RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 TXNDC2Q86VQ3 553 aa14.02□□□□□ -0.16
VPS33A-201ENST00000267199 K7ELQ4 463 aaPredicted RBP14.02□□□□□ -0.16
VPS33A-201ENST00000267199 THUMPD2Q9BTF0 503 aaKnown RBP14.02□□□□□ -0.16
VPS33A-201ENST00000267199 PZPP20742 1482 aa14.02□□□□□ -0.17
VPS33A-201ENST00000267199 PER1O15534 1290 aaPredicted RBP14.02□□□□□ -0.17
VPS33A-201ENST00000267199 IGHDP01880 384 aa14.02□□□□□ -0.17
VPS33A-201ENST00000267199 FBXW7Q969H0 707 aa14.02□□□□□ -0.17
VPS33A-201ENST00000267199 DIAPH3Q9NSV4 1193 aa14.02□□□□□ -0.17
VPS33A-201ENST00000267199 ISY1Q9ULR0 285 aaKnown RBP14.02□□□□□ -0.17
VPS33A-201ENST00000267199 CCDC27Q2M243 656 aa14.01□□□□□ -0.17
VPS33A-201ENST00000267199 CHD1LQ86WJ1 897 aa14.01□□□□□ -0.17
VPS33A-201ENST00000267199 CCDC9Q9Y3X0 531 aaKnown RBP14.01□□□□□ -0.17
VPS33A-201ENST00000267199 SF3A1Q15459 793 aaKnown RBP14.01□□□□□ -0.17
VPS33A-201ENST00000267199 SULT6B1Q6IMI4 303 aa14.01□□□□□ -0.17
VPS33A-201ENST00000267199 ZSCAN30Q86W11 494 aa14.01□□□□□ -0.17
VPS33A-201ENST00000267199 H3BQV1 296 aa14.01□□□□□ -0.17
VPS33A-201ENST00000267199 IFFO2Q5TF58 517 aa14.01□□□□□ -0.17
VPS33A-201ENST00000267199 MTERF4Q7Z6M4 381 aaKnown RBP14.01□□□□□ -0.17
VPS33A-201ENST00000267199 TPM4P67936 248 aa14□□□□□ -0.17
VPS33A-201ENST00000267199 NUTM2GQ5VZR2 741 aa14□□□□□ -0.17
VPS33A-201ENST00000267199 BICD2Q8TD16 824 aa14□□□□□ -0.17
VPS33A-201ENST00000267199 PRDM10Q9NQV6 1147 aa14□□□□□ -0.17
VPS33A-201ENST00000267199 C9orf78Q9NZ63 289 aaPredicted RBP14□□□□□ -0.17
VPS33A-201ENST00000267199 SMC3Q9UQE7 1217 aa14□□□□□ -0.17
VPS33A-201ENST00000267199 TEX14Q8IWB6 1497 aa14□□□□□ -0.17
VPS33A-201ENST00000267199 FCHSD2O94868 740 aa13.99□□□□□ -0.17
VPS33A-201ENST00000267199 XRCC6P12956 609 aaKnown RBP eCLIP13.99□□□□□ -0.17
VPS33A-201ENST00000267199 RABEP1Q15276 862 aa13.99□□□□□ -0.17
VPS33A-201ENST00000267199 ATAD2Q6PL18 1390 aa13.99□□□□□ -0.17
VPS33A-201ENST00000267199 SPC24Q8NBT2 197 aa13.99□□□□□ -0.17
VPS33A-201ENST00000267199 MBD3O95983 291 aa13.98□□□□□ -0.17
VPS33A-201ENST00000267199 GORABQ5T7V8 394 aa13.98□□□□□ -0.17
VPS33A-201ENST00000267199 XPCQ01831 940 aaPredicted RBP13.98□□□□□ -0.17
VPS33A-201ENST00000267199 TSPY26PQ9H489 355 aa13.98□□□□□ -0.17
VPS33A-201ENST00000267199 FIBPO43427 364 aa13.98□□□□□ -0.17
VPS33A-201ENST00000267199 RRS1Q15050 365 aaKnown RBP13.98□□□□□ -0.17
VPS33A-201ENST00000267199 CREBRFQ8IUR6 639 aa13.98□□□□□ -0.17
VPS33A-201ENST00000267199 FAM184AQ8NB25 1140 aa13.98□□□□□ -0.17
VPS33A-201ENST00000267199 NLRP6P59044 892 aa13.98□□□□□ -0.17
VPS33A-201ENST00000267199 C1orf141Q5JVX7 400 aa13.98□□□□□ -0.17
VPS33A-201ENST00000267199 ITSN2Q9NZM3 1697 aa13.97□□□□□ -0.17
VPS33A-201ENST00000267199 SLC4A2P04920 1241 aa13.97□□□□□ -0.17
VPS33A-201ENST00000267199 KIAA0556O60303 1618 aa13.97□□□□□ -0.17
VPS33A-201ENST00000267199 PODXL2Q9NZ53 605 aa13.97□□□□□ -0.17
VPS33A-201ENST00000267199 FAM135AQ9P2D6 1515 aa13.96□□□□□ -0.17
VPS33A-201ENST00000267199 C8orf34Q49A92 452 aa13.96□□□□□ -0.17
VPS33A-201ENST00000267199 TNPO1Q92973 898 aaKnown RBP13.96□□□□□ -0.17
VPS33A-201ENST00000267199 PLEKHH1Q9ULM0 1364 aa13.96□□□□□ -0.17
VPS33A-201ENST00000267199 NPHP1O15259 732 aa13.96□□□□□ -0.17
VPS33A-201ENST00000267199 RUFY2Q8WXA3 655 aa13.96□□□□□ -0.17
VPS33A-201ENST00000267199 TRIM27P14373 513 aa13.96□□□□□ -0.18
VPS33A-201ENST00000267199 FOSBP53539 338 aa13.96□□□□□ -0.18
VPS33A-201ENST00000267199 NFE2L2Q16236 605 aa13.96□□□□□ -0.18
VPS33A-201ENST00000267199 MAGI3Q5TCQ9 1506 aa13.95□□□□□ -0.18
VPS33A-201ENST00000267199 UBTFL1P0CB47 393 aaPredicted RBP13.95□□□□□ -0.18
VPS33A-201ENST00000267199 CIZ1Q9ULV3 898 aaPredicted RBP13.95□□□□□ -0.18
VPS33A-201ENST00000267199 NOS1P29475 1434 aa13.95□□□□□ -0.18
VPS33A-201ENST00000267199 ADAMTS12P58397 1594 aa13.95□□□□□ -0.18
VPS33A-201ENST00000267199 GPRASP1Q5JY77 1395 aa13.95□□□□□ -0.18
VPS33A-201ENST00000267199 SYCE3A1L190 88 aa13.95□□□□□ -0.18
VPS33A-201ENST00000267199 IFIT2P09913 472 aaKnown RBP13.95□□□□□ -0.18
VPS33A-201ENST00000267199 ZKSCAN1P17029 563 aaPredicted RBP13.95□□□□□ -0.18
VPS33A-201ENST00000267199 SSFA2P28290 1259 aa13.95□□□□□ -0.18
VPS33A-201ENST00000267199 HOMER1Q86YM7 354 aa13.95□□□□□ -0.18
VPS33A-201ENST00000267199 ADGRL1O94910 1474 aa13.95□□□□□ -0.18
VPS33A-201ENST00000267199 DNMT1P26358 1616 aaKnown RBP13.95□□□□□ -0.18
VPS33A-201ENST00000267199 RTEL1-TNFRSF6BF6WH68 1400 aa13.95□□□□□ -0.18
VPS33A-201ENST00000267199 HMGN5P82970 282 aaKnown RBP13.94□□□□□ -0.18
VPS33A-201ENST00000267199 WAPLQ7Z5K2 1190 aa13.94□□□□□ -0.18
VPS33A-201ENST00000267199 ZNF428Q96B54 188 aa13.94□□□□□ -0.18
VPS33A-201ENST00000267199 GNAI3P08754 354 aa13.94□□□□□ -0.18
VPS33A-201ENST00000267199 IDI1Q13907 227 aa13.94□□□□□ -0.18
VPS33A-201ENST00000267199 PCDHB15Q9Y5E8 787 aa13.94□□□□□ -0.18
VPS33A-201ENST00000267199 SYCP2Q9BX26 1530 aa13.94□□□□□ -0.18
VPS33A-201ENST00000267199 SURF6O75683 361 aaKnown RBP13.94□□□□□ -0.18
VPS33A-201ENST00000267199 TRIM5Q9C035 493 aa13.93□□□□□ -0.18
VPS33A-201ENST00000267199 C14orf93Q9H972 538 aaKnown RBP13.93□□□□□ -0.18
VPS33A-201ENST00000267199 TAF7LQ5H9L4 462 aa13.93□□□□□ -0.18
VPS33A-201ENST00000267199 SASS6Q6UVJ0 657 aa13.93□□□□□ -0.18
VPS33A-201ENST00000267199 DCTN1Q14203 1278 aa13.93□□□□□ -0.18
VPS33A-201ENST00000267199 GOLGA6L1Q8N7Z2 621 aa13.93□□□□□ -0.18
VPS33A-201ENST00000267199 ARHGEF12Q9NZN5 1544 aa13.92□□□□□ -0.18
VPS33A-201ENST00000267199 NEXNQ0ZGT2 675 aa13.92□□□□□ -0.18
VPS33A-201ENST00000267199 RNF123Q5XPI4 1314 aa13.92□□□□□ -0.18
VPS33A-201ENST00000267199 TBC1D32Q96NH3 1257 aa13.92□□□□□ -0.18
VPS33A-201ENST00000267199 SAMD9Q5K651 1589 aa13.92□□□□□ -0.18
VPS33A-201ENST00000267199 SPATA31E1Q6ZUB1 1445 aa13.92□□□□□ -0.18
VPS33A-201ENST00000267199 CLCN1P35523 988 aa13.91□□□□□ -0.18
VPS33A-201ENST00000267199 PSME1Q06323 249 aa13.91□□□□□ -0.18
VPS33A-201ENST00000267199 GAS2L2Q8NHY3 880 aa13.91□□□□□ -0.18
VPS33A-201ENST00000267199 ASXL1Q8IXJ9 1541 aa13.91□□□□□ -0.18
VPS33A-201ENST00000267199 GNAI2P04899 355 aa13.91□□□□□ -0.18
VPS33A-201ENST00000267199 CCDC30Q5VVM6 783 aa13.91□□□□□ -0.18
VPS33A-201ENST00000267199 DISP1Q96F81 1524 aa13.91□□□□□ -0.18
VPS33A-201ENST00000267199 TPD52L1Q16890 204 aaPredicted RBP13.91□□□□□ -0.18
VPS33A-201ENST00000267199 ZNF692Q9BU19 519 aaPredicted RBP13.91□□□□□ -0.18
VPS33A-201ENST00000267199 SPINK5Q9NQ38 1064 aaPredicted RBP13.91□□□□□ -0.18
VPS33A-201ENST00000267199 NUP160Q12769 1436 aa13.91□□□□□ -0.18
VPS33A-201ENST00000267199 UHRF1BP1Q6BDS2 1440 aa13.91□□□□□ -0.18
VPS33A-201ENST00000267199 SEC24BO95487 1268 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms