RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 RGPD8O14715 1765 aaPredicted RBP29.29■■■□□ 2.28
CCDC7-201ENST00000277657 NWD1Q149M9 1564 aa29.29■■■□□ 2.28
CCDC7-201ENST00000277657 USP6P35125 1406 aa29.28■■■□□ 2.28
CCDC7-201ENST00000277657 PNPLA6Q8IY17 1366 aa29.28■■■□□ 2.28
CCDC7-201ENST00000277657 CCDC146Q8IYE0 955 aa29.27■■■□□ 2.28
CCDC7-201ENST00000277657 ZNF521Q96K83 1311 aa29.26■■■□□ 2.27
CCDC7-201ENST00000277657 SSH2Q76I76 1423 aa29.25■■■□□ 2.27
CCDC7-201ENST00000277657 TTC21BQ7Z4L5 1316 aa29.24■■■□□ 2.27
CCDC7-201ENST00000277657 NGEFQ8N5V2 710 aa29.23■■■□□ 2.27
CCDC7-201ENST00000277657 AATKQ6ZMQ8 1374 aa29.23■■■□□ 2.27
CCDC7-201ENST00000277657 ADGRL3Q9HAR2 1447 aa29.22■■■□□ 2.27
CCDC7-201ENST00000277657 APAF1O14727 1248 aa29.22■■■□□ 2.27
CCDC7-201ENST00000277657 COG3Q96JB2 828 aa29.21■■■□□ 2.27
CCDC7-201ENST00000277657 POLKQ9UBT6 870 aa29.21■■■□□ 2.27
CCDC7-201ENST00000277657 ZRANB1Q9UGI0 708 aa29.21■■■□□ 2.27
CCDC7-201ENST00000277657 MAP2P11137 1827 aaKnown RBP29.21■■■□□ 2.27
CCDC7-201ENST00000277657 CDCA7LQ96GN5 454 aa29.21■■■□□ 2.27
CCDC7-201ENST00000277657 KDM4FA0A1W2PPD8 638 aa29.19■■■□□ 2.26
CCDC7-201ENST00000277657 RUNDC1Q96C34 613 aa29.19■■■□□ 2.26
CCDC7-201ENST00000277657 PMFBP1Q8TBY8 1022 aa29.18■■■□□ 2.26
CCDC7-201ENST00000277657 RNF123Q5XPI4 1314 aa29.18■■■□□ 2.26
CCDC7-201ENST00000277657 OVOS2A0A0J9YW53 1432 aa29.17■■■□□ 2.26
CCDC7-201ENST00000277657 OVOS2Q6IE36 1432 aa29.17■■■□□ 2.26
CCDC7-201ENST00000277657 IQSEC2Q5JU85 1478 aa29.17■■■□□ 2.26
CCDC7-201ENST00000277657 TTC21AQ8NDW8 1320 aa29.16■■■□□ 2.26
CCDC7-201ENST00000277657 NGDNQ8NEJ9 315 aaKnown RBP29.15■■■□□ 2.26
CCDC7-201ENST00000277657 U2AF1L5P0DN76 240 aaPredicted RBP29.14■■■□□ 2.26
CCDC7-201ENST00000277657 FBLN1P23142 703 aa29.14■■■□□ 2.26
CCDC7-201ENST00000277657 U2AF1Q01081 240 aaKnown RBP eCLIP29.14■■■□□ 2.26
CCDC7-201ENST00000277657 CDK12Q9NYV4 1490 aaPredicted RBP29.14■■■□□ 2.25
CCDC7-201ENST00000277657 DIAPH1O60610 1272 aaKnown RBP29.13■■■□□ 2.25
CCDC7-201ENST00000277657 RBM33Q96EV2 1170 aaKnown RBP29.13■■■□□ 2.25
CCDC7-201ENST00000277657 GOLGA2Q08379 1002 aa29.12■■■□□ 2.25
CCDC7-201ENST00000277657 EMILIN1Q9Y6C2 1016 aa29.1■■■□□ 2.25
CCDC7-201ENST00000277657 USP31Q70CQ4 1352 aa29.1■■■□□ 2.25
CCDC7-201ENST00000277657 NCBP3Q53F19 620 aaKnown RBP29.1■■■□□ 2.25
CCDC7-201ENST00000277657 ERICH6BQ5W0A0 696 aa29.1■■■□□ 2.25
CCDC7-201ENST00000277657 TCP11L2Q8N4U5 519 aa29.08■■■□□ 2.25
CCDC7-201ENST00000277657 U2SURPO15042 1029 aaKnown RBP29.08■■■□□ 2.25
CCDC7-201ENST00000277657 LMTK3Q96Q04 1460 aa29.07■■■□□ 2.24
CCDC7-201ENST00000277657 PHF23Q9BUL5 403 aaPredicted RBP29.07■■■□□ 2.24
CCDC7-201ENST00000277657 PIK3C2AO00443 1686 aa29.06■■■□□ 2.24
CCDC7-201ENST00000277657 PPM1GO15355 546 aaPredicted RBP29.06■■■□□ 2.24
CCDC7-201ENST00000277657 IRX6P78412 446 aaPredicted RBP29.06■■■□□ 2.24
CCDC7-201ENST00000277657 SLFN5Q08AF3 891 aa29.06■■■□□ 2.24
CCDC7-201ENST00000277657 DUSP27Q5VZP5 1158 aa29.06■■■□□ 2.24
CCDC7-201ENST00000277657 TRMT2AQ8IZ69 625 aaKnown RBP29.06■■■□□ 2.24
CCDC7-201ENST00000277657 PLEKHF1Q96S99 279 aa29.06■■■□□ 2.24
CCDC7-201ENST00000277657 HSPA2P54652 639 aa29.06■■■□□ 2.24
CCDC7-201ENST00000277657 RCAN3Q9UKA8 241 aa29.06■■■□□ 2.24
CCDC7-201ENST00000277657 PHF8Q9UPP1 1060 aa29.06■■■□□ 2.24
CCDC7-201ENST00000277657 PROSER2Q86WR7 435 aaPredicted RBP29.05■■■□□ 2.24
CCDC7-201ENST00000277657 WWC1Q8IX03 1113 aa29.04■■■□□ 2.24
CCDC7-201ENST00000277657 RRS1Q15050 365 aaKnown RBP29.04■■■□□ 2.24
CCDC7-201ENST00000277657 USP54Q70EL1 1684 aa29.03■■■□□ 2.24
CCDC7-201ENST00000277657 CCDC27Q2M243 656 aa29.03■■■□□ 2.24
CCDC7-201ENST00000277657 C14orf37Q86TY3 774 aa29.03■■■□□ 2.24
CCDC7-201ENST00000277657 STRCP1A6NGW2 1772 aa29.03■■■□□ 2.24
CCDC7-201ENST00000277657 IL13P35225 146 aa29.01■■■□□ 2.23
CCDC7-201ENST00000277657 E9PSI1 815 aa29■■■□□ 2.23
CCDC7-201ENST00000277657 FCHSD2O94868 740 aa29■■■□□ 2.23
CCDC7-201ENST00000277657 PNNQ9H307 717 aaKnown RBP29■■■□□ 2.23
CCDC7-201ENST00000277657 LRRC7Q96NW7 1537 aa28.99■■■□□ 2.23
CCDC7-201ENST00000277657 SPINK5Q9NQ38 1064 aaPredicted RBP28.99■■■□□ 2.23
CCDC7-201ENST00000277657 RRP7AQ9Y3A4 280 aaKnown RBP28.99■■■□□ 2.23
CCDC7-201ENST00000277657 MARF1Q9Y4F3 1742 aaKnown RBP28.98■■■□□ 2.23
CCDC7-201ENST00000277657 NCOA3Q9Y6Q9 1424 aa28.98■■■□□ 2.23
CCDC7-201ENST00000277657 STRCQ7RTU9 1775 aa28.97■■■□□ 2.23
CCDC7-201ENST00000277657 C19orf44Q9H6X5 657 aa28.97■■■□□ 2.23
CCDC7-201ENST00000277657 DMRT2Q9Y5R5 561 aa28.97■■■□□ 2.23
CCDC7-201ENST00000277657 NEUROD2Q15784 382 aa28.96■■■□□ 2.23
CCDC7-201ENST00000277657 ESCO1Q5FWF5 840 aa28.96■■■□□ 2.23
CCDC7-201ENST00000277657 PEAK1Q9H792 1746 aa28.96■■■□□ 2.23
CCDC7-201ENST00000277657 WDR63Q8IWG1 891 aa28.95■■■□□ 2.23
CCDC7-201ENST00000277657 RSPH6AQ9H0K4 717 aa28.95■■■□□ 2.23
CCDC7-201ENST00000277657 RRP1P56182 461 aaKnown RBP28.95■■■□□ 2.22
CCDC7-201ENST00000277657 MAPK8IP3Q9UPT6 1336 aa28.94■■■□□ 2.22
CCDC7-201ENST00000277657 TMEM94Q12767 1356 aa28.93■■■□□ 2.22
CCDC7-201ENST00000277657 TMPOP42166 694 aaKnown RBP28.93■■■□□ 2.22
CCDC7-201ENST00000277657 DCCP43146 1447 aa28.92■■■□□ 2.22
CCDC7-201ENST00000277657 NLRP6P59044 892 aa28.91■■■□□ 2.22
CCDC7-201ENST00000277657 C1orf167Q5SNV9 1468 aa28.9■■■□□ 2.22
CCDC7-201ENST00000277657 MAP3K19Q56UN5 1328 aa28.9■■■□□ 2.22
CCDC7-201ENST00000277657 ABTB2Q8N961 1025 aa28.89■■■□□ 2.22
CCDC7-201ENST00000277657 ORAI2Q96SN7 254 aa28.89■■■□□ 2.22
CCDC7-201ENST00000277657 KIF1AQ12756 1690 aa28.88■■■□□ 2.21
CCDC7-201ENST00000277657 PRKAR2BP31323 418 aa28.88■■■□□ 2.21
CCDC7-201ENST00000277657 PPP4R2Q9NY27 417 aa28.88■■■□□ 2.21
CCDC7-201ENST00000277657 SBNO1A3KN83 1393 aa28.88■■■□□ 2.21
CCDC7-201ENST00000277657 PAK3O75914 559 aaPredicted RBP28.87■■■□□ 2.21
CCDC7-201ENST00000277657 PSME1Q06323 249 aa28.87■■■□□ 2.21
CCDC7-201ENST00000277657 EIF4A2Q14240 407 aaKnown RBP28.87■■■□□ 2.21
CCDC7-201ENST00000277657 TRIM35Q9UPQ4 493 aa28.86■■■□□ 2.21
CCDC7-201ENST00000277657 RGPD1P0DJD0 1748 aa28.85■■■□□ 2.21
CCDC7-201ENST00000277657 FLT4P35916 1363 aa28.85■■■□□ 2.21
CCDC7-201ENST00000277657 HMOX1P09601 288 aa28.85■■■□□ 2.21
CCDC7-201ENST00000277657 KIF24Q5T7B8 1368 aa28.85■■■□□ 2.21
CCDC7-201ENST00000277657 SOX12O15370 315 aa28.85■■■□□ 2.21
CCDC7-201ENST00000277657 HSP90AB2PQ58FF8 381 aa28.85■■■□□ 2.21
CCDC7-201ENST00000277657 MST1RQ04912 1400 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms