RNA–Protein interactions for RNA: ENST00000265334.8

CDKL3-201, Transcript of cyclin dependent kinase like 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDKL3, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-201ENST00000265334 DMRT2Q9Y5R5 561 aa15.61■□□□□ 0.09
CDKL3-201ENST00000265334 WWC1Q8IX03 1113 aa15.6■□□□□ 0.09
CDKL3-201ENST00000265334 CABP1Q9NZU7 370 aa15.6■□□□□ 0.09
CDKL3-201ENST00000265334 CPSF1Q10570 1443 aaKnown RBP15.58■□□□□ 0.09
CDKL3-201ENST00000265334 FANCIQ9NVI1 1328 aa15.58■□□□□ 0.09
CDKL3-201ENST00000265334 CRBNQ96SW2 442 aa15.58■□□□□ 0.08
CDKL3-201ENST00000265334 GGNBP2Q9H3C7 697 aa15.58■□□□□ 0.08
CDKL3-201ENST00000265334 PPIP5K1Q6PFW1 1433 aa15.58■□□□□ 0.08
CDKL3-201ENST00000265334 NUDT16Q96DE0 195 aaKnown RBP15.58■□□□□ 0.08
CDKL3-201ENST00000265334 CCDC61Q9Y6R9 512 aa15.58■□□□□ 0.08
CDKL3-201ENST00000265334 CCDC27Q2M243 656 aa15.57■□□□□ 0.08
CDKL3-201ENST00000265334 TCP11L2Q8N4U5 519 aa15.57■□□□□ 0.08
CDKL3-201ENST00000265334 CHD2O14647 1828 aaKnown RBP15.57■□□□□ 0.08
CDKL3-201ENST00000265334 CDC42BPGQ6DT37 1551 aa15.57■□□□□ 0.08
CDKL3-201ENST00000265334 C20orf194Q5TEA3 1177 aa15.56■□□□□ 0.08
CDKL3-201ENST00000265334 TOPAZ1Q8N9V7 1692 aa15.56■□□□□ 0.08
CDKL3-201ENST00000265334 PNPLA6Q8IY17 1366 aa15.56■□□□□ 0.08
CDKL3-201ENST00000265334 MON2Q7Z3U7 1717 aa15.55■□□□□ 0.08
CDKL3-201ENST00000265334 WDR63Q8IWG1 891 aa15.55■□□□□ 0.08
CDKL3-201ENST00000265334 AKAP12Q02952 1782 aa15.55■□□□□ 0.08
CDKL3-201ENST00000265334 PRR36Q9H6K5 1346 aa15.54■□□□□ 0.08
CDKL3-201ENST00000265334 NPHP4O75161 1426 aaPredicted RBP15.54■□□□□ 0.08
CDKL3-201ENST00000265334 EDC4Q6P2E9 1401 aaKnown RBP15.54■□□□□ 0.08
CDKL3-201ENST00000265334 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.54■□□□□ 0.08
CDKL3-201ENST00000265334 ITSN1Q15811 1721 aa15.53■□□□□ 0.08
CDKL3-201ENST00000265334 KCNA6P17658 529 aa15.52■□□□□ 0.08
CDKL3-201ENST00000265334 U2AF1L5P0DN76 240 aaPredicted RBP15.52■□□□□ 0.07
CDKL3-201ENST00000265334 U2AF1Q01081 240 aaKnown RBP eCLIP15.52■□□□□ 0.07
CDKL3-201ENST00000265334 PLEKHF1Q96S99 279 aa15.52■□□□□ 0.07
CDKL3-201ENST00000265334 PLEKHG3A1L390 1219 aa15.51■□□□□ 0.07
CDKL3-201ENST00000265334 ZNF692Q9BU19 519 aaPredicted RBP15.51■□□□□ 0.07
CDKL3-201ENST00000265334 RRP7AQ9Y3A4 280 aaKnown RBP15.51■□□□□ 0.07
CDKL3-201ENST00000265334 MAP2P11137 1827 aaKnown RBP15.51■□□□□ 0.07
CDKL3-201ENST00000265334 BCAR3O75815 825 aa15.49■□□□□ 0.07
CDKL3-201ENST00000265334 NEUROD2Q15784 382 aa15.49■□□□□ 0.07
CDKL3-201ENST00000265334 NCKAP5LQ9HCH0 1330 aa15.48■□□□□ 0.07
CDKL3-201ENST00000265334 ANKARQ7Z5J8 1434 aa15.48■□□□□ 0.07
CDKL3-201ENST00000265334 TCERG1O14776 1098 aaKnown RBP15.48■□□□□ 0.07
CDKL3-201ENST00000265334 KDM2BQ8NHM5 1336 aa15.48■□□□□ 0.07
CDKL3-201ENST00000265334 NWD1Q149M9 1564 aa15.47■□□□□ 0.07
CDKL3-201ENST00000265334 NRKQ7Z2Y5 1582 aa15.47■□□□□ 0.07
CDKL3-201ENST00000265334 FMN2Q9NZ56 1722 aa15.47■□□□□ 0.07
CDKL3-201ENST00000265334 MSH5O43196 834 aa15.46■□□□□ 0.07
CDKL3-201ENST00000265334 POLKQ9UBT6 870 aa15.46■□□□□ 0.07
CDKL3-201ENST00000265334 DIAPH1O60610 1272 aaKnown RBP15.46■□□□□ 0.06
CDKL3-201ENST00000265334 PDE3AQ14432 1141 aa15.46■□□□□ 0.06
CDKL3-201ENST00000265334 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.46■□□□□ 0.06
CDKL3-201ENST00000265334 NALCNQ8IZF0 1738 aa15.46■□□□□ 0.06
CDKL3-201ENST00000265334 TMPOP42166 694 aaKnown RBP15.45■□□□□ 0.06
CDKL3-201ENST00000265334 AATKQ6ZMQ8 1374 aa15.44■□□□□ 0.06
CDKL3-201ENST00000265334 ACEP12821 1306 aa15.44■□□□□ 0.06
CDKL3-201ENST00000265334 U2SURPO15042 1029 aaKnown RBP15.44■□□□□ 0.06
CDKL3-201ENST00000265334 MS4A1P11836 297 aa15.44■□□□□ 0.06
CDKL3-201ENST00000265334 USP6P35125 1406 aa15.44■□□□□ 0.06
CDKL3-201ENST00000265334 RARSP54136 660 aaKnown RBP15.44■□□□□ 0.06
CDKL3-201ENST00000265334 TRIM35Q9UPQ4 493 aa15.44■□□□□ 0.06
CDKL3-201ENST00000265334 SSH2Q76I76 1423 aa15.43■□□□□ 0.06
CDKL3-201ENST00000265334 RGPD8O14715 1765 aaPredicted RBP15.43■□□□□ 0.06
CDKL3-201ENST00000265334 MYH16Q9H6N6 1097 aa15.43■□□□□ 0.06
CDKL3-201ENST00000265334 ADGRL3Q9HAR2 1447 aa15.43■□□□□ 0.06
CDKL3-201ENST00000265334 LRRC7Q96NW7 1537 aa15.42■□□□□ 0.06
CDKL3-201ENST00000265334 FCHSD2O94868 740 aa15.42■□□□□ 0.06
CDKL3-201ENST00000265334 CENPQQ7L2Z9 268 aaPredicted RBP15.42■□□□□ 0.06
CDKL3-201ENST00000265334 NME9Q86XW9 330 aa15.42■□□□□ 0.06
CDKL3-201ENST00000265334 PNNQ9H307 717 aaKnown RBP15.42■□□□□ 0.06
CDKL3-201ENST00000265334 CDK12Q9NYV4 1490 aaPredicted RBP15.42■□□□□ 0.06
CDKL3-201ENST00000265334 IL16Q14005 1332 aa15.42■□□□□ 0.06
CDKL3-201ENST00000265334 KDM4FA0A1W2PPD8 638 aa15.41■□□□□ 0.06
CDKL3-201ENST00000265334 TTC21BQ7Z4L5 1316 aa15.41■□□□□ 0.06
CDKL3-201ENST00000265334 NUTM2FA1L443 756 aa15.41■□□□□ 0.06
CDKL3-201ENST00000265334 FBLN1P23142 703 aa15.4■□□□□ 0.06
CDKL3-201ENST00000265334 MAPK8IP3Q9UPT6 1336 aa15.4■□□□□ 0.06
CDKL3-201ENST00000265334 CT47B1P0C2W7 299 aaPredicted RBP15.4■□□□□ 0.06
CDKL3-201ENST00000265334 COG3Q96JB2 828 aa15.4■□□□□ 0.06
CDKL3-201ENST00000265334 RSPH6AQ9H0K4 717 aa15.4■□□□□ 0.06
CDKL3-201ENST00000265334 TTC21AQ8NDW8 1320 aa15.39■□□□□ 0.05
CDKL3-201ENST00000265334 ANP32EQ9BTT0 268 aa15.39■□□□□ 0.05
CDKL3-201ENST00000265334 ZRANB1Q9UGI0 708 aa15.39■□□□□ 0.05
CDKL3-201ENST00000265334 OVOS2A0A0J9YW53 1432 aa15.38■□□□□ 0.05
CDKL3-201ENST00000265334 OVOS2Q6IE36 1432 aa15.38■□□□□ 0.05
CDKL3-201ENST00000265334 EMILIN1Q9Y6C2 1016 aa15.38■□□□□ 0.05
CDKL3-201ENST00000265334 IL13P35225 146 aa15.37■□□□□ 0.05
CDKL3-201ENST00000265334 PDE4AP27815 886 aa15.37■□□□□ 0.05
CDKL3-201ENST00000265334 RIPK4P57078 832 aa15.37■□□□□ 0.05
CDKL3-201ENST00000265334 BACH2Q9BYV9 841 aa15.37■□□□□ 0.05
CDKL3-201ENST00000265334 NGDNQ8NEJ9 315 aaKnown RBP15.36■□□□□ 0.05
CDKL3-201ENST00000265334 PMFBP1Q8TBY8 1022 aa15.36■□□□□ 0.05
CDKL3-201ENST00000265334 LMTK3Q96Q04 1460 aa15.36■□□□□ 0.05
CDKL3-201ENST00000265334 AAMPQ13685 434 aa15.35■□□□□ 0.05
CDKL3-201ENST00000265334 PANK1Q8TE04 598 aa15.35■□□□□ 0.05
CDKL3-201ENST00000265334 USP31Q70CQ4 1352 aa15.35■□□□□ 0.05
CDKL3-201ENST00000265334 PRKAR2BP31323 418 aa15.34■□□□□ 0.05
CDKL3-201ENST00000265334 TSR2Q969E8 191 aaKnown RBP15.34■□□□□ 0.05
CDKL3-201ENST00000265334 USP54Q70EL1 1684 aa15.34■□□□□ 0.05
CDKL3-201ENST00000265334 PPM1GO15355 546 aaPredicted RBP15.34■□□□□ 0.05
CDKL3-201ENST00000265334 SKAP1Q86WV1 359 aa15.34■□□□□ 0.05
CDKL3-201ENST00000265334 COG6Q9Y2V7 657 aa15.34■□□□□ 0.05
CDKL3-201ENST00000265334 NCOA3Q9Y6Q9 1424 aa15.33■□□□□ 0.04
CDKL3-201ENST00000265334 DLG5Q8TDM6 1919 aa15.33■□□□□ 0.04
CDKL3-201ENST00000265334 CANXP27824 592 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms