RNA–Protein interactions for RNA: ENST00000266735.9

SNRPF-201, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPF, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-201ENST00000266735 ARHGEF10O15013 1369 aa22.82■■□□□ 1.24
SNRPF-201ENST00000266735 PNPLA6Q8IY17 1366 aa22.82■■□□□ 1.24
SNRPF-201ENST00000266735 SSH2Q76I76 1423 aa22.81■■□□□ 1.24
SNRPF-201ENST00000266735 CCDC7Q96M83 1385 aa22.8■■□□□ 1.24
SNRPF-201ENST00000266735 WASHC2AQ641Q2 1341 aa22.8■■□□□ 1.24
SNRPF-201ENST00000266735 LMOD2Q6P5Q4 547 aa22.79■■□□□ 1.24
SNRPF-201ENST00000266735 SPATA31A6Q5VVP1 1343 aa22.79■■□□□ 1.24
SNRPF-201ENST00000266735 EDC4Q6P2E9 1401 aaKnown RBP22.78■■□□□ 1.24
SNRPF-201ENST00000266735 TTC21BQ7Z4L5 1316 aa22.78■■□□□ 1.24
SNRPF-201ENST00000266735 TTC21AQ8NDW8 1320 aa22.78■■□□□ 1.24
SNRPF-201ENST00000266735 TRPM3Q9HCF6 1732 aaPredicted RBP22.78■■□□□ 1.24
SNRPF-201ENST00000266735 ABTB2Q8N961 1025 aa22.76■■□□□ 1.23
SNRPF-201ENST00000266735 SHPRHQ149N8 1683 aa22.75■■□□□ 1.23
SNRPF-201ENST00000266735 MYOM1P52179 1685 aa22.74■■□□□ 1.23
SNRPF-201ENST00000266735 AKAP12Q02952 1782 aa22.74■■□□□ 1.23
SNRPF-201ENST00000266735 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.73■■□□□ 1.23
SNRPF-201ENST00000266735 PANK3Q9H999 370 aa22.73■■□□□ 1.23
SNRPF-201ENST00000266735 NRKQ7Z2Y5 1582 aa22.72■■□□□ 1.23
SNRPF-201ENST00000266735 MON2Q7Z3U7 1717 aa22.72■■□□□ 1.23
SNRPF-201ENST00000266735 NLRP13Q86W25 1043 aa22.72■■□□□ 1.23
SNRPF-201ENST00000266735 COL22A1Q8NFW1 1626 aaPredicted RBP22.71■■□□□ 1.23
SNRPF-201ENST00000266735 ALS2Q96Q42 1657 aa22.71■■□□□ 1.23
SNRPF-201ENST00000266735 CARD14Q9BXL6 1004 aa22.71■■□□□ 1.23
SNRPF-201ENST00000266735 NUTM2GQ5VZR2 741 aa22.7■■□□□ 1.22
SNRPF-201ENST00000266735 NSD3Q9BZ95 1437 aa22.7■■□□□ 1.22
SNRPF-201ENST00000266735 NUTM2BA6NNL0 878 aaPredicted RBP22.69■■□□□ 1.22
SNRPF-201ENST00000266735 NUTM2EB1AL46 878 aaPredicted RBP22.69■■□□□ 1.22
SNRPF-201ENST00000266735 NLRP6P59044 892 aa22.69■■□□□ 1.22
SNRPF-201ENST00000266735 NUTM2AQ8IVF1 878 aaPredicted RBP22.69■■□□□ 1.22
SNRPF-201ENST00000266735 MED1Q15648 1581 aaPredicted RBP22.68■■□□□ 1.22
SNRPF-201ENST00000266735 HAP1P54257 671 aaPredicted RBP22.68■■□□□ 1.22
SNRPF-201ENST00000266735 NME9Q86XW9 330 aa22.68■■□□□ 1.22
SNRPF-201ENST00000266735 USP31Q70CQ4 1352 aa22.67■■□□□ 1.22
SNRPF-201ENST00000266735 USP19O94966 1318 aa22.67■■□□□ 1.22
SNRPF-201ENST00000266735 CABLES1Q8TDN4 633 aa22.67■■□□□ 1.22
SNRPF-201ENST00000266735 PLEKHG5O94827 1062 aa22.66■■□□□ 1.22
SNRPF-201ENST00000266735 LRP6O75581 1613 aa22.65■■□□□ 1.22
SNRPF-201ENST00000266735 CGNL1Q0VF96 1302 aa22.65■■□□□ 1.22
SNRPF-201ENST00000266735 PIK3C2AO00443 1686 aa22.64■■□□□ 1.21
SNRPF-201ENST00000266735 FYB1O15117 783 aa22.63■■□□□ 1.21
SNRPF-201ENST00000266735 ADAMTS2O95450 1211 aa22.63■■□□□ 1.21
SNRPF-201ENST00000266735 MEX3CQ5U5Q3 659 aaKnown RBP22.63■■□□□ 1.21
SNRPF-201ENST00000266735 KNSTRNQ9Y448 316 aa22.63■■□□□ 1.21
SNRPF-201ENST00000266735 OVOS2A0A0J9YW53 1432 aa22.62■■□□□ 1.21
SNRPF-201ENST00000266735 OVOS2Q6IE36 1432 aa22.62■■□□□ 1.21
SNRPF-201ENST00000266735 ZNF316A6NFI3 1004 aaPredicted RBP22.62■■□□□ 1.21
SNRPF-201ENST00000266735 GCP02774 474 aa22.62■■□□□ 1.21
SNRPF-201ENST00000266735 PIAS4Q8N2W9 510 aaPredicted RBP22.62■■□□□ 1.21
SNRPF-201ENST00000266735 KCNH5Q8NCM2 988 aa22.62■■□□□ 1.21
SNRPF-201ENST00000266735 COG3Q96JB2 828 aa22.62■■□□□ 1.21
SNRPF-201ENST00000266735 ZRANB1Q9UGI0 708 aa22.62■■□□□ 1.21
SNRPF-201ENST00000266735 SLIT3O75094 1523 aa22.6■■□□□ 1.21
SNRPF-201ENST00000266735 GGNBP2Q9H3C7 697 aa22.6■■□□□ 1.21
SNRPF-201ENST00000266735 PER1O15534 1290 aaPredicted RBP22.59■■□□□ 1.21
SNRPF-201ENST00000266735 NSD2O96028 1365 aa22.57■■□□□ 1.2
SNRPF-201ENST00000266735 C8orf37Q96NL8 207 aa22.56■■□□□ 1.2
SNRPF-201ENST00000266735 PHRF1Q9P1Y6 1649 aaKnown RBP22.55■■□□□ 1.2
SNRPF-201ENST00000266735 CPDO75976 1380 aa22.55■■□□□ 1.2
SNRPF-201ENST00000266735 USP54Q70EL1 1684 aa22.55■■□□□ 1.2
SNRPF-201ENST00000266735 ZC3H6P61129 1189 aaKnown RBP22.55■■□□□ 1.2
SNRPF-201ENST00000266735 ABCA3Q99758 1704 aa22.55■■□□□ 1.2
SNRPF-201ENST00000266735 CRYBG1Q9Y4K1 1723 aa22.55■■□□□ 1.2
SNRPF-201ENST00000266735 KIAA0232Q92628 1395 aa22.54■■□□□ 1.2
SNRPF-201ENST00000266735 AMER1Q5JTC6 1135 aaPredicted RBP22.54■■□□□ 1.2
SNRPF-201ENST00000266735 PRDM11Q9NQV5 511 aa22.54■■□□□ 1.2
SNRPF-201ENST00000266735 SOX12O15370 315 aa22.53■■□□□ 1.2
SNRPF-201ENST00000266735 NGLY1Q96IV0 654 aa22.53■■□□□ 1.2
SNRPF-201ENST00000266735 DDX10Q13206 875 aaKnown RBP22.52■■□□□ 1.2
SNRPF-201ENST00000266735 POTEDQ86YR6 584 aa22.52■■□□□ 1.2
SNRPF-201ENST00000266735 FAM83GA6ND36 823 aa22.51■■□□□ 1.19
SNRPF-201ENST00000266735 NPC1L1Q9UHC9 1359 aa22.51■■□□□ 1.19
SNRPF-201ENST00000266735 NFAT5O94916 1531 aa22.51■■□□□ 1.19
SNRPF-201ENST00000266735 ARHGEF25Q86VW2 580 aa22.5■■□□□ 1.19
SNRPF-201ENST00000266735 FNBP4Q8N3X1 1017 aaPredicted RBP22.5■■□□□ 1.19
SNRPF-201ENST00000266735 MARF1Q9Y4F3 1742 aaKnown RBP22.5■■□□□ 1.19
SNRPF-201ENST00000266735 KIF20BQ96Q89 1820 aa22.49■■□□□ 1.19
SNRPF-201ENST00000266735 AFF2P51816 1311 aa22.49■■□□□ 1.19
SNRPF-201ENST00000266735 MORC1Q86VD1 984 aa22.48■■□□□ 1.19
SNRPF-201ENST00000266735 SLIT2O94813 1529 aa22.47■■□□□ 1.19
SNRPF-201ENST00000266735 ZBTB7CA1YPR0 619 aa22.47■■□□□ 1.19
SNRPF-201ENST00000266735 CHRNA2Q15822 529 aa22.47■■□□□ 1.19
SNRPF-201ENST00000266735 CC2D1BQ5T0F9 858 aaKnown RBP22.47■■□□□ 1.19
SNRPF-201ENST00000266735 AATKQ6ZMQ8 1374 aa22.47■■□□□ 1.19
SNRPF-201ENST00000266735 ZNF772Q68DY9 489 aaPredicted RBP22.46■■□□□ 1.19
SNRPF-201ENST00000266735 USP21Q9UK80 565 aa22.46■■□□□ 1.19
SNRPF-201ENST00000266735 BTG4Q9NY30 223 aa22.45■■□□□ 1.18
SNRPF-201ENST00000266735 COL14A1Q05707 1796 aaKnown RBP22.44■■□□□ 1.18
SNRPF-201ENST00000266735 MAP3K19Q56UN5 1328 aa22.43■■□□□ 1.18
SNRPF-201ENST00000266735 FBLN1P23142 703 aa22.43■■□□□ 1.18
SNRPF-201ENST00000266735 UNC5CLQ8IV45 518 aa22.43■■□□□ 1.18
SNRPF-201ENST00000266735 BCL9LQ86UU0 1499 aa22.43■■□□□ 1.18
SNRPF-201ENST00000266735 RRS1Q15050 365 aaKnown RBP22.42■■□□□ 1.18
SNRPF-201ENST00000266735 ABCC6O95255 1503 aa22.41■■□□□ 1.18
SNRPF-201ENST00000266735 ADRA2BP18089 450 aa22.41■■□□□ 1.18
SNRPF-201ENST00000266735 TNNT2P45379 298 aaPredicted RBP22.41■■□□□ 1.18
SNRPF-201ENST00000266735 RGS17Q9UGC6 210 aaPredicted RBP22.41■■□□□ 1.18
SNRPF-201ENST00000266735 RTL1A6NKG5 1358 aa22.41■■□□□ 1.18
SNRPF-201ENST00000266735 KIF24Q5T7B8 1368 aa22.41■■□□□ 1.18
SNRPF-201ENST00000266735 AMPHP49418 695 aa22.4■■□□□ 1.18
SNRPF-201ENST00000266735 IP6K1Q92551 441 aa22.39■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms