RNA–Protein interactions for RNA: ENST00000266542.8

C1RL-201, Transcript of complement C1r subcomponent like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1RL, Length 3,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1RL-201ENST00000266542 SSH1Q8WYL5 1049 aa16.41■□□□□ 0.22
C1RL-201ENST00000266542 NUCB1Q02818 461 aa16.41■□□□□ 0.22
C1RL-201ENST00000266542 EXOSC9Q06265 439 aaKnown RBP16.41■□□□□ 0.22
C1RL-201ENST00000266542 TRIM35Q9UPQ4 493 aa16.41■□□□□ 0.22
C1RL-201ENST00000266542 COL3A1P02461 1466 aaPredicted RBP16.4■□□□□ 0.22
C1RL-201ENST00000266542 PTMSP20962 102 aa16.4■□□□□ 0.22
C1RL-201ENST00000266542 TMPOP42166 694 aaKnown RBP16.4■□□□□ 0.22
C1RL-201ENST00000266542 TSR2Q969E8 191 aaKnown RBP16.39■□□□□ 0.21
C1RL-201ENST00000266542 TULP4Q9NRJ4 1543 aa16.39■□□□□ 0.21
C1RL-201ENST00000266542 SKOR2Q2VWA4 1001 aaPredicted RBP16.38■□□□□ 0.21
C1RL-201ENST00000266542 ITPRIPQ8IWB1 547 aa16.38■□□□□ 0.21
C1RL-201ENST00000266542 EVC2Q86UK5 1308 aa16.38■□□□□ 0.21
C1RL-201ENST00000266542 NOB1Q9ULX3 412 aaKnown RBP16.38■□□□□ 0.21
C1RL-201ENST00000266542 RAB3GAP1Q15042 981 aa16.38■□□□□ 0.21
C1RL-201ENST00000266542 KIF16BQ96L93 1317 aa16.37■□□□□ 0.21
C1RL-201ENST00000266542 IPO8O15397 1037 aaKnown RBP16.37■□□□□ 0.21
C1RL-201ENST00000266542 BRPF1P55201 1214 aaPredicted RBP16.37■□□□□ 0.21
C1RL-201ENST00000266542 TMEM57Q8N5G2 664 aa16.37■□□□□ 0.21
C1RL-201ENST00000266542 TNPO1Q92973 898 aaKnown RBP16.37■□□□□ 0.21
C1RL-201ENST00000266542 KIDINS220Q9ULH0 1771 aa16.37■□□□□ 0.21
C1RL-201ENST00000266542 ALDH1L2Q3SY69 923 aa16.37■□□□□ 0.21
C1RL-201ENST00000266542 BMP2KLQ5H9B9 411 aa16.37■□□□□ 0.21
C1RL-201ENST00000266542 ESPNB1AK53 854 aa16.36■□□□□ 0.21
C1RL-201ENST00000266542 GBP4Q96PP9 640 aa16.36■□□□□ 0.21
C1RL-201ENST00000266542 GLI2P10070 1586 aa16.36■□□□□ 0.21
C1RL-201ENST00000266542 MED14O60244 1454 aa16.36■□□□□ 0.21
C1RL-201ENST00000266542 ARHGEF28Q8N1W1 1705 aaKnown RBP16.35■□□□□ 0.21
C1RL-201ENST00000266542 CLEC17AQ6ZS10 378 aa16.35■□□□□ 0.21
C1RL-201ENST00000266542 NAP1L5Q96NT1 182 aaPredicted RBP16.35■□□□□ 0.21
C1RL-201ENST00000266542 KIF2CQ99661 725 aa16.35■□□□□ 0.21
C1RL-201ENST00000266542 CHD1LQ86WJ1 897 aa16.35■□□□□ 0.21
C1RL-201ENST00000266542 ARXQ96QS3 562 aa16.35■□□□□ 0.21
C1RL-201ENST00000266542 NPATQ14207 1427 aa16.35■□□□□ 0.21
C1RL-201ENST00000266542 CFAP74Q9C0B2 1584 aa16.35■□□□□ 0.21
C1RL-201ENST00000266542 RRP9O43818 475 aaKnown RBP16.34■□□□□ 0.21
C1RL-201ENST00000266542 ZNF428Q96B54 188 aa16.34■□□□□ 0.21
C1RL-201ENST00000266542 TMEM132EQ6IEE7 984 aa16.33■□□□□ 0.2
C1RL-201ENST00000266542 ARHGAP31Q2M1Z3 1444 aa16.33■□□□□ 0.2
C1RL-201ENST00000266542 REREQ9P2R6 1566 aa16.32■□□□□ 0.2
C1RL-201ENST00000266542 GAS2L3Q86XJ1 694 aa16.32■□□□□ 0.2
C1RL-201ENST00000266542 PPIP5K1Q6PFW1 1433 aa16.32■□□□□ 0.2
C1RL-201ENST00000266542 HSP90AA1P07900 732 aaKnown RBP16.32■□□□□ 0.2
C1RL-201ENST00000266542 GLIPR1L2Q4G1C9 344 aa16.32■□□□□ 0.2
C1RL-201ENST00000266542 ANKRD26Q9UPS8 1709 aa16.32■□□□□ 0.2
C1RL-201ENST00000266542 ERBB4Q15303 1308 aa16.31■□□□□ 0.2
C1RL-201ENST00000266542 GCC1Q96CN9 775 aa16.31■□□□□ 0.2
C1RL-201ENST00000266542 PNPLA6Q8IY17 1366 aa16.31■□□□□ 0.2
C1RL-201ENST00000266542 PIK3R4Q99570 1358 aa16.31■□□□□ 0.2
C1RL-201ENST00000266542 IBTKQ9P2D0 1353 aaPredicted RBP16.31■□□□□ 0.2
C1RL-201ENST00000266542 HSP90AB1P08238 724 aaKnown RBP16.3■□□□□ 0.2
C1RL-201ENST00000266542 CHMP4BQ9H444 224 aaKnown RBP16.3■□□□□ 0.2
C1RL-201ENST00000266542 LNPKQ9C0E8 428 aa16.3■□□□□ 0.2
C1RL-201ENST00000266542 PIK3C2BO00750 1634 aa16.29■□□□□ 0.2
C1RL-201ENST00000266542 A0A1W2PP64 1363 aa16.29■□□□□ 0.2
C1RL-201ENST00000266542 CDC42BPGQ6DT37 1551 aa16.29■□□□□ 0.2
C1RL-201ENST00000266542 CHGAP10645 457 aaKnown RBP16.29■□□□□ 0.2
C1RL-201ENST00000266542 ARHGAP45Q92619 1136 aa16.29■□□□□ 0.2
C1RL-201ENST00000266542 K7ELQ4 463 aaPredicted RBP16.29■□□□□ 0.2
C1RL-201ENST00000266542 RIPK4P57078 832 aa16.29■□□□□ 0.2
C1RL-201ENST00000266542 PPP1R9BQ96SB3 815 aa16.29■□□□□ 0.2
C1RL-201ENST00000266542 ZBTB7BO15156 539 aaPredicted RBP16.28■□□□□ 0.2
C1RL-201ENST00000266542 U2SURPO15042 1029 aaKnown RBP16.28■□□□□ 0.2
C1RL-201ENST00000266542 HECW2Q9P2P5 1572 aa16.28■□□□□ 0.2
C1RL-201ENST00000266542 HSP90AA2PQ14568 343 aaPredicted RBP16.27■□□□□ 0.2
C1RL-201ENST00000266542 TRIM44Q96DX7 344 aaPredicted RBP16.27■□□□□ 0.2
C1RL-201ENST00000266542 NEXMIFQ5QGS0 1516 aa16.27■□□□□ 0.2
C1RL-201ENST00000266542 VGFO15240 615 aaPredicted RBP16.27■□□□□ 0.19
C1RL-201ENST00000266542 CABP2Q9NPB3 220 aa16.26■□□□□ 0.19
C1RL-201ENST00000266542 PTCH1Q13635 1447 aa16.26■□□□□ 0.19
C1RL-201ENST00000266542 CCDC173Q0VFZ6 552 aa16.26■□□□□ 0.19
C1RL-201ENST00000266542 ZFYVE9O95405 1425 aa16.26■□□□□ 0.19
C1RL-201ENST00000266542 CAMSAP1Q5T5Y3 1602 aa16.26■□□□□ 0.19
C1RL-201ENST00000266542 FRMPD1Q5SYB0 1578 aa16.25■□□□□ 0.19
C1RL-201ENST00000266542 FYB1O15117 783 aa16.25■□□□□ 0.19
C1RL-201ENST00000266542 CD2BP2O95400 341 aaKnown RBP16.25■□□□□ 0.19
C1RL-201ENST00000266542 FCHSD2O94868 740 aa16.25■□□□□ 0.19
C1RL-201ENST00000266542 TPM2P07951 284 aa16.25■□□□□ 0.19
C1RL-201ENST00000266542 TBC1D9Q6ZT07 1266 aa16.25■□□□□ 0.19
C1RL-201ENST00000266542 ABCC3O15438 1527 aa16.24■□□□□ 0.19
C1RL-201ENST00000266542 CD163L1Q9NR16 1453 aa16.24■□□□□ 0.19
C1RL-201ENST00000266542 DIAPH1O60610 1272 aaKnown RBP16.24■□□□□ 0.19
C1RL-201ENST00000266542 KLHL40Q2TBA0 621 aa16.24■□□□□ 0.19
C1RL-201ENST00000266542 ATAD2Q6PL18 1390 aa16.24■□□□□ 0.19
C1RL-201ENST00000266542 CLTCQ00610 1675 aaKnown RBP16.24■□□□□ 0.19
C1RL-201ENST00000266542 GGNBP2Q9H3C7 697 aa16.23■□□□□ 0.19
C1RL-201ENST00000266542 MLH3Q9UHC1 1453 aa16.23■□□□□ 0.19
C1RL-201ENST00000266542 ANKRD45Q5TZF3 282 aa16.23■□□□□ 0.19
C1RL-201ENST00000266542 MRPL50Q8N5N7 158 aaKnown RBP16.23■□□□□ 0.19
C1RL-201ENST00000266542 GOLGA6L22H0YM25 854 aa16.22■□□□□ 0.19
C1RL-201ENST00000266542 CFAP44Q96MT7 982 aa16.22■□□□□ 0.19
C1RL-201ENST00000266542 TERF2IPQ9NYB0 399 aa16.22■□□□□ 0.19
C1RL-201ENST00000266542 FAM135BQ49AJ0 1406 aa16.22■□□□□ 0.19
C1RL-201ENST00000266542 GAS2L2Q8NHY3 880 aa16.21■□□□□ 0.19
C1RL-201ENST00000266542 VAMP4O75379 141 aa16.21■□□□□ 0.19
C1RL-201ENST00000266542 ABCC4O15439 1325 aa16.21■□□□□ 0.19
C1RL-201ENST00000266542 SIRT2Q8IXJ6 389 aa16.21■□□□□ 0.18
C1RL-201ENST00000266542 CDC45O75419 566 aa16.2■□□□□ 0.18
C1RL-201ENST00000266542 BAG4O95429 457 aaKnown RBP16.2■□□□□ 0.18
C1RL-201ENST00000266542 SSFA2P28290 1259 aa16.2■□□□□ 0.18
C1RL-201ENST00000266542 LRRC7Q96NW7 1537 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms