RNA–Protein interactions for RNA: ENST00000296786.7

UBLCP1-201, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBLCP1, Length 2,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-201ENST00000296786 RGS3P49796 1198 aa12.01□□□□□ -0.49
UBLCP1-201ENST00000296786 CLUAP1Q96AJ1 413 aa12.01□□□□□ -0.49
UBLCP1-201ENST00000296786 CABP1Q9NZU7 370 aa12.01□□□□□ -0.49
UBLCP1-201ENST00000296786 IGHDP01880 384 aa12.01□□□□□ -0.49
UBLCP1-201ENST00000296786 PLEKHF1Q96S99 279 aa12.01□□□□□ -0.49
UBLCP1-201ENST00000296786 MYH16Q9H6N6 1097 aa12.01□□□□□ -0.49
UBLCP1-201ENST00000296786 FAM161AQ3B820 660 aa12□□□□□ -0.49
UBLCP1-201ENST00000296786 C8orf34Q49A92 452 aa12□□□□□ -0.49
UBLCP1-201ENST00000296786 WAPLQ7Z5K2 1190 aa12□□□□□ -0.49
UBLCP1-201ENST00000296786 BCL2L13Q9BXK5 485 aa12□□□□□ -0.49
UBLCP1-201ENST00000296786 KNDC1Q76NI1 1749 aa12□□□□□ -0.49
UBLCP1-201ENST00000296786 ATP7BP35670 1465 aa12□□□□□ -0.49
UBLCP1-201ENST00000296786 CDC42BPGQ6DT37 1551 aa11.99□□□□□ -0.49
UBLCP1-201ENST00000296786 TMPOP42166 694 aaKnown RBP11.99□□□□□ -0.49
UBLCP1-201ENST00000296786 TNNQ9UQP3 1299 aa11.99□□□□□ -0.49
UBLCP1-201ENST00000296786 MAPK8IP3Q9UPT6 1336 aa11.98□□□□□ -0.49
UBLCP1-201ENST00000296786 LRRC7Q96NW7 1537 aa11.98□□□□□ -0.49
UBLCP1-201ENST00000296786 ITSN1Q15811 1721 aa11.98□□□□□ -0.49
UBLCP1-201ENST00000296786 RLBP1P12271 317 aa11.98□□□□□ -0.49
UBLCP1-201ENST00000296786 PNPLA6Q8IY17 1366 aa11.98□□□□□ -0.49
UBLCP1-201ENST00000296786 MON2Q7Z3U7 1717 aa11.98□□□□□ -0.49
UBLCP1-201ENST00000296786 TSR2Q969E8 191 aaKnown RBP11.98□□□□□ -0.49
UBLCP1-201ENST00000296786 AKAP12Q02952 1782 aa11.97□□□□□ -0.49
UBLCP1-201ENST00000296786 DIAPH1O60610 1272 aaKnown RBP11.97□□□□□ -0.49
UBLCP1-201ENST00000296786 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.97□□□□□ -0.49
UBLCP1-201ENST00000296786 TRIM35Q9UPQ4 493 aa11.97□□□□□ -0.49
UBLCP1-201ENST00000296786 UBR1Q8IWV7 1749 aa11.97□□□□□ -0.49
UBLCP1-201ENST00000296786 DLG5Q8TDM6 1919 aa11.97□□□□□ -0.49
UBLCP1-201ENST00000296786 DDRGK1Q96HY6 314 aa11.96□□□□□ -0.49
UBLCP1-201ENST00000296786 METP08581 1390 aa11.96□□□□□ -0.5
UBLCP1-201ENST00000296786 ZMYM3Q14202 1370 aa11.96□□□□□ -0.5
UBLCP1-201ENST00000296786 AAMPQ13685 434 aa11.96□□□□□ -0.5
UBLCP1-201ENST00000296786 PPIP5K1Q6PFW1 1433 aa11.95□□□□□ -0.5
UBLCP1-201ENST00000296786 CT47B1P0C2W7 299 aaPredicted RBP11.95□□□□□ -0.5
UBLCP1-201ENST00000296786 FBLN1P23142 703 aa11.94□□□□□ -0.5
UBLCP1-201ENST00000296786 RIPK4P57078 832 aa11.94□□□□□ -0.5
UBLCP1-201ENST00000296786 EXOSC9Q06265 439 aaKnown RBP11.94□□□□□ -0.5
UBLCP1-201ENST00000296786 ESF1Q9H501 851 aaKnown RBP11.94□□□□□ -0.5
UBLCP1-201ENST00000296786 CPSF1Q10570 1443 aaKnown RBP11.94□□□□□ -0.5
UBLCP1-201ENST00000296786 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.94□□□□□ -0.5
UBLCP1-201ENST00000296786 PMFBP1Q8TBY8 1022 aa11.94□□□□□ -0.5
UBLCP1-201ENST00000296786 PCDHB15Q9Y5E8 787 aa11.94□□□□□ -0.5
UBLCP1-201ENST00000296786 CPS1P31327 1500 aa11.94□□□□□ -0.5
UBLCP1-201ENST00000296786 C3P01024 1663 aa11.94□□□□□ -0.5
UBLCP1-201ENST00000296786 EDC4Q6P2E9 1401 aaKnown RBP11.94□□□□□ -0.5
UBLCP1-201ENST00000296786 WASLO00401 505 aaPredicted RBP11.93□□□□□ -0.5
UBLCP1-201ENST00000296786 PPM1GO15355 546 aaPredicted RBP11.93□□□□□ -0.5
UBLCP1-201ENST00000296786 PNNQ9H307 717 aaKnown RBP11.93□□□□□ -0.5
UBLCP1-201ENST00000296786 POLKQ9UBT6 870 aa11.93□□□□□ -0.5
UBLCP1-201ENST00000296786 IL16Q14005 1332 aa11.93□□□□□ -0.5
UBLCP1-201ENST00000296786 ZKSCAN2Q63HK3 967 aa11.93□□□□□ -0.5
UBLCP1-201ENST00000296786 TXNDC2Q86VQ3 553 aa11.93□□□□□ -0.5
UBLCP1-201ENST00000296786 FAM135BQ49AJ0 1406 aa11.93□□□□□ -0.5
UBLCP1-201ENST00000296786 MVPQ14764 893 aaKnown RBP11.92□□□□□ -0.5
UBLCP1-201ENST00000296786 SMC4Q9NTJ3 1288 aa11.92□□□□□ -0.5
UBLCP1-201ENST00000296786 LAS1LQ9Y4W2 734 aaKnown RBP11.92□□□□□ -0.5
UBLCP1-201ENST00000296786 FCHSD2O94868 740 aa11.92□□□□□ -0.5
UBLCP1-201ENST00000296786 RTL5Q5HYW3 569 aaPredicted RBP11.92□□□□□ -0.5
UBLCP1-201ENST00000296786 FTSJ3Q8IY81 847 aaKnown RBP11.92□□□□□ -0.5
UBLCP1-201ENST00000296786 TECPR2O15040 1411 aa11.92□□□□□ -0.5
UBLCP1-201ENST00000296786 DZIP1LQ8IYY4 767 aaKnown RBP11.91□□□□□ -0.5
UBLCP1-201ENST00000296786 RSPH6AQ9H0K4 717 aa11.91□□□□□ -0.5
UBLCP1-201ENST00000296786 TNRQ92752 1358 aa11.91□□□□□ -0.5
UBLCP1-201ENST00000296786 PRKAR2BP31323 418 aa11.91□□□□□ -0.5
UBLCP1-201ENST00000296786 DEKP35659 375 aaKnown RBP11.91□□□□□ -0.5
UBLCP1-201ENST00000296786 SSH1Q8WYL5 1049 aa11.91□□□□□ -0.5
UBLCP1-201ENST00000296786 CDK12Q9NYV4 1490 aaPredicted RBP11.9□□□□□ -0.5
UBLCP1-201ENST00000296786 NCKAP5LQ9HCH0 1330 aa11.9□□□□□ -0.5
UBLCP1-201ENST00000296786 TRIM27P14373 513 aa11.9□□□□□ -0.51
UBLCP1-201ENST00000296786 NME9Q86XW9 330 aa11.9□□□□□ -0.51
UBLCP1-201ENST00000296786 NUDT16Q96DE0 195 aaKnown RBP11.9□□□□□ -0.51
UBLCP1-201ENST00000296786 EMILIN1Q9Y6C2 1016 aa11.9□□□□□ -0.51
UBLCP1-201ENST00000296786 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.89□□□□□ -0.51
UBLCP1-201ENST00000296786 TOPAZ1Q8N9V7 1692 aa11.89□□□□□ -0.51
UBLCP1-201ENST00000296786 HMOX1P09601 288 aa11.89□□□□□ -0.51
UBLCP1-201ENST00000296786 HDGFP51858 240 aaKnown RBP11.89□□□□□ -0.51
UBLCP1-201ENST00000296786 RWDD1Q9H446 243 aaPredicted RBP11.89□□□□□ -0.51
UBLCP1-201ENST00000296786 ZRANB1Q9UGI0 708 aa11.89□□□□□ -0.51
UBLCP1-201ENST00000296786 TMEM2Q9UHN6 1383 aa11.88□□□□□ -0.51
UBLCP1-201ENST00000296786 NRKQ7Z2Y5 1582 aa11.88□□□□□ -0.51
UBLCP1-201ENST00000296786 NEFMP07197 916 aa11.88□□□□□ -0.51
UBLCP1-201ENST00000296786 SLC4A3P48751 1232 aa11.88□□□□□ -0.51
UBLCP1-201ENST00000296786 ATF7IPQ6VMQ6 1270 aa11.87□□□□□ -0.51
UBLCP1-201ENST00000296786 SIRT1Q96EB6 747 aa11.87□□□□□ -0.51
UBLCP1-201ENST00000296786 PDZRN3Q9UPQ7 1066 aa11.87□□□□□ -0.51
UBLCP1-201ENST00000296786 CCDC61Q9Y6R9 512 aa11.87□□□□□ -0.51
UBLCP1-201ENST00000296786 AATKQ6ZMQ8 1374 aa11.87□□□□□ -0.51
UBLCP1-201ENST00000296786 PHACTR3Q96KR7 559 aa11.87□□□□□ -0.51
UBLCP1-201ENST00000296786 DAXXQ9UER7 740 aaPredicted RBP11.87□□□□□ -0.51
UBLCP1-201ENST00000296786 NOB1Q9ULX3 412 aaKnown RBP11.87□□□□□ -0.51
UBLCP1-201ENST00000296786 ITPRIPQ8IWB1 547 aa11.86□□□□□ -0.51
UBLCP1-201ENST00000296786 ADAMTS13Q76LX8 1427 aa11.86□□□□□ -0.51
UBLCP1-201ENST00000296786 IL13P35225 146 aa11.86□□□□□ -0.51
UBLCP1-201ENST00000296786 NFE2L2Q16236 605 aa11.86□□□□□ -0.51
UBLCP1-201ENST00000296786 COG3Q96JB2 828 aa11.86□□□□□ -0.51
UBLCP1-201ENST00000296786 DDX19BQ9UMR2 479 aa11.86□□□□□ -0.51
UBLCP1-201ENST00000296786 ROBO2Q9HCK4 1378 aa11.86□□□□□ -0.51
UBLCP1-201ENST00000296786 USP19O94966 1318 aa11.86□□□□□ -0.51
UBLCP1-201ENST00000296786 KIF16BQ96L93 1317 aa11.86□□□□□ -0.51
UBLCP1-201ENST00000296786 PRR36Q9H6K5 1346 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms