RNA–Protein interactions for RNA: ENST00000299300.10

CCT2-201, Transcript of chaperonin containing TCP1 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT2, Length 2,041 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT2-201ENST00000299300 PRAM1Q96QH2 718 aa17.91■□□□□ 0.46
CCT2-201ENST00000299300 GGNBP2Q9H3C7 697 aa17.91■□□□□ 0.46
CCT2-201ENST00000299300 SLC4A3P48751 1232 aa17.9■□□□□ 0.46
CCT2-201ENST00000299300 MVPQ14764 893 aaKnown RBP17.9■□□□□ 0.46
CCT2-201ENST00000299300 MINK1Q8N4C8 1332 aaPredicted RBP17.9■□□□□ 0.46
CCT2-201ENST00000299300 SPATA31D1Q6ZQQ2 1576 aa17.9■□□□□ 0.46
CCT2-201ENST00000299300 ZKSCAN2Q63HK3 967 aa17.89■□□□□ 0.46
CCT2-201ENST00000299300 PPP6R1Q9UPN7 881 aa17.89■□□□□ 0.46
CCT2-201ENST00000299300 RIMBP3CA6NJZ7 1639 aa17.89■□□□□ 0.45
CCT2-201ENST00000299300 RIMBP3BA6NNM3 1639 aa17.89■□□□□ 0.45
CCT2-201ENST00000299300 RIMBP3Q9UFD9 1639 aa17.89■□□□□ 0.45
CCT2-201ENST00000299300 NFKBIBQ15653 356 aa17.89■□□□□ 0.45
CCT2-201ENST00000299300 ATP7BP35670 1465 aa17.88■□□□□ 0.45
CCT2-201ENST00000299300 RWDD1Q9H446 243 aaPredicted RBP17.88■□□□□ 0.45
CCT2-201ENST00000299300 BCL2L13Q9BXK5 485 aa17.88■□□□□ 0.45
CCT2-201ENST00000299300 DAXXQ9UER7 740 aaPredicted RBP17.88■□□□□ 0.45
CCT2-201ENST00000299300 PDZRN3Q9UPQ7 1066 aa17.88■□□□□ 0.45
CCT2-201ENST00000299300 FBXO31Q5XUX0 539 aaPredicted RBP17.87■□□□□ 0.45
CCT2-201ENST00000299300 POGKQ9P215 609 aa17.87■□□□□ 0.45
CCT2-201ENST00000299300 A2ML1A8K2U0 1454 aa17.87■□□□□ 0.45
CCT2-201ENST00000299300 DIP2BQ9P265 1576 aa17.87■□□□□ 0.45
CCT2-201ENST00000299300 SEC24BO95487 1268 aa17.86■□□□□ 0.45
CCT2-201ENST00000299300 HDGFL2Q7Z4V5 671 aaPredicted RBP17.86■□□□□ 0.45
CCT2-201ENST00000299300 DZIP1LQ8IYY4 767 aaKnown RBP17.86■□□□□ 0.45
CCT2-201ENST00000299300 CDK19Q9BWU1 502 aa17.86■□□□□ 0.45
CCT2-201ENST00000299300 EXOSC9Q06265 439 aaKnown RBP17.86■□□□□ 0.45
CCT2-201ENST00000299300 PNNQ9H307 717 aaKnown RBP17.85■□□□□ 0.45
CCT2-201ENST00000299300 U2SURPO15042 1029 aaKnown RBP17.84■□□□□ 0.45
CCT2-201ENST00000299300 DIAPH1O60610 1272 aaKnown RBP17.84■□□□□ 0.45
CCT2-201ENST00000299300 TSR2Q969E8 191 aaKnown RBP17.84■□□□□ 0.45
CCT2-201ENST00000299300 LRRC7Q96NW7 1537 aa17.84■□□□□ 0.45
CCT2-201ENST00000299300 FAM135BQ49AJ0 1406 aa17.83■□□□□ 0.44
CCT2-201ENST00000299300 NRXN3Q9Y4C0 1643 aa17.83■□□□□ 0.44
CCT2-201ENST00000299300 HDAC1Q13547 482 aaPredicted RBP17.82■□□□□ 0.44
CCT2-201ENST00000299300 SSH1Q8WYL5 1049 aa17.82■□□□□ 0.44
CCT2-201ENST00000299300 PPIP5K1Q6PFW1 1433 aa17.82■□□□□ 0.44
CCT2-201ENST00000299300 MAP2P11137 1827 aaKnown RBP17.82■□□□□ 0.44
CCT2-201ENST00000299300 FCHSD2O94868 740 aa17.82■□□□□ 0.44
CCT2-201ENST00000299300 CABP1Q9NZU7 370 aa17.82■□□□□ 0.44
CCT2-201ENST00000299300 TRIM27P14373 513 aa17.81■□□□□ 0.44
CCT2-201ENST00000299300 SMC4Q9NTJ3 1288 aa17.81■□□□□ 0.44
CCT2-201ENST00000299300 RIMS2Q9UQ26 1411 aa17.81■□□□□ 0.44
CCT2-201ENST00000299300 ATF7IPQ6VMQ6 1270 aa17.81■□□□□ 0.44
CCT2-201ENST00000299300 CPSF1Q10570 1443 aaKnown RBP17.8■□□□□ 0.44
CCT2-201ENST00000299300 KNDC1Q76NI1 1749 aa17.8■□□□□ 0.44
CCT2-201ENST00000299300 BRPF1P55201 1214 aaPredicted RBP17.8■□□□□ 0.44
CCT2-201ENST00000299300 RIPK4P57078 832 aa17.8■□□□□ 0.44
CCT2-201ENST00000299300 DDX19BQ9UMR2 479 aa17.8■□□□□ 0.44
CCT2-201ENST00000299300 FTSJ3Q8IY81 847 aaKnown RBP17.79■□□□□ 0.44
CCT2-201ENST00000299300 ALDH1L2Q3SY69 923 aa17.79■□□□□ 0.44
CCT2-201ENST00000299300 TBC1D32Q96NH3 1257 aa17.79■□□□□ 0.44
CCT2-201ENST00000299300 RSPH6AQ9H0K4 717 aa17.79■□□□□ 0.44
CCT2-201ENST00000299300 POLKQ9UBT6 870 aa17.78■□□□□ 0.44
CCT2-201ENST00000299300 GSE1Q14687 1217 aa17.77■□□□□ 0.44
CCT2-201ENST00000299300 MON2Q7Z3U7 1717 aa17.77■□□□□ 0.44
CCT2-201ENST00000299300 SMC5Q8IY18 1101 aa17.77■□□□□ 0.43
CCT2-201ENST00000299300 KIF16BQ96L93 1317 aa17.76■□□□□ 0.43
CCT2-201ENST00000299300 EDC4Q6P2E9 1401 aaKnown RBP17.76■□□□□ 0.43
CCT2-201ENST00000299300 BECN1Q14457 450 aa17.76■□□□□ 0.43
CCT2-201ENST00000299300 ZNF428Q96B54 188 aa17.76■□□□□ 0.43
CCT2-201ENST00000299300 NOB1Q9ULX3 412 aaKnown RBP17.76■□□□□ 0.43
CCT2-201ENST00000299300 CDK12Q9NYV4 1490 aaPredicted RBP17.76■□□□□ 0.43
CCT2-201ENST00000299300 ZBTB40Q9NUA8 1239 aa17.76■□□□□ 0.43
CCT2-201ENST00000299300 AKAP12Q02952 1782 aa17.75■□□□□ 0.43
CCT2-201ENST00000299300 TSPOAP1O95153 1857 aa17.75■□□□□ 0.43
CCT2-201ENST00000299300 AATKQ6ZMQ8 1374 aa17.75■□□□□ 0.43
CCT2-201ENST00000299300 SENP3Q9H4L4 574 aaPredicted RBP17.74■□□□□ 0.43
CCT2-201ENST00000299300 STAG3Q9UJ98 1225 aa17.74■□□□□ 0.43
CCT2-201ENST00000299300 TECPR2O15040 1411 aa17.74■□□□□ 0.43
CCT2-201ENST00000299300 IPO8O15397 1037 aaKnown RBP17.74■□□□□ 0.43
CCT2-201ENST00000299300 WAPLQ7Z5K2 1190 aa17.74■□□□□ 0.43
CCT2-201ENST00000299300 SIRT1Q96EB6 747 aa17.74■□□□□ 0.43
CCT2-201ENST00000299300 FRAT2O75474 233 aaPredicted RBP17.73■□□□□ 0.43
CCT2-201ENST00000299300 FAM69CQ0P6D2 419 aa17.73■□□□□ 0.43
CCT2-201ENST00000299300 TMEM57Q8N5G2 664 aa17.73■□□□□ 0.43
CCT2-201ENST00000299300 PIK3R4Q99570 1358 aa17.73■□□□□ 0.43
CCT2-201ENST00000299300 NFE2L2Q16236 605 aa17.72■□□□□ 0.43
CCT2-201ENST00000299300 UPF2Q9HAU5 1272 aaKnown RBP17.72■□□□□ 0.43
CCT2-201ENST00000299300 C3P01024 1663 aa17.72■□□□□ 0.43
CCT2-201ENST00000299300 PRKAR2BP31323 418 aa17.72■□□□□ 0.43
CCT2-201ENST00000299300 ITPRIPQ8IWB1 547 aa17.72■□□□□ 0.43
CCT2-201ENST00000299300 ANTXR1Q9H6X2 564 aa17.72■□□□□ 0.43
CCT2-201ENST00000299300 DLG5Q8TDM6 1919 aa17.72■□□□□ 0.43
CCT2-201ENST00000299300 CPS1P31327 1500 aa17.71■□□□□ 0.43
CCT2-201ENST00000299300 WASLO00401 505 aaPredicted RBP17.71■□□□□ 0.43
CCT2-201ENST00000299300 IL13P35225 146 aa17.71■□□□□ 0.43
CCT2-201ENST00000299300 PTCH1Q13635 1447 aa17.71■□□□□ 0.43
CCT2-201ENST00000299300 CYB5RLQ6IPT4 315 aa17.71■□□□□ 0.42
CCT2-201ENST00000299300 ZNF853P0CG23 659 aa17.7■□□□□ 0.42
CCT2-201ENST00000299300 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.69■□□□□ 0.42
CCT2-201ENST00000299300 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.69■□□□□ 0.42
CCT2-201ENST00000299300 ARHGAP45Q92619 1136 aa17.69■□□□□ 0.42
CCT2-201ENST00000299300 ITSN1Q15811 1721 aa17.69■□□□□ 0.42
CCT2-201ENST00000299300 NRKQ7Z2Y5 1582 aa17.69■□□□□ 0.42
CCT2-201ENST00000299300 CALD1Q05682 793 aaKnown RBP17.69■□□□□ 0.42
CCT2-201ENST00000299300 PHACTR3Q96KR7 559 aa17.69■□□□□ 0.42
CCT2-201ENST00000299300 METP08581 1390 aa17.68■□□□□ 0.42
CCT2-201ENST00000299300 VAMP4O75379 141 aa17.68■□□□□ 0.42
CCT2-201ENST00000299300 TBC1D2Q9BYX2 928 aa17.67■□□□□ 0.42
CCT2-201ENST00000299300 IFT57Q9NWB7 429 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms