RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.87■■□□□ 1.73
CXCL16-201ENST00000293778 PNPLA6Q8IY17 1366 aa25.87■■□□□ 1.73
CXCL16-201ENST00000293778 DIAPH1O60610 1272 aaKnown RBP25.86■■□□□ 1.73
CXCL16-201ENST00000293778 MAPK8IP3Q9UPT6 1336 aa25.86■■□□□ 1.73
CXCL16-201ENST00000293778 TXNDC2Q86VQ3 553 aa25.86■■□□□ 1.73
CXCL16-201ENST00000293778 KNDC1Q76NI1 1749 aa25.85■■□□□ 1.73
CXCL16-201ENST00000293778 FAM135BQ49AJ0 1406 aa25.84■■□□□ 1.73
CXCL16-201ENST00000293778 TMPOP42166 694 aaKnown RBP25.84■■□□□ 1.73
CXCL16-201ENST00000293778 FRAT1Q92837 279 aaPredicted RBP25.84■■□□□ 1.73
CXCL16-201ENST00000293778 TECPR2O15040 1411 aa25.84■■□□□ 1.73
CXCL16-201ENST00000293778 PPIP5K1Q6PFW1 1433 aa25.84■■□□□ 1.73
CXCL16-201ENST00000293778 SIRT1Q96EB6 747 aa25.83■■□□□ 1.73
CXCL16-201ENST00000293778 TMEM2Q9UHN6 1383 aa25.83■■□□□ 1.73
CXCL16-201ENST00000293778 UBR1Q8IWV7 1749 aa25.83■■□□□ 1.73
CXCL16-201ENST00000293778 PANK1Q8TE04 598 aa25.83■■□□□ 1.72
CXCL16-201ENST00000293778 CPSF1Q10570 1443 aaKnown RBP25.82■■□□□ 1.72
CXCL16-201ENST00000293778 COG6Q9Y2V7 657 aa25.81■■□□□ 1.72
CXCL16-201ENST00000293778 CPS1P31327 1500 aa25.81■■□□□ 1.72
CXCL16-201ENST00000293778 EDC4Q6P2E9 1401 aaKnown RBP25.8■■□□□ 1.72
CXCL16-201ENST00000293778 PNNQ9H307 717 aaKnown RBP25.8■■□□□ 1.72
CXCL16-201ENST00000293778 NPM2Q86SE8 214 aaKnown RBP25.79■■□□□ 1.72
CXCL16-201ENST00000293778 TRIM35Q9UPQ4 493 aa25.79■■□□□ 1.72
CXCL16-201ENST00000293778 CDC42BPGQ6DT37 1551 aa25.78■■□□□ 1.72
CXCL16-201ENST00000293778 PAK3O75914 559 aaPredicted RBP25.78■■□□□ 1.72
CXCL16-201ENST00000293778 CLUAP1Q96AJ1 413 aa25.78■■□□□ 1.72
CXCL16-201ENST00000293778 NUDT16Q96DE0 195 aaKnown RBP25.78■■□□□ 1.72
CXCL16-201ENST00000293778 POLKQ9UBT6 870 aa25.78■■□□□ 1.72
CXCL16-201ENST00000293778 BCL2L13Q9BXK5 485 aa25.76■■□□□ 1.71
CXCL16-201ENST00000293778 CT47B1P0C2W7 299 aaPredicted RBP25.76■■□□□ 1.71
CXCL16-201ENST00000293778 ZBTB47Q9UFB7 747 aaPredicted RBP25.76■■□□□ 1.71
CXCL16-201ENST00000293778 PPM1GO15355 546 aaPredicted RBP25.75■■□□□ 1.71
CXCL16-201ENST00000293778 TSR2Q969E8 191 aaKnown RBP25.75■■□□□ 1.71
CXCL16-201ENST00000293778 FCHSD2O94868 740 aa25.75■■□□□ 1.71
CXCL16-201ENST00000293778 CCDC61Q9Y6R9 512 aa25.75■■□□□ 1.71
CXCL16-201ENST00000293778 IL16Q14005 1332 aa25.75■■□□□ 1.71
CXCL16-201ENST00000293778 FBLN1P23142 703 aa25.74■■□□□ 1.71
CXCL16-201ENST00000293778 RIPK4P57078 832 aa25.74■■□□□ 1.71
CXCL16-201ENST00000293778 IGHDP01880 384 aa25.73■■□□□ 1.71
CXCL16-201ENST00000293778 AAMPQ13685 434 aa25.73■■□□□ 1.71
CXCL16-201ENST00000293778 NME9Q86XW9 330 aa25.73■■□□□ 1.71
CXCL16-201ENST00000293778 ADAMTS13Q76LX8 1427 aa25.73■■□□□ 1.71
CXCL16-201ENST00000293778 LRRC7Q96NW7 1537 aa25.73■■□□□ 1.71
CXCL16-201ENST00000293778 MAP2P11137 1827 aaKnown RBP25.71■■□□□ 1.71
CXCL16-201ENST00000293778 MON2Q7Z3U7 1717 aa25.71■■□□□ 1.71
CXCL16-201ENST00000293778 NCKAP5LQ9HCH0 1330 aa25.71■■□□□ 1.71
CXCL16-201ENST00000293778 ROBO2Q9HCK4 1378 aa25.71■■□□□ 1.71
CXCL16-201ENST00000293778 RLBP1P12271 317 aa25.71■■□□□ 1.71
CXCL16-201ENST00000293778 EXOSC9Q06265 439 aaKnown RBP25.71■■□□□ 1.71
CXCL16-201ENST00000293778 TNNQ9UQP3 1299 aa25.71■■□□□ 1.71
CXCL16-201ENST00000293778 PLEKHG1Q9ULL1 1385 aa25.7■■□□□ 1.7
CXCL16-201ENST00000293778 RGS3P49796 1198 aa25.69■■□□□ 1.7
CXCL16-201ENST00000293778 RSPH6AQ9H0K4 717 aa25.69■■□□□ 1.7
CXCL16-201ENST00000293778 PRKAR2BP31323 418 aa25.68■■□□□ 1.7
CXCL16-201ENST00000293778 FAM161AQ3B820 660 aa25.68■■□□□ 1.7
CXCL16-201ENST00000293778 EMILIN1Q9Y6C2 1016 aa25.68■■□□□ 1.7
CXCL16-201ENST00000293778 AATKQ6ZMQ8 1374 aa25.68■■□□□ 1.7
CXCL16-201ENST00000293778 NEFMP07197 916 aa25.68■■□□□ 1.7
CXCL16-201ENST00000293778 ZRANB1Q9UGI0 708 aa25.68■■□□□ 1.7
CXCL16-201ENST00000293778 AKAP12Q02952 1782 aa25.68■■□□□ 1.7
CXCL16-201ENST00000293778 ITSN1Q15811 1721 aa25.68■■□□□ 1.7
CXCL16-201ENST00000293778 PRR36Q9H6K5 1346 aa25.67■■□□□ 1.7
CXCL16-201ENST00000293778 CDK12Q9NYV4 1490 aaPredicted RBP25.67■■□□□ 1.7
CXCL16-201ENST00000293778 LTKP29376 864 aa25.67■■□□□ 1.7
CXCL16-201ENST00000293778 ZKSCAN2Q63HK3 967 aa25.67■■□□□ 1.7
CXCL16-201ENST00000293778 COG3Q96JB2 828 aa25.67■■□□□ 1.7
CXCL16-201ENST00000293778 CEBPAP49715 358 aaPredicted RBP25.66■■□□□ 1.7
CXCL16-201ENST00000293778 ZNF692Q9BU19 519 aaPredicted RBP25.66■■□□□ 1.7
CXCL16-201ENST00000293778 SMC4Q9NTJ3 1288 aa25.65■■□□□ 1.7
CXCL16-201ENST00000293778 C3P01024 1663 aa25.65■■□□□ 1.7
CXCL16-201ENST00000293778 C8orf34Q49A92 452 aa25.64■■□□□ 1.69
CXCL16-201ENST00000293778 PMFBP1Q8TBY8 1022 aa25.64■■□□□ 1.69
CXCL16-201ENST00000293778 IL13P35225 146 aa25.63■■□□□ 1.69
CXCL16-201ENST00000293778 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.62■■□□□ 1.69
CXCL16-201ENST00000293778 HMOX1P09601 288 aa25.62■■□□□ 1.69
CXCL16-201ENST00000293778 MVPQ14764 893 aaKnown RBP25.62■■□□□ 1.69
CXCL16-201ENST00000293778 FTSJ3Q8IY81 847 aaKnown RBP25.61■■□□□ 1.69
CXCL16-201ENST00000293778 DZIP1LQ8IYY4 767 aaKnown RBP25.61■■□□□ 1.69
CXCL16-201ENST00000293778 SSH1Q8WYL5 1049 aa25.61■■□□□ 1.69
CXCL16-201ENST00000293778 PCDHB15Q9Y5E8 787 aa25.61■■□□□ 1.69
CXCL16-201ENST00000293778 EID1Q9Y6B2 187 aa25.61■■□□□ 1.69
CXCL16-201ENST00000293778 NFE2L2Q16236 605 aa25.6■■□□□ 1.69
CXCL16-201ENST00000293778 PHACTR3Q96KR7 559 aa25.59■■□□□ 1.69
CXCL16-201ENST00000293778 RRS1Q15050 365 aaKnown RBP25.58■■□□□ 1.69
CXCL16-201ENST00000293778 SLC26A8Q96RN1 970 aa25.58■■□□□ 1.69
CXCL16-201ENST00000293778 TOPAZ1Q8N9V7 1692 aa25.58■■□□□ 1.69
CXCL16-201ENST00000293778 PTPRUQ92729 1446 aa25.57■■□□□ 1.68
CXCL16-201ENST00000293778 DDRGK1Q96HY6 314 aa25.57■■□□□ 1.68
CXCL16-201ENST00000293778 SLIT1O75093 1534 aa25.56■■□□□ 1.68
CXCL16-201ENST00000293778 TRIM27P14373 513 aa25.56■■□□□ 1.68
CXCL16-201ENST00000293778 ARHGAP23Q9P227 1491 aa25.55■■□□□ 1.68
CXCL16-201ENST00000293778 NRKQ7Z2Y5 1582 aa25.55■■□□□ 1.68
CXCL16-201ENST00000293778 ACEP12821 1306 aa25.55■■□□□ 1.68
CXCL16-201ENST00000293778 TTC21BQ7Z4L5 1316 aa25.55■■□□□ 1.68
CXCL16-201ENST00000293778 PLEKHG3A1L390 1219 aa25.55■■□□□ 1.68
CXCL16-201ENST00000293778 ATF7IPQ6VMQ6 1270 aa25.55■■□□□ 1.68
CXCL16-201ENST00000293778 BCL11AQ9H165 835 aa25.55■■□□□ 1.68
CXCL16-201ENST00000293778 RWDD1Q9H446 243 aaPredicted RBP25.55■■□□□ 1.68
CXCL16-201ENST00000293778 CALD1Q05682 793 aaKnown RBP25.54■■□□□ 1.68
CXCL16-201ENST00000293778 NOB1Q9ULX3 412 aaKnown RBP25.53■■□□□ 1.68
CXCL16-201ENST00000293778 PLPPR3Q6T4P5 718 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms