RNA–Protein interactions for RNA: ENST00000290178.4

PAXBP1-201, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PAXBP1, Length 2,564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-201ENST00000290178 TSPOAP1O95153 1857 aa27.85■■■□□ 2.05
PAXBP1-201ENST00000290178 SEC24BO95487 1268 aa27.84■■■□□ 2.05
PAXBP1-201ENST00000290178 PPM1GO15355 546 aaPredicted RBP27.83■■■□□ 2.05
PAXBP1-201ENST00000290178 NCBP3Q53F19 620 aaKnown RBP27.83■■■□□ 2.05
PAXBP1-201ENST00000290178 ARHGEF40Q8TER5 1519 aa27.83■■■□□ 2.05
PAXBP1-201ENST00000290178 DIAPH1O60610 1272 aaKnown RBP27.83■■■□□ 2.05
PAXBP1-201ENST00000290178 RIPK4P57078 832 aa27.82■■■□□ 2.04
PAXBP1-201ENST00000290178 PMFBP1Q8TBY8 1022 aa27.82■■■□□ 2.04
PAXBP1-201ENST00000290178 DAXXQ9UER7 740 aaPredicted RBP27.82■■■□□ 2.04
PAXBP1-201ENST00000290178 CLTCQ00610 1675 aaKnown RBP27.81■■■□□ 2.04
PAXBP1-201ENST00000290178 ZKSCAN2Q63HK3 967 aa27.8■■■□□ 2.04
PAXBP1-201ENST00000290178 SMC4Q9NTJ3 1288 aa27.8■■■□□ 2.04
PAXBP1-201ENST00000290178 MVPQ14764 893 aaKnown RBP27.79■■■□□ 2.04
PAXBP1-201ENST00000290178 FTSJ3Q8IY81 847 aaKnown RBP27.78■■■□□ 2.04
PAXBP1-201ENST00000290178 SSH1Q8WYL5 1049 aa27.78■■■□□ 2.04
PAXBP1-201ENST00000290178 USP19O94966 1318 aa27.78■■■□□ 2.04
PAXBP1-201ENST00000290178 DZIP1LQ8IYY4 767 aaKnown RBP27.78■■■□□ 2.04
PAXBP1-201ENST00000290178 PDZRN3Q9UPQ7 1066 aa27.78■■■□□ 2.04
PAXBP1-201ENST00000290178 A2ML1A8K2U0 1454 aa27.77■■■□□ 2.04
PAXBP1-201ENST00000290178 MED14O60244 1454 aa27.77■■■□□ 2.04
PAXBP1-201ENST00000290178 ANKRD26Q9UPS8 1709 aa27.76■■■□□ 2.03
PAXBP1-201ENST00000290178 DIP2BQ9P265 1576 aa27.75■■■□□ 2.03
PAXBP1-201ENST00000290178 RIMS2Q9UQ26 1411 aa27.75■■■□□ 2.03
PAXBP1-201ENST00000290178 TRIM27P14373 513 aa27.75■■■□□ 2.03
PAXBP1-201ENST00000290178 PNPLA6Q8IY17 1366 aa27.75■■■□□ 2.03
PAXBP1-201ENST00000290178 POLKQ9UBT6 870 aa27.74■■■□□ 2.03
PAXBP1-201ENST00000290178 AAMPQ13685 434 aa27.74■■■□□ 2.03
PAXBP1-201ENST00000290178 RWDD1Q9H446 243 aaPredicted RBP27.73■■■□□ 2.03
PAXBP1-201ENST00000290178 USP35Q9P2H5 1018 aa27.73■■■□□ 2.03
PAXBP1-201ENST00000290178 NOB1Q9ULX3 412 aaKnown RBP27.72■■■□□ 2.03
PAXBP1-201ENST00000290178 CT47B1P0C2W7 299 aaPredicted RBP27.71■■■□□ 2.03
PAXBP1-201ENST00000290178 PRKAR2BP31323 418 aa27.71■■■□□ 2.03
PAXBP1-201ENST00000290178 ZRANB1Q9UGI0 708 aa27.71■■■□□ 2.03
PAXBP1-201ENST00000290178 NCKAP5LQ9HCH0 1330 aa27.71■■■□□ 2.03
PAXBP1-201ENST00000290178 HMOX1P09601 288 aa27.7■■■□□ 2.03
PAXBP1-201ENST00000290178 NFKBIBQ15653 356 aa27.7■■■□□ 2.02
PAXBP1-201ENST00000290178 TXNDC2Q86VQ3 553 aa27.69■■■□□ 2.02
PAXBP1-201ENST00000290178 ITPRIPQ8IWB1 547 aa27.69■■■□□ 2.02
PAXBP1-201ENST00000290178 RIMBP3CA6NJZ7 1639 aa27.69■■■□□ 2.02
PAXBP1-201ENST00000290178 RIMBP3BA6NNM3 1639 aa27.69■■■□□ 2.02
PAXBP1-201ENST00000290178 RIMBP3Q9UFD9 1639 aa27.69■■■□□ 2.02
PAXBP1-201ENST00000290178 EMILIN1Q9Y6C2 1016 aa27.68■■■□□ 2.02
PAXBP1-201ENST00000290178 KIF20BQ96Q89 1820 aa27.68■■■□□ 2.02
PAXBP1-201ENST00000290178 PHACTR3Q96KR7 559 aa27.68■■■□□ 2.02
PAXBP1-201ENST00000290178 PPP6R1Q9UPN7 881 aa27.68■■■□□ 2.02
PAXBP1-201ENST00000290178 FCHSD2O94868 740 aa27.67■■■□□ 2.02
PAXBP1-201ENST00000290178 ATF7IPQ6VMQ6 1270 aa27.67■■■□□ 2.02
PAXBP1-201ENST00000290178 RSPH6AQ9H0K4 717 aa27.67■■■□□ 2.02
PAXBP1-201ENST00000290178 IL16Q14005 1332 aa27.67■■■□□ 2.02
PAXBP1-201ENST00000290178 NME9Q86XW9 330 aa27.67■■■□□ 2.02
PAXBP1-201ENST00000290178 METP08581 1390 aa27.67■■■□□ 2.02
PAXBP1-201ENST00000290178 AGLP35573 1532 aa27.66■■■□□ 2.02
PAXBP1-201ENST00000290178 THUMPD2Q9BTF0 503 aaKnown RBP27.66■■■□□ 2.02
PAXBP1-201ENST00000290178 VIRMAQ69YN4 1812 aaKnown RBP27.66■■■□□ 2.02
PAXBP1-201ENST00000290178 SPATA31D1Q6ZQQ2 1576 aa27.65■■■□□ 2.02
PAXBP1-201ENST00000290178 PNNQ9H307 717 aaKnown RBP27.65■■■□□ 2.02
PAXBP1-201ENST00000290178 LRRC7Q96NW7 1537 aa27.65■■■□□ 2.02
PAXBP1-201ENST00000290178 WASLO00401 505 aaPredicted RBP27.64■■■□□ 2.02
PAXBP1-201ENST00000290178 TMEM57Q8N5G2 664 aa27.64■■■□□ 2.02
PAXBP1-201ENST00000290178 DLC1Q96QB1 1528 aa27.63■■■□□ 2.01
PAXBP1-201ENST00000290178 SETD1AO15047 1707 aaKnown RBP27.63■■■□□ 2.01
PAXBP1-201ENST00000290178 PPIP5K1Q6PFW1 1433 aa27.62■■■□□ 2.01
PAXBP1-201ENST00000290178 REREQ9P2R6 1566 aa27.62■■■□□ 2.01
PAXBP1-201ENST00000290178 ATP7BP35670 1465 aa27.61■■■□□ 2.01
PAXBP1-201ENST00000290178 DDX19BQ9UMR2 479 aa27.6■■■□□ 2.01
PAXBP1-201ENST00000290178 FAM135BQ49AJ0 1406 aa27.6■■■□□ 2.01
PAXBP1-201ENST00000290178 NUDT16Q96DE0 195 aaKnown RBP27.59■■■□□ 2.01
PAXBP1-201ENST00000290178 MAP2P11137 1827 aaKnown RBP27.58■■■□□ 2.01
PAXBP1-201ENST00000290178 RRS1Q15050 365 aaKnown RBP27.58■■■□□ 2.01
PAXBP1-201ENST00000290178 ESF1Q9H501 851 aaKnown RBP27.57■■■□□ 2
PAXBP1-201ENST00000290178 CPSF1Q10570 1443 aaKnown RBP27.57■■■□□ 2
PAXBP1-201ENST00000290178 NRXN3Q9Y4C0 1643 aa27.57■■■□□ 2
PAXBP1-201ENST00000290178 ZMYM3Q14202 1370 aa27.57■■■□□ 2
PAXBP1-201ENST00000290178 IL13P35225 146 aa27.56■■■□□ 2
PAXBP1-201ENST00000290178 NFE2L2Q16236 605 aa27.56■■■□□ 2
PAXBP1-201ENST00000290178 FRAT2O75474 233 aaPredicted RBP27.55■■■□□ 2
PAXBP1-201ENST00000290178 CDC42BPGQ6DT37 1551 aa27.55■■■□□ 2
PAXBP1-201ENST00000290178 ELL2O00472 640 aaPredicted RBP27.55■■■□□ 2
PAXBP1-201ENST00000290178 ZBTB40Q9NUA8 1239 aa27.55■■■□□ 2
PAXBP1-201ENST00000290178 HDAC1Q13547 482 aaPredicted RBP27.54■■■□□ 2
PAXBP1-201ENST00000290178 TSPYL6Q8N831 410 aa27.54■■■□□ 2
PAXBP1-201ENST00000290178 EDC4Q6P2E9 1401 aaKnown RBP27.54■■■□□ 2
PAXBP1-201ENST00000290178 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.54■■■□□ 2
PAXBP1-201ENST00000290178 KIF16BQ96L93 1317 aa27.53■■■□□ 2
PAXBP1-201ENST00000290178 IPO8O15397 1037 aaKnown RBP27.53■■■□□ 2
PAXBP1-201ENST00000290178 CPS1P31327 1500 aa27.52■■■□□ 2
PAXBP1-201ENST00000290178 ALDH1L2Q3SY69 923 aa27.52■■■□□ 2
PAXBP1-201ENST00000290178 CCDC61Q9Y6R9 512 aa27.52■■■□□ 2
PAXBP1-201ENST00000290178 COG3Q96JB2 828 aa27.51■■□□□ 1.99
PAXBP1-201ENST00000290178 TBC1D32Q96NH3 1257 aa27.51■■□□□ 1.99
PAXBP1-201ENST00000290178 VAMP4O75379 141 aa27.5■■□□□ 1.99
PAXBP1-201ENST00000290178 UPF2Q9HAU5 1272 aaKnown RBP27.5■■□□□ 1.99
PAXBP1-201ENST00000290178 NUTM2FA1L443 756 aa27.49■■□□□ 1.99
PAXBP1-201ENST00000290178 PRR36Q9H6K5 1346 aa27.48■■□□□ 1.99
PAXBP1-201ENST00000290178 FAM83GA6ND36 823 aa27.48■■□□□ 1.99
PAXBP1-201ENST00000290178 SLKQ9H2G2 1235 aaPredicted RBP27.48■■□□□ 1.99
PAXBP1-201ENST00000290178 SMC5Q8IY18 1101 aa27.48■■□□□ 1.99
PAXBP1-201ENST00000290178 MBIPQ9NS73 344 aa27.48■■□□□ 1.99
PAXBP1-201ENST00000290178 DCTN1Q14203 1278 aa27.46■■□□□ 1.99
PAXBP1-201ENST00000290178 BECN1Q14457 450 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms