RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 PLEKHF1Q96S99 279 aa23.38■■□□□ 1.33
SSC4D-201ENST00000275560 IFT172Q9UG01 1749 aa23.38■■□□□ 1.33
SSC4D-201ENST00000275560 VWDEQ8N2E2 1590 aa23.38■■□□□ 1.33
SSC4D-201ENST00000275560 ATP7AQ04656 1500 aa23.37■■□□□ 1.33
SSC4D-201ENST00000275560 CHD1LQ86WJ1 897 aa23.37■■□□□ 1.33
SSC4D-201ENST00000275560 RAB3GAP1Q15042 981 aa23.36■■□□□ 1.33
SSC4D-201ENST00000275560 SSFA2P28290 1259 aa23.36■■□□□ 1.33
SSC4D-201ENST00000275560 RIPK4P57078 832 aa23.36■■□□□ 1.33
SSC4D-201ENST00000275560 ANKRD45Q5TZF3 282 aa23.36■■□□□ 1.33
SSC4D-201ENST00000275560 SNX21Q969T3 373 aa23.36■■□□□ 1.33
SSC4D-201ENST00000275560 C14orf93Q9H972 538 aaKnown RBP23.35■■□□□ 1.33
SSC4D-201ENST00000275560 MROH1Q8NDA8 1641 aa23.35■■□□□ 1.33
SSC4D-201ENST00000275560 ADGRB2O60241 1585 aa23.35■■□□□ 1.33
SSC4D-201ENST00000275560 NRXN1Q9ULB1 1477 aa23.35■■□□□ 1.33
SSC4D-201ENST00000275560 GBP4Q96PP9 640 aa23.34■■□□□ 1.33
SSC4D-201ENST00000275560 ZC3H13Q5T200 1668 aaKnown RBP23.33■■□□□ 1.33
SSC4D-201ENST00000275560 AK9Q5TCS8 1911 aa23.33■■□□□ 1.32
SSC4D-201ENST00000275560 CT47B1P0C2W7 299 aaPredicted RBP23.32■■□□□ 1.32
SSC4D-201ENST00000275560 GAS2L2Q8NHY3 880 aa23.32■■□□□ 1.32
SSC4D-201ENST00000275560 GLIPR1L2Q4G1C9 344 aa23.31■■□□□ 1.32
SSC4D-201ENST00000275560 PKNOX2Q96KN3 472 aa23.31■■□□□ 1.32
SSC4D-201ENST00000275560 PPRC1Q5VV67 1664 aaKnown RBP23.31■■□□□ 1.32
SSC4D-201ENST00000275560 TBC1D9Q6ZT07 1266 aa23.3■■□□□ 1.32
SSC4D-201ENST00000275560 ZMYND15Q9H091 742 aa23.3■■□□□ 1.32
SSC4D-201ENST00000275560 EFCAB6Q5THR3 1501 aa23.29■■□□□ 1.32
SSC4D-201ENST00000275560 RRP9O43818 475 aaKnown RBP23.29■■□□□ 1.32
SSC4D-201ENST00000275560 ADGRB1O14514 1584 aa23.29■■□□□ 1.32
SSC4D-201ENST00000275560 ANKRD36BQ8N2N9 1353 aa23.29■■□□□ 1.32
SSC4D-201ENST00000275560 FBLN1P23142 703 aa23.28■■□□□ 1.32
SSC4D-201ENST00000275560 INO80Q9ULG1 1556 aaPredicted RBP23.28■■□□□ 1.32
SSC4D-201ENST00000275560 STK26Q9P289 416 aa23.28■■□□□ 1.32
SSC4D-201ENST00000275560 FANCAO15360 1455 aa23.28■■□□□ 1.32
SSC4D-201ENST00000275560 EVC2Q86UK5 1308 aa23.28■■□□□ 1.32
SSC4D-201ENST00000275560 K7ELQ4 463 aaPredicted RBP23.28■■□□□ 1.32
SSC4D-201ENST00000275560 ELL2O00472 640 aaPredicted RBP23.28■■□□□ 1.32
SSC4D-201ENST00000275560 THUMPD2Q9BTF0 503 aaKnown RBP23.28■■□□□ 1.32
SSC4D-201ENST00000275560 NEURL4Q96JN8 1562 aa23.27■■□□□ 1.32
SSC4D-201ENST00000275560 TULP4Q9NRJ4 1543 aa23.27■■□□□ 1.32
SSC4D-201ENST00000275560 BMP2KLQ5H9B9 411 aa23.27■■□□□ 1.32
SSC4D-201ENST00000275560 CIZ1Q9ULV3 898 aaPredicted RBP23.27■■□□□ 1.32
SSC4D-201ENST00000275560 GGT6Q6P531 493 aa23.27■■□□□ 1.32
SSC4D-201ENST00000275560 SETBP1Q9Y6X0 1596 aa23.26■■□□□ 1.31
SSC4D-201ENST00000275560 KIF16BQ96L93 1317 aa23.26■■□□□ 1.31
SSC4D-201ENST00000275560 A0A1W2PP64 1363 aa23.26■■□□□ 1.31
SSC4D-201ENST00000275560 PPIP5K1Q6PFW1 1433 aa23.26■■□□□ 1.31
SSC4D-201ENST00000275560 USP32Q8NFA0 1604 aa23.26■■□□□ 1.31
SSC4D-201ENST00000275560 IPO8O15397 1037 aaKnown RBP23.26■■□□□ 1.31
SSC4D-201ENST00000275560 ISY1Q9ULR0 285 aaKnown RBP23.26■■□□□ 1.31
SSC4D-201ENST00000275560 ABCC11Q96J66 1382 aa23.25■■□□□ 1.31
SSC4D-201ENST00000275560 ADGRL1O94910 1474 aa23.25■■□□□ 1.31
SSC4D-201ENST00000275560 ADGRB3O60242 1522 aa23.25■■□□□ 1.31
SSC4D-201ENST00000275560 SRPK2P78362 688 aaKnown RBP23.25■■□□□ 1.31
SSC4D-201ENST00000275560 NASPP49321 788 aaPredicted RBP23.24■■□□□ 1.31
SSC4D-201ENST00000275560 DDX49Q9Y6V7 483 aaKnown RBP23.24■■□□□ 1.31
SSC4D-201ENST00000275560 SKOR2Q2VWA4 1001 aaPredicted RBP23.23■■□□□ 1.31
SSC4D-201ENST00000275560 SIRT2Q8IXJ6 389 aa23.23■■□□□ 1.31
SSC4D-201ENST00000275560 ZBTB7BO15156 539 aaPredicted RBP23.22■■□□□ 1.31
SSC4D-201ENST00000275560 TSPYL6Q8N831 410 aa23.22■■□□□ 1.31
SSC4D-201ENST00000275560 NCLP19338 710 aaKnown RBP23.22■■□□□ 1.31
SSC4D-201ENST00000275560 NCBP3Q53F19 620 aaKnown RBP23.22■■□□□ 1.31
SSC4D-201ENST00000275560 KIAA1211Q6ZU35 1233 aa23.22■■□□□ 1.31
SSC4D-201ENST00000275560 CFAP74Q9C0B2 1584 aa23.21■■□□□ 1.31
SSC4D-201ENST00000275560 BAG4O95429 457 aaKnown RBP23.21■■□□□ 1.31
SSC4D-201ENST00000275560 PPLO60437 1756 aa23.21■■□□□ 1.31
SSC4D-201ENST00000275560 FYB1O15117 783 aa23.2■■□□□ 1.3
SSC4D-201ENST00000275560 PKP1Q13835 747 aa23.2■■□□□ 1.3
SSC4D-201ENST00000275560 COL3A1P02461 1466 aaPredicted RBP23.2■■□□□ 1.3
SSC4D-201ENST00000275560 ATAD2Q6PL18 1390 aa23.2■■□□□ 1.3
SSC4D-201ENST00000275560 MCTP1Q6DN14 999 aa23.19■■□□□ 1.3
SSC4D-201ENST00000275560 NSD2O96028 1365 aa23.19■■□□□ 1.3
SSC4D-201ENST00000275560 NPATQ14207 1427 aa23.19■■□□□ 1.3
SSC4D-201ENST00000275560 DIAPH1O60610 1272 aaKnown RBP23.18■■□□□ 1.3
SSC4D-201ENST00000275560 IL16Q14005 1332 aa23.18■■□□□ 1.3
SSC4D-201ENST00000275560 GLI2P10070 1586 aa23.18■■□□□ 1.3
SSC4D-201ENST00000275560 CHAMP1Q96JM3 812 aa23.18■■□□□ 1.3
SSC4D-201ENST00000275560 GSPT1P15170 499 aaKnown RBP23.17■■□□□ 1.3
SSC4D-201ENST00000275560 CCDC173Q0VFZ6 552 aa23.17■■□□□ 1.3
SSC4D-201ENST00000275560 MINK1Q8N4C8 1332 aaPredicted RBP23.17■■□□□ 1.3
SSC4D-201ENST00000275560 HMOX1P09601 288 aa23.17■■□□□ 1.3
SSC4D-201ENST00000275560 PRKAR2BP31323 418 aa23.17■■□□□ 1.3
SSC4D-201ENST00000275560 CAVIN1Q6NZI2 390 aaKnown RBP23.17■■□□□ 1.3
SSC4D-201ENST00000275560 ALDH1L2Q3SY69 923 aa23.16■■□□□ 1.3
SSC4D-201ENST00000275560 PHACTR3Q96KR7 559 aa23.15■■□□□ 1.3
SSC4D-201ENST00000275560 GOLGA6L22H0YM25 854 aa23.15■■□□□ 1.3
SSC4D-201ENST00000275560 C16orf71Q8IYS4 520 aaPredicted RBP23.15■■□□□ 1.3
SSC4D-201ENST00000275560 PPP1R9BQ96SB3 815 aa23.15■■□□□ 1.3
SSC4D-201ENST00000275560 RBM10P98175 930 aaKnown RBP23.14■■□□□ 1.3
SSC4D-201ENST00000275560 KLHL40Q2TBA0 621 aa23.14■■□□□ 1.3
SSC4D-201ENST00000275560 GCC1Q96CN9 775 aa23.14■■□□□ 1.3
SSC4D-201ENST00000275560 ZSCAN30Q86W11 494 aa23.14■■□□□ 1.29
SSC4D-201ENST00000275560 MRPL50Q8N5N7 158 aaKnown RBP23.14■■□□□ 1.29
SSC4D-201ENST00000275560 VAMP4O75379 141 aa23.14■■□□□ 1.29
SSC4D-201ENST00000275560 ARHGEF28Q8N1W1 1705 aaKnown RBP23.13■■□□□ 1.29
SSC4D-201ENST00000275560 CDC45O75419 566 aa23.12■■□□□ 1.29
SSC4D-201ENST00000275560 RBM27Q9P2N5 1060 aaKnown RBP23.12■■□□□ 1.29
SSC4D-201ENST00000275560 ABCA9Q8IUA7 1624 aa23.12■■□□□ 1.29
SSC4D-201ENST00000275560 MED14O60244 1454 aa23.12■■□□□ 1.29
SSC4D-201ENST00000275560 CAMSAP1Q5T5Y3 1602 aa23.11■■□□□ 1.29
SSC4D-201ENST00000275560 KIDINS220Q9ULH0 1771 aa23.11■■□□□ 1.29
SSC4D-201ENST00000275560 ARAP3Q8WWN8 1544 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms