RNA–Protein interactions for RNA: ENST00000278616.8

ATM-201, Transcript of ATM serine/threonine kinase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ATM, Length 13,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-201ENST00000278616 PDCL2Q8N4E4 241 aa8.87□□□□□ -0.99
ATM-201ENST00000278616 L3MBTL2Q969R5 705 aa8.87□□□□□ -0.99
ATM-201ENST00000278616 CNTROBQ8N137 903 aa8.87□□□□□ -0.99
ATM-201ENST00000278616 CEP63Q96MT8 703 aa8.87□□□□□ -0.99
ATM-201ENST00000278616 MAP2K1Q02750 393 aaPredicted RBP8.86□□□□□ -0.99
ATM-201ENST00000278616 TMEM132AQ24JP5 1023 aa8.86□□□□□ -0.99
ATM-201ENST00000278616 PPM1EQ8WY54 764 aa8.86□□□□□ -0.99
ATM-201ENST00000278616 MTMR7Q9Y216 660 aa8.86□□□□□ -0.99
ATM-201ENST00000278616 KRT18P05783 430 aaKnown RBP8.86□□□□□ -0.99
ATM-201ENST00000278616 STAMBPO95630 424 aa8.86□□□□□ -0.99
ATM-201ENST00000278616 MAP9Q49MG5 647 aa8.86□□□□□ -0.99
ATM-201ENST00000278616 CRACR2AQ9BSW2 395 aa8.86□□□□□ -0.99
ATM-201ENST00000278616 FAM107BQ9H098 131 aa8.85□□□□□ -0.99
ATM-201ENST00000278616 CCDC144AA2RUR9 1427 aa8.85□□□□□ -0.99
ATM-201ENST00000278616 MSH5O43196 834 aa8.85□□□□□ -0.99
ATM-201ENST00000278616 LNPKQ9C0E8 428 aa8.85□□□□□ -0.99
ATM-201ENST00000278616 TNMDQ9H2S6 317 aa8.85□□□□□ -0.99
ATM-201ENST00000278616 CBFA2T2O43439 604 aa8.85□□□□□ -0.99
ATM-201ENST00000278616 PRPF40AO75400 957 aaKnown RBP8.85□□□□□ -0.99
ATM-201ENST00000278616 TICAM2Q86XR7 235 aa8.85□□□□□ -0.99
ATM-201ENST00000278616 MCM3P25205 808 aa8.85□□□□□ -0.99
ATM-201ENST00000278616 PANK3Q9H999 370 aa8.85□□□□□ -0.99
ATM-201ENST00000278616 EID1Q9Y6B2 187 aa8.85□□□□□ -0.99
ATM-201ENST00000278616 KIF3BO15066 747 aa8.85□□□□□ -0.99
ATM-201ENST00000278616 CDC45O75419 566 aa8.85□□□□□ -0.99
ATM-201ENST00000278616 IKQ13123 557 aaPredicted RBP8.85□□□□□ -0.99
ATM-201ENST00000278616 CALCOCO1Q9P1Z2 691 aa8.85□□□□□ -0.99
ATM-201ENST00000278616 CFAP45Q9UL16 551 aa8.85□□□□□ -0.99
ATM-201ENST00000278616 BRPF3Q9ULD4 1205 aa8.85□□□□□ -0.99
ATM-201ENST00000278616 FYB1O15117 783 aa8.84□□□□□ -0.99
ATM-201ENST00000278616 DESP17661 470 aa8.84□□□□□ -0.99
ATM-201ENST00000278616 FKBP5Q13451 457 aaPredicted RBP8.84□□□□□ -0.99
ATM-201ENST00000278616 COG3Q96JB2 828 aa8.84□□□□□ -0.99
ATM-201ENST00000278616 HIP1O00291 1037 aa8.84□□□□□ -0.99
ATM-201ENST00000278616 GBP3Q9H0R5 595 aa8.84□□□□□ -0.99
ATM-201ENST00000278616 RSPH4AQ5TD94 716 aa8.84□□□□□ -0.99
ATM-201ENST00000278616 FEZ1Q99689 392 aa8.84□□□□□ -1
ATM-201ENST00000278616 API5Q9BZZ5 524 aaKnown RBP8.84□□□□□ -1
ATM-201ENST00000278616 SLC3A2P08195 630 aaKnown RBP8.83□□□□□ -1
ATM-201ENST00000278616 IL27Q8NEV9 243 aa8.83□□□□□ -1
ATM-201ENST00000278616 EVA1CP58658 441 aa8.83□□□□□ -1
ATM-201ENST00000278616 GPATCH11Q8N954 259 aa8.83□□□□□ -1
ATM-201ENST00000278616 EVC2Q86UK5 1308 aa8.83□□□□□ -1
ATM-201ENST00000278616 CUX2O14529 1486 aa8.83□□□□□ -1
ATM-201ENST00000278616 CCDC148Q8NFR7 591 aa8.83□□□□□ -1
ATM-201ENST00000278616 WASHC4Q2M389 1173 aa8.83□□□□□ -1
ATM-201ENST00000278616 PDCL3Q9H2J4 239 aa8.83□□□□□ -1
ATM-201ENST00000278616 KIAA1328Q86T90 577 aa8.83□□□□□ -1
ATM-201ENST00000278616 ZNF397Q8NF99 534 aaPredicted RBP8.83□□□□□ -1
ATM-201ENST00000278616 ANKRD1Q15327 319 aa8.82□□□□□ -1
ATM-201ENST00000278616 USP47Q96K76 1375 aa8.82□□□□□ -1
ATM-201ENST00000278616 CCDC97Q96F63 343 aaPredicted RBP8.82□□□□□ -1
ATM-201ENST00000278616 STK38Q15208 465 aa8.82□□□□□ -1
ATM-201ENST00000278616 FIBPO43427 364 aa8.82□□□□□ -1
ATM-201ENST00000278616 JAKMIP3Q5VZ66 844 aa8.82□□□□□ -1
ATM-201ENST00000278616 APAF1O14727 1248 aa8.82□□□□□ -1
ATM-201ENST00000278616 CEBPZQ03701 1054 aaKnown RBP8.82□□□□□ -1
ATM-201ENST00000278616 MICALCLQ6ZW33 695 aa8.82□□□□□ -1
ATM-201ENST00000278616 CARMIL2Q6F5E8 1435 aa8.82□□□□□ -1
ATM-201ENST00000278616 C11orf95C9JLR9 678 aaPredicted RBP8.81□□□□□ -1
ATM-201ENST00000278616 GRPEL1Q9HAV7 217 aa8.81□□□□□ -1
ATM-201ENST00000278616 LUZP1Q86V48 1076 aa8.81□□□□□ -1
ATM-201ENST00000278616 NEUROD6Q96NK8 337 aa8.81□□□□□ -1
ATM-201ENST00000278616 AEBP1Q8IUX7 1158 aa8.81□□□□□ -1
ATM-201ENST00000278616 ME1P48163 572 aa8.81□□□□□ -1
ATM-201ENST00000278616 KIF2AO00139 706 aaPredicted RBP8.81□□□□□ -1
ATM-201ENST00000278616 PANK1Q8TE04 598 aa8.81□□□□□ -1
ATM-201ENST00000278616 NEK4P51957 841 aa8.81□□□□□ -1
ATM-201ENST00000278616 TANGO6Q9C0B7 1094 aa8.81□□□□□ -1
ATM-201ENST00000278616 KRT85P78386 507 aa8.81□□□□□ -1
ATM-201ENST00000278616 CFAP57Q96MR6 1250 aa8.81□□□□□ -1
ATM-201ENST00000278616 UBXN4Q92575 508 aa8.81□□□□□ -1
ATM-201ENST00000278616 SEPT11Q9NVA2 429 aaKnown RBP8.8□□□□□ -1
ATM-201ENST00000278616 TRIM21P19474 475 aaKnown RBP8.8□□□□□ -1
ATM-201ENST00000278616 EPB41L2O43491 1005 aaKnown RBP8.8□□□□□ -1
ATM-201ENST00000278616 PRKRIP1Q9H875 184 aaPredicted RBP8.8□□□□□ -1
ATM-201ENST00000278616 SYTL4Q96C24 671 aaPredicted RBP8.8□□□□□ -1
ATM-201ENST00000278616 NACADO15069 1562 aa8.8□□□□□ -1
ATM-201ENST00000278616 RIPK4P57078 832 aa8.8□□□□□ -1
ATM-201ENST00000278616 BCCIPQ9P287 314 aaKnown RBP eCLIP8.8□□□□□ -1
ATM-201ENST00000278616 TBC1D2BQ9UPU7 963 aa8.8□□□□□ -1
ATM-201ENST00000278616 DDX23Q9BUQ8 820 aaKnown RBP8.8□□□□□ -1
ATM-201ENST00000278616 WDR33Q9C0J8 1336 aaKnown RBP8.8□□□□□ -1
ATM-201ENST00000278616 ST20-MTHFSA0A0A6YYL1 179 aa8.8□□□□□ -1
ATM-201ENST00000278616 CARMIL1Q5VZK9 1371 aa8.79□□□□□ -1
ATM-201ENST00000278616 HMOX1P09601 288 aa8.79□□□□□ -1
ATM-201ENST00000278616 CASQ1P31415 396 aa8.79□□□□□ -1
ATM-201ENST00000278616 ARHGAP29Q52LW3 1261 aa8.79□□□□□ -1
ATM-201ENST00000278616 NUTM2GQ5VZR2 741 aa8.79□□□□□ -1
ATM-201ENST00000278616 CCDC113Q9H0I3 377 aa8.79□□□□□ -1
ATM-201ENST00000278616 MINK1Q8N4C8 1332 aaPredicted RBP8.79□□□□□ -1
ATM-201ENST00000278616 ANAPC15P60006 121 aa8.79□□□□□ -1
ATM-201ENST00000278616 IMMTQ16891 758 aaKnown RBP8.79□□□□□ -1
ATM-201ENST00000278616 RUNDC1Q96C34 613 aa8.79□□□□□ -1
ATM-201ENST00000278616 ESPNB1AK53 854 aa8.79□□□□□ -1
ATM-201ENST00000278616 IPO4Q8TEX9 1081 aaKnown RBP8.79□□□□□ -1
ATM-201ENST00000278616 GCOM1H8Y6P7 765 aaPredicted RBP8.79□□□□□ -1
ATM-201ENST00000278616 MYZAPP0CAP1 466 aa8.79□□□□□ -1
ATM-201ENST00000278616 UBTFL1P0CB47 393 aaPredicted RBP8.79□□□□□ -1
ATM-201ENST00000278616 SMTNL1A8MU46 457 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms