RNA–Protein interactions for RNA: ENST00000293845.7

CCDC42-201, Transcript of coiled-coil domain containing 42, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC42, Length 1,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-201ENST00000293845 TERF2IPQ9NYB0 399 aa18.37■□□□□ 0.53
CCDC42-201ENST00000293845 TNS3Q68CZ2 1445 aa18.37■□□□□ 0.53
CCDC42-201ENST00000293845 HDGFL2Q7Z4V5 671 aaPredicted RBP18.36■□□□□ 0.53
CCDC42-201ENST00000293845 ILDR1Q86SU0 546 aaPredicted RBP18.36■□□□□ 0.53
CCDC42-201ENST00000293845 KTN1Q86UP2 1357 aaKnown RBP18.36■□□□□ 0.53
CCDC42-201ENST00000293845 SPATA31A3Q5VYP0 1347 aa18.35■□□□□ 0.53
CCDC42-201ENST00000293845 POLR3GLQ9BT43 218 aa18.35■□□□□ 0.53
CCDC42-201ENST00000293845 EDC4Q6P2E9 1401 aaKnown RBP18.34■□□□□ 0.53
CCDC42-201ENST00000293845 JCADQ9P266 1359 aa18.34■□□□□ 0.53
CCDC42-201ENST00000293845 PNPLA6Q8IY17 1366 aa18.33■□□□□ 0.53
CCDC42-201ENST00000293845 PIK3C2AO00443 1686 aa18.33■□□□□ 0.52
CCDC42-201ENST00000293845 USP54Q70EL1 1684 aa18.33■□□□□ 0.52
CCDC42-201ENST00000293845 CRYBG1Q9Y4K1 1723 aa18.33■□□□□ 0.52
CCDC42-201ENST00000293845 MED1Q15648 1581 aaPredicted RBP18.32■□□□□ 0.52
CCDC42-201ENST00000293845 ARHGEF10O15013 1369 aa18.32■□□□□ 0.52
CCDC42-201ENST00000293845 ABCA3Q99758 1704 aa18.31■□□□□ 0.52
CCDC42-201ENST00000293845 TTC21BQ7Z4L5 1316 aa18.31■□□□□ 0.52
CCDC42-201ENST00000293845 TTC21AQ8NDW8 1320 aa18.31■□□□□ 0.52
CCDC42-201ENST00000293845 MARF1Q9Y4F3 1742 aaKnown RBP18.31■□□□□ 0.52
CCDC42-201ENST00000293845 KIF20BQ96Q89 1820 aa18.3■□□□□ 0.52
CCDC42-201ENST00000293845 PAK3O75914 559 aaPredicted RBP18.29■□□□□ 0.52
CCDC42-201ENST00000293845 PHRF1Q9P1Y6 1649 aaKnown RBP18.28■□□□□ 0.52
CCDC42-201ENST00000293845 NSD3Q9BZ95 1437 aa18.27■□□□□ 0.52
CCDC42-201ENST00000293845 CARD14Q9BXL6 1004 aa18.27■□□□□ 0.51
CCDC42-201ENST00000293845 PANK3Q9H999 370 aa18.27■□□□□ 0.51
CCDC42-201ENST00000293845 SPATA31A6Q5VVP1 1343 aa18.27■□□□□ 0.51
CCDC42-201ENST00000293845 ABTB2Q8N961 1025 aa18.26■□□□□ 0.51
CCDC42-201ENST00000293845 USP31Q70CQ4 1352 aa18.25■□□□□ 0.51
CCDC42-201ENST00000293845 ANKRD26Q9UPS8 1709 aa18.25■□□□□ 0.51
CCDC42-201ENST00000293845 SLIT3O75094 1523 aa18.24■□□□□ 0.51
CCDC42-201ENST00000293845 LMOD2Q6P5Q4 547 aa18.24■□□□□ 0.51
CCDC42-201ENST00000293845 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.24■□□□□ 0.51
CCDC42-201ENST00000293845 USP19O94966 1318 aa18.24■□□□□ 0.51
CCDC42-201ENST00000293845 ZNF316A6NFI3 1004 aaPredicted RBP18.23■□□□□ 0.51
CCDC42-201ENST00000293845 OVOS2A0A0J9YW53 1432 aa18.23■□□□□ 0.51
CCDC42-201ENST00000293845 OVOS2Q6IE36 1432 aa18.23■□□□□ 0.51
CCDC42-201ENST00000293845 NLRP13Q86W25 1043 aa18.22■□□□□ 0.51
CCDC42-201ENST00000293845 NME9Q86XW9 330 aa18.22■□□□□ 0.51
CCDC42-201ENST00000293845 LRP6O75581 1613 aa18.22■□□□□ 0.51
CCDC42-201ENST00000293845 CGNL1Q0VF96 1302 aa18.2■□□□□ 0.5
CCDC42-201ENST00000293845 PER1O15534 1290 aaPredicted RBP18.2■□□□□ 0.5
CCDC42-201ENST00000293845 NLRP6P59044 892 aa18.2■□□□□ 0.5
CCDC42-201ENST00000293845 FYB1O15117 783 aa18.19■□□□□ 0.5
CCDC42-201ENST00000293845 NUTM2GQ5VZR2 741 aa18.19■□□□□ 0.5
CCDC42-201ENST00000293845 NSD2O96028 1365 aa18.19■□□□□ 0.5
CCDC42-201ENST00000293845 CABLES1Q8TDN4 633 aa18.17■□□□□ 0.5
CCDC42-201ENST00000293845 ZRANB1Q9UGI0 708 aa18.17■□□□□ 0.5
CCDC42-201ENST00000293845 KNSTRNQ9Y448 316 aa18.17■□□□□ 0.5
CCDC42-201ENST00000293845 NFAT5O94916 1531 aa18.17■□□□□ 0.5
CCDC42-201ENST00000293845 NPC1L1Q9UHC9 1359 aa18.16■□□□□ 0.5
CCDC42-201ENST00000293845 AMER1Q5JTC6 1135 aaPredicted RBP18.16■□□□□ 0.5
CCDC42-201ENST00000293845 COG3Q96JB2 828 aa18.16■□□□□ 0.5
CCDC42-201ENST00000293845 GGNBP2Q9H3C7 697 aa18.16■□□□□ 0.5
CCDC42-201ENST00000293845 KCNH5Q8NCM2 988 aa18.15■□□□□ 0.5
CCDC42-201ENST00000293845 LTN1O94822 1766 aa18.14■□□□□ 0.5
CCDC42-201ENST00000293845 NUTM2BA6NNL0 878 aaPredicted RBP18.14■□□□□ 0.49
CCDC42-201ENST00000293845 NUTM2EB1AL46 878 aaPredicted RBP18.14■□□□□ 0.49
CCDC42-201ENST00000293845 GCP02774 474 aa18.14■□□□□ 0.49
CCDC42-201ENST00000293845 HAP1P54257 671 aaPredicted RBP18.14■□□□□ 0.49
CCDC42-201ENST00000293845 NUTM2AQ8IVF1 878 aaPredicted RBP18.14■□□□□ 0.49
CCDC42-201ENST00000293845 CPDO75976 1380 aa18.13■□□□□ 0.49
CCDC42-201ENST00000293845 COL14A1Q05707 1796 aaKnown RBP18.13■□□□□ 0.49
CCDC42-201ENST00000293845 DDX10Q13206 875 aaKnown RBP18.13■□□□□ 0.49
CCDC42-201ENST00000293845 PLCH1Q4KWH8 1693 aa18.13■□□□□ 0.49
CCDC42-201ENST00000293845 PLEKHG5O94827 1062 aa18.12■□□□□ 0.49
CCDC42-201ENST00000293845 NWD2Q9ULI1 1742 aa18.11■□□□□ 0.49
CCDC42-201ENST00000293845 COL18A1P39060 1754 aa18.11■□□□□ 0.49
CCDC42-201ENST00000293845 ABCC6O95255 1503 aa18.11■□□□□ 0.49
CCDC42-201ENST00000293845 MAP2P11137 1827 aaKnown RBP18.11■□□□□ 0.49
CCDC42-201ENST00000293845 LMO7Q8WWI1 1683 aa18.1■□□□□ 0.49
CCDC42-201ENST00000293845 ADAMTS2O95450 1211 aa18.1■□□□□ 0.49
CCDC42-201ENST00000293845 KIAA0232Q92628 1395 aa18.1■□□□□ 0.49
CCDC42-201ENST00000293845 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.09■□□□□ 0.49
CCDC42-201ENST00000293845 NRAPQ86VF7 1730 aa18.08■□□□□ 0.48
CCDC42-201ENST00000293845 SLIT2O94813 1529 aa18.08■□□□□ 0.48
CCDC42-201ENST00000293845 AATKQ6ZMQ8 1374 aa18.07■□□□□ 0.48
CCDC42-201ENST00000293845 ZC3H6P61129 1189 aaKnown RBP18.07■□□□□ 0.48
CCDC42-201ENST00000293845 MEX3CQ5U5Q3 659 aaKnown RBP18.07■□□□□ 0.48
CCDC42-201ENST00000293845 ARHGEF25Q86VW2 580 aa18.07■□□□□ 0.48
CCDC42-201ENST00000293845 RGPD5Q99666 1765 aa18.07■□□□□ 0.48
CCDC42-201ENST00000293845 PRDM11Q9NQV5 511 aa18.06■□□□□ 0.48
CCDC42-201ENST00000293845 FAM83GA6ND36 823 aa18.05■□□□□ 0.48
CCDC42-201ENST00000293845 SOX12O15370 315 aa18.05■□□□□ 0.48
CCDC42-201ENST00000293845 C8orf37Q96NL8 207 aa18.05■□□□□ 0.48
CCDC42-201ENST00000293845 PEAK1Q9H792 1746 aa18.05■□□□□ 0.48
CCDC42-201ENST00000293845 CC2D1BQ5T0F9 858 aaKnown RBP18.04■□□□□ 0.48
CCDC42-201ENST00000293845 MORC1Q86VD1 984 aa18.04■□□□□ 0.48
CCDC42-201ENST00000293845 FNBP4Q8N3X1 1017 aaPredicted RBP18.04■□□□□ 0.48
CCDC42-201ENST00000293845 NGLY1Q96IV0 654 aa18.04■□□□□ 0.48
CCDC42-201ENST00000293845 CAMTA1Q9Y6Y1 1673 aa18.03■□□□□ 0.48
CCDC42-201ENST00000293845 MAP3K19Q56UN5 1328 aa18.03■□□□□ 0.48
CCDC42-201ENST00000293845 RTL1A6NKG5 1358 aa18.03■□□□□ 0.48
CCDC42-201ENST00000293845 KIF24Q5T7B8 1368 aa18.03■□□□□ 0.48
CCDC42-201ENST00000293845 SMG6Q86US8 1419 aaKnown RBP18.03■□□□□ 0.48
CCDC42-201ENST00000293845 BCL9LQ86UU0 1499 aa18.02■□□□□ 0.48
CCDC42-201ENST00000293845 FBLN1P23142 703 aa18.02■□□□□ 0.47
CCDC42-201ENST00000293845 CHRNA2Q15822 529 aa18.02■□□□□ 0.47
CCDC42-201ENST00000293845 AFF2P51816 1311 aa18.02■□□□□ 0.47
CCDC42-201ENST00000293845 PARD3Q8TEW0 1356 aa18.01■□□□□ 0.47
CCDC42-201ENST00000293845 BLMP54132 1417 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms