RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 POGKQ9P215 609 aa12.86□□□□□ -0.35
TNFRSF11B-201ENST00000297350 TNRQ92752 1358 aa12.85□□□□□ -0.35
TNFRSF11B-201ENST00000297350 DAXXQ9UER7 740 aaPredicted RBP12.84□□□□□ -0.35
TNFRSF11B-201ENST00000297350 PRAM1Q96QH2 718 aa12.84□□□□□ -0.35
TNFRSF11B-201ENST00000297350 PLEKHF1Q96S99 279 aa12.83□□□□□ -0.35
TNFRSF11B-201ENST00000297350 NBR1Q14596 966 aa12.83□□□□□ -0.36
TNFRSF11B-201ENST00000297350 ZNF428Q96B54 188 aa12.83□□□□□ -0.36
TNFRSF11B-201ENST00000297350 FYB1O15117 783 aa12.82□□□□□ -0.36
TNFRSF11B-201ENST00000297350 RWDD1Q9H446 243 aaPredicted RBP12.82□□□□□ -0.36
TNFRSF11B-201ENST00000297350 ZKSCAN2Q63HK3 967 aa12.82□□□□□ -0.36
TNFRSF11B-201ENST00000297350 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.82□□□□□ -0.36
TNFRSF11B-201ENST00000297350 CPS1P31327 1500 aa12.81□□□□□ -0.36
TNFRSF11B-201ENST00000297350 NUTM2DQ5VT03 806 aaPredicted RBP12.81□□□□□ -0.36
TNFRSF11B-201ENST00000297350 PANK1Q8TE04 598 aa12.81□□□□□ -0.36
TNFRSF11B-201ENST00000297350 SIRT1Q96EB6 747 aa12.81□□□□□ -0.36
TNFRSF11B-201ENST00000297350 ESF1Q9H501 851 aaKnown RBP12.81□□□□□ -0.36
TNFRSF11B-201ENST00000297350 COG6Q9Y2V7 657 aa12.81□□□□□ -0.36
TNFRSF11B-201ENST00000297350 RRP7AQ9Y3A4 280 aaKnown RBP12.81□□□□□ -0.36
TNFRSF11B-201ENST00000297350 FAM135BQ49AJ0 1406 aa12.81□□□□□ -0.36
TNFRSF11B-201ENST00000297350 PPIP5K1Q6PFW1 1433 aa12.81□□□□□ -0.36
TNFRSF11B-201ENST00000297350 DIAPH1O60610 1272 aaKnown RBP12.81□□□□□ -0.36
TNFRSF11B-201ENST00000297350 TMPOP42166 694 aaKnown RBP12.81□□□□□ -0.36
TNFRSF11B-201ENST00000297350 NEUROD2Q15784 382 aa12.81□□□□□ -0.36
TNFRSF11B-201ENST00000297350 STK26Q9P289 416 aa12.81□□□□□ -0.36
TNFRSF11B-201ENST00000297350 STAG3Q9UJ98 1225 aa12.81□□□□□ -0.36
TNFRSF11B-201ENST00000297350 MINK1Q8N4C8 1332 aaPredicted RBP12.81□□□□□ -0.36
TNFRSF11B-201ENST00000297350 TECPR2O15040 1411 aa12.81□□□□□ -0.36
TNFRSF11B-201ENST00000297350 EDC4Q6P2E9 1401 aaKnown RBP12.81□□□□□ -0.36
TNFRSF11B-201ENST00000297350 FCHSD2O94868 740 aa12.8□□□□□ -0.36
TNFRSF11B-201ENST00000297350 IGHDP01880 384 aa12.8□□□□□ -0.36
TNFRSF11B-201ENST00000297350 MVPQ14764 893 aaKnown RBP12.8□□□□□ -0.36
TNFRSF11B-201ENST00000297350 RGS3P49796 1198 aa12.8□□□□□ -0.36
TNFRSF11B-201ENST00000297350 MLECQ14165 292 aa12.8□□□□□ -0.36
TNFRSF11B-201ENST00000297350 FRAT1Q92837 279 aaPredicted RBP12.8□□□□□ -0.36
TNFRSF11B-201ENST00000297350 CDK19Q9BWU1 502 aa12.8□□□□□ -0.36
TNFRSF11B-201ENST00000297350 SLIT1O75093 1534 aa12.8□□□□□ -0.36
TNFRSF11B-201ENST00000297350 CALD1Q05682 793 aaKnown RBP12.79□□□□□ -0.36
TNFRSF11B-201ENST00000297350 KIF16BQ96L93 1317 aa12.79□□□□□ -0.36
TNFRSF11B-201ENST00000297350 MON2Q7Z3U7 1717 aa12.79□□□□□ -0.36
TNFRSF11B-201ENST00000297350 CDK12Q9NYV4 1490 aaPredicted RBP12.79□□□□□ -0.36
TNFRSF11B-201ENST00000297350 HDGFP51858 240 aaKnown RBP12.79□□□□□ -0.36
TNFRSF11B-201ENST00000297350 GGNBP2Q9H3C7 697 aa12.79□□□□□ -0.36
TNFRSF11B-201ENST00000297350 AATKQ6ZMQ8 1374 aa12.78□□□□□ -0.36
TNFRSF11B-201ENST00000297350 LRRC7Q96NW7 1537 aa12.78□□□□□ -0.36
TNFRSF11B-201ENST00000297350 NEFMP07197 916 aa12.78□□□□□ -0.36
TNFRSF11B-201ENST00000297350 CPSF1Q10570 1443 aaKnown RBP12.78□□□□□ -0.36
TNFRSF11B-201ENST00000297350 ARHGAP23Q9P227 1491 aa12.78□□□□□ -0.36
TNFRSF11B-201ENST00000297350 ALDH1L2Q3SY69 923 aa12.78□□□□□ -0.36
TNFRSF11B-201ENST00000297350 FTSJ3Q8IY81 847 aaKnown RBP12.78□□□□□ -0.36
TNFRSF11B-201ENST00000297350 DZIP1LQ8IYY4 767 aaKnown RBP12.78□□□□□ -0.36
TNFRSF11B-201ENST00000297350 U2SURPO15042 1029 aaKnown RBP12.77□□□□□ -0.37
TNFRSF11B-201ENST00000297350 IPO8O15397 1037 aaKnown RBP12.77□□□□□ -0.37
TNFRSF11B-201ENST00000297350 SAFB2Q14151 953 aaKnown RBP eCLIP12.77□□□□□ -0.37
TNFRSF11B-201ENST00000297350 SKAP1Q86WV1 359 aa12.77□□□□□ -0.37
TNFRSF11B-201ENST00000297350 CHMP4BQ9H444 224 aaKnown RBP12.77□□□□□ -0.37
TNFRSF11B-201ENST00000297350 DDX19BQ9UMR2 479 aa12.77□□□□□ -0.37
TNFRSF11B-201ENST00000297350 TRIM35Q9UPQ4 493 aa12.77□□□□□ -0.37
TNFRSF11B-201ENST00000297350 DIP2AQ14689 1571 aa12.77□□□□□ -0.37
TNFRSF11B-201ENST00000297350 TMEM2Q9UHN6 1383 aa12.77□□□□□ -0.37
TNFRSF11B-201ENST00000297350 ITSN1Q15811 1721 aa12.77□□□□□ -0.37
TNFRSF11B-201ENST00000297350 BRPF1P55201 1214 aaPredicted RBP12.77□□□□□ -0.37
TNFRSF11B-201ENST00000297350 AKAP12Q02952 1782 aa12.77□□□□□ -0.37
TNFRSF11B-201ENST00000297350 ZNF142P52746 1687 aaPredicted RBP12.76□□□□□ -0.37
TNFRSF11B-201ENST00000297350 HDAC1Q13547 482 aaPredicted RBP12.76□□□□□ -0.37
TNFRSF11B-201ENST00000297350 UPF2Q9HAU5 1272 aaKnown RBP12.76□□□□□ -0.37
TNFRSF11B-201ENST00000297350 BECN1Q14457 450 aa12.76□□□□□ -0.37
TNFRSF11B-201ENST00000297350 RLBP1P12271 317 aa12.75□□□□□ -0.37
TNFRSF11B-201ENST00000297350 SMC4Q9NTJ3 1288 aa12.75□□□□□ -0.37
TNFRSF11B-201ENST00000297350 ADAMTSL3P82987 1691 aa12.75□□□□□ -0.37
TNFRSF11B-201ENST00000297350 CABP1Q9NZU7 370 aa12.74□□□□□ -0.37
TNFRSF11B-201ENST00000297350 MAP2P11137 1827 aaKnown RBP12.74□□□□□ -0.37
TNFRSF11B-201ENST00000297350 ATF7IPQ6VMQ6 1270 aa12.74□□□□□ -0.37
TNFRSF11B-201ENST00000297350 PCDHB15Q9Y5E8 787 aa12.74□□□□□ -0.37
TNFRSF11B-201ENST00000297350 PLEKHG1Q9ULL1 1385 aa12.74□□□□□ -0.37
TNFRSF11B-201ENST00000297350 RIPK4P57078 832 aa12.73□□□□□ -0.37
TNFRSF11B-201ENST00000297350 NRKQ7Z2Y5 1582 aa12.73□□□□□ -0.37
TNFRSF11B-201ENST00000297350 EXOSC9Q06265 439 aaKnown RBP12.73□□□□□ -0.37
TNFRSF11B-201ENST00000297350 LMOD3Q0VAK6 560 aa12.73□□□□□ -0.37
TNFRSF11B-201ENST00000297350 LAS1LQ9Y4W2 734 aaKnown RBP12.73□□□□□ -0.37
TNFRSF11B-201ENST00000297350 RIMS1Q86UR5 1692 aaKnown RBP12.73□□□□□ -0.37
TNFRSF11B-201ENST00000297350 ADAMTS13Q76LX8 1427 aa12.72□□□□□ -0.37
TNFRSF11B-201ENST00000297350 WASLO00401 505 aaPredicted RBP12.72□□□□□ -0.37
TNFRSF11B-201ENST00000297350 RSPH6AQ9H0K4 717 aa12.72□□□□□ -0.37
TNFRSF11B-201ENST00000297350 ARHGAP45Q92619 1136 aa12.71□□□□□ -0.37
TNFRSF11B-201ENST00000297350 PDZRN3Q9UPQ7 1066 aa12.71□□□□□ -0.37
TNFRSF11B-201ENST00000297350 CEP170BQ9Y4F5 1589 aaPredicted RBP12.71□□□□□ -0.37
TNFRSF11B-201ENST00000297350 USP19O94966 1318 aa12.71□□□□□ -0.37
TNFRSF11B-201ENST00000297350 TRIM27P14373 513 aa12.71□□□□□ -0.38
TNFRSF11B-201ENST00000297350 NFE2L2Q16236 605 aa12.71□□□□□ -0.38
TNFRSF11B-201ENST00000297350 SSH1Q8WYL5 1049 aa12.71□□□□□ -0.38
TNFRSF11B-201ENST00000297350 POLKQ9UBT6 870 aa12.71□□□□□ -0.38
TNFRSF11B-201ENST00000297350 TOPAZ1Q8N9V7 1692 aa12.7□□□□□ -0.38
TNFRSF11B-201ENST00000297350 TSR2Q969E8 191 aaKnown RBP12.7□□□□□ -0.38
TNFRSF11B-201ENST00000297350 ZNF692Q9BU19 519 aaPredicted RBP12.7□□□□□ -0.38
TNFRSF11B-201ENST00000297350 PIK3R4Q99570 1358 aa12.7□□□□□ -0.38
TNFRSF11B-201ENST00000297350 BCL2L13Q9BXK5 485 aa12.7□□□□□ -0.38
TNFRSF11B-201ENST00000297350 TRHP20396 242 aaPredicted RBP12.69□□□□□ -0.38
TNFRSF11B-201ENST00000297350 GNAI1P63096 354 aa12.69□□□□□ -0.38
TNFRSF11B-201ENST00000297350 PTCH1Q13635 1447 aa12.69□□□□□ -0.38
TNFRSF11B-201ENST00000297350 IFT57Q9NWB7 429 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms