q9BXL6 1004 aa12.14□□□□□ -0.47
VPREB1-201ENST00000302273 KNSTRNQ9Y448 316 aa12.14□□□□□ -0.47
VPREB1-201ENST00000302273 NSD2O96028 1365 aa12.14□□□□□ -0.47
VPREB1-201ENST00000302273 PNPLA6Q8IY17 1366 aa12.14□□□□□ -0.47
VPREB1-201ENST00000302273 NPC1L1Q9UHC9 1359 aa12.14□□□□□ -0.47
VPREB1-201ENST00000302273 MED1Q15648 1581 aaPredicted RBP12.13□□□□□ -0.47
VPREB1-201ENST00000302273 COL16A1Q07092 1604 aaPredicted RBP12.13□□□□□ -0.47
VPREB1-201ENST00000302273 PER1O15534 1290 aaPredicted RBP12.13□□□□□ -0.47
VPREB1-201ENST00000302273 XPCQ01831 940 aaPredicted RBP12.13□□□□□ -0.47
VPREB1-201ENST00000302273 RGS17Q9UGC6 210 aaPredicted RBP12.13□□□□□ -0.47
VPREB1-201ENST00000302273 FYB1O15117 783 aa12.12□□□□□ -0.47
VPREB1-201ENST00000302273 NLRP6P59044 892 aa12.12□□□□□ -0.47
VPREB1-201ENST00000302273 USP19O94966 1318 aa12.11□□□□□ -0.47
VPREB1-201ENST00000302273 COG3Q96JB2 828 aa12.11□□□□□ -0.47
VPREB1-201ENST00000302273 PHLPP1O60346 1717 aa12.11□□□□□ -0.47
VPREB1-201ENST00000302273 RGPD8O14715 1765 aaPredicted RBP12.1□□□□□ -0.47
VPREB1-201ENST00000302273 LMOD2Q6P5Q4 547 aa12.1□□□□□ -0.47
VPREB1-201ENST00000302273 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.1□□□□□ -0.47
VPREB1-201ENST00000302273 GCP02774 474 aa12.09□□□□□ -0.47
VPREB1-201ENST00000302273 CPDO75976 1380 aa12.08□□□□□ -0.48
VPREB1-201ENST00000302273 HAP1P54257 671 aaPredicted RBP12.08□□□□□ -0.48
VPREB1-201ENST00000302273 AMER1Q5JTC6 1135 aaPredicted RBP12.08□□□□□ -0.48
VPREB1-201ENST00000302273 NSD3Q9BZ95 1437 aa12.08□□□□□ -0.48
VPREB1-201ENST00000302273 COL22A1Q8NFW1 1626 aaPredicted RBP12.08□□□□□ -0.48
VPREB1-201ENST00000302273 KIF24Q5T7B8 1368 aa12.07□□□□□ -0.48
VPREB1-201ENST00000302273 MON2Q7Z3U7 1717 aa12.07□□□□□ -0.48
VPREB1-201ENST00000302273 NME9Q86XW9 330 aa12.07□□□□□ -0.48
VPREB1-201ENST00000302273 PHF23Q9BUL5 403 aaPredicted RBP12.07□□□□□ -0.48
VPREB1-201ENST00000302273 TRPM3Q9HCF6 1732 aaPredicted RBP12.07□□□□□ -0.48
VPREB1-201ENST00000302273 AKAP12Q02952 1782 aa12.07□□□□□ -0.48
VPREB1-201ENST00000302273 SHPRHQ149N8 1683 aa12.06□□□□□ -0.48
VPREB1-201ENST00000302273 AATKQ6ZMQ8 1374 aa12.06□□□□□ -0.48
VPREB1-201ENST00000302273 OVOS2A0A0J9YW53 1432 aa12.06□□□□□ -0.48
VPREB1-201ENST00000302273 OVOS2Q6IE36 1432 aa12.06□□□□□ -0.48
VPREB1-201ENST00000302273 FNBP4Q8N3X1 1017 aaPredicted RBP12.05□□□□□ -0.48
VPREB1-201ENST00000302273 MYOM1P52179 1685 aa12.05□□□□□ -0.48
VPREB1-201ENST00000302273 ALS2Q96Q42 1657 aa12.05□□□□□ -0.48
VPREB1-201ENST00000302273 NRKQ7Z2Y5 1582 aa12.05□□□□□ -0.48
VPREB1-201ENST00000302273 DDX10Q13206 875 aaKnown RBP12.04□□□□□ -0.48
VPREB1-201ENST00000302273 POTEAQ6S8J7 498 aa12.04□□□□□ -0.48
VPREB1-201ENST00000302273 ARHGEF25Q86VW2 580 aa12.04□□□□□ -0.48
VPREB1-201ENST00000302273 GGNBP2Q9H3C7 697 aa12.04□□□□□ -0.48
VPREB1-201ENST00000302273 SLIT3O75094 1523 aa12.03□□□□□ -0.48
VPREB1-201ENST00000302273 MORC1Q86VD1 984 aa12.03□□□□□ -0.48
VPREB1-201ENST00000302273 NUTM2BA6NNL0 878 aaPredicted RBP12.02□□□□□ -0.49
VPREB1-201ENST00000302273 NUTM2EB1AL46 878 aaPredicted RBP12.02□□□□□ -0.49
VPREB1-201ENST00000302273 RALBP1Q15311 655 aa12.02□□□□□ -0.49
VPREB1-201ENST00000302273 NUTM2GQ5VZR2 741 aa12.02□□□□□ -0.49
VPREB1-201ENST00000302273 ZNF772Q68DY9 489 aaPredicted RBP12.02□□□□□ -0.49
VPREB1-201ENST00000302273 NUTM2AQ8IVF1 878 aaPredicted RBP12.02□□□□□ -0.49
VPREB1-201ENST00000302273 CABLES1Q8TDN4 633 aa12.02□□□□□ -0.49
VPREB1-201ENST00000302273 NGLY1Q96IV0 654 aa12.02□□□□□ -0.49
VPREB1-201ENST00000302273 PRDM11Q9NQV5 511 aa12.02□□□□□ -0.49
VPREB1-201ENST00000302273 USP54Q70EL1 1684 aa12.02□□□□□ -0.49
VPREB1-201ENST00000302273 FAM83GA6ND36 823 aa12.01□□□□□ -0.49
VPREB1-201ENST00000302273 MEX3CQ5U5Q3 659 aaKnown RBP12.01□□□□□ -0.49
VPREB1-201ENST00000302273 ABCC6O95255 1503 aa12.01□□□□□ -0.49
VPREB1-201ENST00000302273 RTL1A6NKG5 1358 aa12□□□□□ -0.49
VPREB1-201ENST00000302273 KIAA0232Q92628 1395 aa12□□□□□ -0.49
VPREB1-201ENST00000302273 SRCAPQ6ZRS2 3230 aa12□□□□□ -0.49
VPREB1-201ENST00000302273 PIK3C2AO00443 1686 aa12□□□□□ -0.49
VPREB1-201ENST00000302273 ADAMTS2O95450 1211 aa11.99□□□□□ -0.49
VPREB1-201ENST00000302273 ZC3H6P61129 1189 aaKnown RBP11.99□□□□□ -0.49
VPREB1-201ENST00000302273 IP6K1Q92551 441 aa11.99□□□□□ -0.49
VPREB1-201ENST00000302273 ZRANB1Q9UGI0 708 aa11.99□□□□□ -0.49
VPREB1-201ENST00000302273 BLMP54132 1417 aaPredicted RBP11.98□□□□□ -0.49
VPREB1-201ENST00000302273 UNC5CLQ8IV45 518 aa11.98□□□□□ -0.49
VPREB1-201ENST00000302273 SLIT2O94813 1529 aa11.97□□□□□ -0.49
VPREB1-201ENST00000302273 INSRP06213 1382 aa11.97□□□□□ -0.49
VPREB1-201ENST00000302273 MAP3K19Q56UN5 1328 aa11.97□□□□□ -0.49
VPREB1-201ENST00000302273 AMPHP49418 695 aa11.97□□□□□ -0.49
VPREB1-201ENST00000302273 CC2D1BQ5T0F9 858 aaKnown RBP11.97□□□□□ -0.49
VPREB1-201ENST00000302273 C8orf37Q96NL8 207 aa11.97□□□□□ -0.49
VPREB1-201ENST00000302273 POLKQ9UBT6 870 aa11.97□□□□□ -0.49
VPREB1-201ENST00000302273 LRP6O75581 1613 aa11.97□□□□□ -0.49
VPREB1-201ENST00000302273 NFAT5O94916 1531 aa11.96□□□□□ -0.49
VPREB1-201ENST00000302273 FLT4P35916 1363 aa11.96□□□□□ -0.49
VPREB1-201ENST00000302273 PARD3Q8TEW0 1356 aa11.96□□□□□ -0.49
VPREB1-201ENST00000302273 EVA1CP58658 441 aa11.96□□□□□ -0.49
VPREB1-201ENST00000302273 USP21Q9UK80 565 aa11.96□□□□□ -0.49
VPREB1-201ENST00000302273 TRPC5Q9UL62 973 aaPredicted RBP11.96□□□□□ -0.49
VPREB1-201ENST00000302273 HOXC9P31274 260 aa11.95□□□□□ -0.5
VPREB1-201ENST00000302273 VPS72Q15906 364 aa11.95□□□□□ -0.5
VPREB1-201ENST00000302273 BTG4Q9NY30 223 aa11.95□□□□□ -0.5
VPREB1-201ENST00000302273 THRAP3Q9Y2W1 955 aaKnown RBP11.95□□□□□ -0.5
VPREB1-201ENST00000302273 SMG6Q86US8 1419 aaKnown RBP11.94□□□□□ -0.5
VPREB1-201ENST00000302273 AFF2P51816 1311 aa11.94□□□□□ -0.5
VPREB1-201ENST00000302273 BCL9LQ86UU0 1499 aa11.94□□□□□ -0.5
VPREB1-201ENST00000302273 CRYBG1Q9Y4K1 1723 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms