RNA–Protein interactions for RNA: ENST00000289577.9

TMED4-201, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2 BASIC

Gene TMED4, Length 2,203 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-201ENST00000289577 PIK3C2BO00750 1634 aa25.7■■□□□ 1.71
TMED4-201ENST00000289577 ABCC3O15438 1527 aa25.7■■□□□ 1.71
TMED4-201ENST00000289577 ZBTB40Q9NUA8 1239 aa25.7■■□□□ 1.7
TMED4-201ENST00000289577 CAMSAP1Q5T5Y3 1602 aa25.7■■□□□ 1.7
TMED4-201ENST00000289577 CABP2Q9NPB3 220 aa25.69■■□□□ 1.7
TMED4-201ENST00000289577 NOB1Q9ULX3 412 aaKnown RBP25.69■■□□□ 1.7
TMED4-201ENST00000289577 NEXMIFQ5QGS0 1516 aa25.69■■□□□ 1.7
TMED4-201ENST00000289577 NCOA3Q9Y6Q9 1424 aa25.69■■□□□ 1.7
TMED4-201ENST00000289577 ZNF692Q9BU19 519 aaPredicted RBP25.69■■□□□ 1.7
TMED4-201ENST00000289577 A0A1W2PP64 1363 aa25.69■■□□□ 1.7
TMED4-201ENST00000289577 MLH3Q9UHC1 1453 aa25.68■■□□□ 1.7
TMED4-201ENST00000289577 VGFO15240 615 aaPredicted RBP25.67■■□□□ 1.7
TMED4-201ENST00000289577 TMEM57Q8N5G2 664 aa25.67■■□□□ 1.7
TMED4-201ENST00000289577 TRAK2O60296 914 aa25.67■■□□□ 1.7
TMED4-201ENST00000289577 MED14O60244 1454 aa25.66■■□□□ 1.7
TMED4-201ENST00000289577 U2SURPO15042 1029 aaKnown RBP25.66■■□□□ 1.7
TMED4-201ENST00000289577 DDIT3P35638 169 aa25.66■■□□□ 1.7
TMED4-201ENST00000289577 RBM25P49756 843 aaKnown RBP25.66■■□□□ 1.7
TMED4-201ENST00000289577 ANKRD26Q9UPS8 1709 aa25.66■■□□□ 1.7
TMED4-201ENST00000289577 HSCBQ8IWL3 235 aa25.65■■□□□ 1.7
TMED4-201ENST00000289577 SIGLEC1Q9BZZ2 1709 aa25.65■■□□□ 1.7
TMED4-201ENST00000289577 POGZQ7Z3K3 1410 aa25.65■■□□□ 1.7
TMED4-201ENST00000289577 NUCB1Q02818 461 aa25.65■■□□□ 1.7
TMED4-201ENST00000289577 GGT6Q6P531 493 aa25.65■■□□□ 1.7
TMED4-201ENST00000289577 KIF16BQ96L93 1317 aa25.65■■□□□ 1.7
TMED4-201ENST00000289577 EIF5BO60841 1220 aaKnown RBP25.64■■□□□ 1.7
TMED4-201ENST00000289577 SNX21Q969T3 373 aa25.64■■□□□ 1.69
TMED4-201ENST00000289577 IPO8O15397 1037 aaKnown RBP25.63■■□□□ 1.69
TMED4-201ENST00000289577 DDX11L8A8MPP1 907 aa25.61■■□□□ 1.69
TMED4-201ENST00000289577 ALDH1L2Q3SY69 923 aa25.61■■□□□ 1.69
TMED4-201ENST00000289577 GGNBP2Q9H3C7 697 aa25.61■■□□□ 1.69
TMED4-201ENST00000289577 GZF1Q9H116 711 aaPredicted RBP25.61■■□□□ 1.69
TMED4-201ENST00000289577 RIPK4P57078 832 aa25.6■■□□□ 1.69
TMED4-201ENST00000289577 ZFYVE9O95405 1425 aa25.6■■□□□ 1.69
TMED4-201ENST00000289577 CFAP74Q9C0B2 1584 aa25.6■■□□□ 1.69
TMED4-201ENST00000289577 PNPLA6Q8IY17 1366 aa25.6■■□□□ 1.69
TMED4-201ENST00000289577 FYB1O15117 783 aa25.59■■□□□ 1.69
TMED4-201ENST00000289577 MRE11P49959 708 aa25.59■■□□□ 1.69
TMED4-201ENST00000289577 NUTM2DQ5VT03 806 aaPredicted RBP25.59■■□□□ 1.69
TMED4-201ENST00000289577 PANK2Q9BZ23 570 aa25.59■■□□□ 1.69
TMED4-201ENST00000289577 BRPF1P55201 1214 aaPredicted RBP25.58■■□□□ 1.69
TMED4-201ENST00000289577 CD163L1Q9NR16 1453 aa25.58■■□□□ 1.69
TMED4-201ENST00000289577 PNNQ9H307 717 aaKnown RBP25.57■■□□□ 1.68
TMED4-201ENST00000289577 ATAD2Q6PL18 1390 aa25.57■■□□□ 1.68
TMED4-201ENST00000289577 CHD1LQ86WJ1 897 aa25.57■■□□□ 1.68
TMED4-201ENST00000289577 ISY1Q9ULR0 285 aaKnown RBP25.56■■□□□ 1.68
TMED4-201ENST00000289577 CLTCQ00610 1675 aaKnown RBP25.56■■□□□ 1.68
TMED4-201ENST00000289577 CIZ1Q9ULV3 898 aaPredicted RBP25.56■■□□□ 1.68
TMED4-201ENST00000289577 CDC42BPGQ6DT37 1551 aa25.56■■□□□ 1.68
TMED4-201ENST00000289577 DIAPH1O60610 1272 aaKnown RBP25.55■■□□□ 1.68
TMED4-201ENST00000289577 SRPK2P78362 688 aaKnown RBP25.55■■□□□ 1.68
TMED4-201ENST00000289577 TERF2IPQ9NYB0 399 aa25.55■■□□□ 1.68
TMED4-201ENST00000289577 SAFB2Q14151 953 aaKnown RBP eCLIP25.55■■□□□ 1.68
TMED4-201ENST00000289577 BMP2KLQ5H9B9 411 aa25.55■■□□□ 1.68
TMED4-201ENST00000289577 ZNF428Q96B54 188 aa25.55■■□□□ 1.68
TMED4-201ENST00000289577 LNPKQ9C0E8 428 aa25.55■■□□□ 1.68
TMED4-201ENST00000289577 UBE2Q2Q8WVN8 375 aa25.54■■□□□ 1.68
TMED4-201ENST00000289577 ARXQ96QS3 562 aa25.54■■□□□ 1.68
TMED4-201ENST00000289577 PTPRMP28827 1452 aa25.54■■□□□ 1.68
TMED4-201ENST00000289577 PPIP5K1Q6PFW1 1433 aa25.54■■□□□ 1.68
TMED4-201ENST00000289577 CLCN1P35523 988 aa25.53■■□□□ 1.68
TMED4-201ENST00000289577 ARHGAP31Q2M1Z3 1444 aa25.52■■□□□ 1.68
TMED4-201ENST00000289577 FCHSD2O94868 740 aa25.51■■□□□ 1.67
TMED4-201ENST00000289577 KIF2CQ99661 725 aa25.51■■□□□ 1.67
TMED4-201ENST00000289577 TNPO1Q92973 898 aaKnown RBP25.5■■□□□ 1.67
TMED4-201ENST00000289577 GRPEL1Q9HAV7 217 aa25.5■■□□□ 1.67
TMED4-201ENST00000289577 PIK3R4Q99570 1358 aa25.5■■□□□ 1.67
TMED4-201ENST00000289577 LRRC7Q96NW7 1537 aa25.49■■□□□ 1.67
TMED4-201ENST00000289577 GCC1Q96CN9 775 aa25.49■■□□□ 1.67
TMED4-201ENST00000289577 ZBTB7BO15156 539 aaPredicted RBP25.48■■□□□ 1.67
TMED4-201ENST00000289577 STK26Q9P289 416 aa25.48■■□□□ 1.67
TMED4-201ENST00000289577 IDI1Q13907 227 aa25.48■■□□□ 1.67
TMED4-201ENST00000289577 RAB3GAP1Q15042 981 aa25.48■■□□□ 1.67
TMED4-201ENST00000289577 FAM135BQ49AJ0 1406 aa25.48■■□□□ 1.67
TMED4-201ENST00000289577 ARHGAP45Q92619 1136 aa25.47■■□□□ 1.67
TMED4-201ENST00000289577 CHMP4BQ9H444 224 aaKnown RBP25.47■■□□□ 1.67
TMED4-201ENST00000289577 KIF20BQ96Q89 1820 aa25.47■■□□□ 1.67
TMED4-201ENST00000289577 PTCH1Q13635 1447 aa25.46■■□□□ 1.67
TMED4-201ENST00000289577 HSP90AB1P08238 724 aaKnown RBP25.45■■□□□ 1.67
TMED4-201ENST00000289577 GBP4Q96PP9 640 aa25.45■■□□□ 1.67
TMED4-201ENST00000289577 MRPL50Q8N5N7 158 aaKnown RBP25.44■■□□□ 1.66
TMED4-201ENST00000289577 MINK1Q8N4C8 1332 aaPredicted RBP25.44■■□□□ 1.66
TMED4-201ENST00000289577 HDGFL2Q7Z4V5 671 aaPredicted RBP25.44■■□□□ 1.66
TMED4-201ENST00000289577 SLC52A1Q9NWF4 448 aa25.44■■□□□ 1.66
TMED4-201ENST00000289577 PTMSP20962 102 aa25.43■■□□□ 1.66
TMED4-201ENST00000289577 ANKRD45Q5TZF3 282 aa25.43■■□□□ 1.66
TMED4-201ENST00000289577 PRAM1Q96QH2 718 aa25.43■■□□□ 1.66
TMED4-201ENST00000289577 YTHDC2Q9H6S0 1430 aaKnown RBP25.43■■□□□ 1.66
TMED4-201ENST00000289577 REREQ9P2R6 1566 aa25.43■■□□□ 1.66
TMED4-201ENST00000289577 VAMP4O75379 141 aa25.43■■□□□ 1.66
TMED4-201ENST00000289577 SKOR2Q2VWA4 1001 aaPredicted RBP25.43■■□□□ 1.66
TMED4-201ENST00000289577 MYO5BQ9ULV0 1848 aa25.42■■□□□ 1.66
TMED4-201ENST00000289577 PRKAR2BP31323 418 aa25.41■■□□□ 1.66
TMED4-201ENST00000289577 TBC1D9Q6ZT07 1266 aa25.41■■□□□ 1.66
TMED4-201ENST00000289577 ARHGEF40Q8TER5 1519 aa25.41■■□□□ 1.66
TMED4-201ENST00000289577 TMEM131LA2VDJ0 1609 aa25.4■■□□□ 1.66
TMED4-201ENST00000289577 DIP2CQ9Y2E4 1556 aa25.4■■□□□ 1.66
TMED4-201ENST00000289577 CD2BP2O95400 341 aaKnown RBP25.4■■□□□ 1.66
TMED4-201ENST00000289577 K7ELQ4 463 aaPredicted RBP25.39■■□□□ 1.66
TMED4-201ENST00000289577 NFE2L2Q16236 605 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms