RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 NPATQ14207 1427 aa15.54■□□□□ 0.08
CHMP3-201ENST00000263856 EFCAB6Q5THR3 1501 aa15.54■□□□□ 0.08
CHMP3-201ENST00000263856 RBM42Q9BTD8 480 aaKnown RBP15.53■□□□□ 0.08
CHMP3-201ENST00000263856 CD109Q6YHK3 1445 aa15.53■□□□□ 0.08
CHMP3-201ENST00000263856 FYB1O15117 783 aa15.52■□□□□ 0.08
CHMP3-201ENST00000263856 HDAC1Q13547 482 aaPredicted RBP15.52■□□□□ 0.08
CHMP3-201ENST00000263856 PNNQ9H307 717 aaKnown RBP15.52■□□□□ 0.08
CHMP3-201ENST00000263856 TERF2IPQ9NYB0 399 aa15.52■□□□□ 0.08
CHMP3-201ENST00000263856 CHD1LQ86WJ1 897 aa15.52■□□□□ 0.07
CHMP3-201ENST00000263856 INO80Q9ULG1 1556 aaPredicted RBP15.51■□□□□ 0.07
CHMP3-201ENST00000263856 PLEKHF1Q96S99 279 aa15.51■□□□□ 0.07
CHMP3-201ENST00000263856 KIF16BQ96L93 1317 aa15.51■□□□□ 0.07
CHMP3-201ENST00000263856 ZBTB40Q9NUA8 1239 aa15.51■□□□□ 0.07
CHMP3-201ENST00000263856 CABP1Q9NZU7 370 aa15.51■□□□□ 0.07
CHMP3-201ENST00000263856 MROH1Q8NDA8 1641 aa15.51■□□□□ 0.07
CHMP3-201ENST00000263856 IDI1Q13907 227 aa15.5■□□□□ 0.07
CHMP3-201ENST00000263856 HDGFL2Q7Z4V5 671 aaPredicted RBP15.5■□□□□ 0.07
CHMP3-201ENST00000263856 SMC5Q8IY18 1101 aa15.5■□□□□ 0.07
CHMP3-201ENST00000263856 TNPO1Q92973 898 aaKnown RBP15.5■□□□□ 0.07
CHMP3-201ENST00000263856 TRIM44Q96DX7 344 aaPredicted RBP15.5■□□□□ 0.07
CHMP3-201ENST00000263856 ASXL2Q76L83 1435 aa15.49■□□□□ 0.07
CHMP3-201ENST00000263856 NCLP19338 710 aaKnown RBP15.49■□□□□ 0.07
CHMP3-201ENST00000263856 DDX11L8A8MPP1 907 aa15.49■□□□□ 0.07
CHMP3-201ENST00000263856 TSPYL6Q8N831 410 aa15.49■□□□□ 0.07
CHMP3-201ENST00000263856 VWDEQ8N2E2 1590 aa15.49■□□□□ 0.07
CHMP3-201ENST00000263856 GRPEL1Q9HAV7 217 aa15.48■□□□□ 0.07
CHMP3-201ENST00000263856 UHRF1BP1LA0JNW5 1464 aa15.48■□□□□ 0.07
CHMP3-201ENST00000263856 CD2BP2O95400 341 aaKnown RBP15.48■□□□□ 0.07
CHMP3-201ENST00000263856 NUCB1Q02818 461 aa15.48■□□□□ 0.07
CHMP3-201ENST00000263856 ADGRB3O60242 1522 aa15.47■□□□□ 0.07
CHMP3-201ENST00000263856 CT47B1P0C2W7 299 aaPredicted RBP15.47■□□□□ 0.07
CHMP3-201ENST00000263856 TULP4Q9NRJ4 1543 aa15.47■□□□□ 0.07
CHMP3-201ENST00000263856 PHACTR3Q96KR7 559 aa15.46■□□□□ 0.07
CHMP3-201ENST00000263856 DCTN1Q14203 1278 aa15.46■□□□□ 0.07
CHMP3-201ENST00000263856 GBP4Q96PP9 640 aa15.46■□□□□ 0.07
CHMP3-201ENST00000263856 CDK19Q9BWU1 502 aa15.46■□□□□ 0.07
CHMP3-201ENST00000263856 ATAD2Q6PL18 1390 aa15.46■□□□□ 0.06
CHMP3-201ENST00000263856 MRE11P49959 708 aa15.46■□□□□ 0.06
CHMP3-201ENST00000263856 IFT172Q9UG01 1749 aa15.45■□□□□ 0.06
CHMP3-201ENST00000263856 GLI2P10070 1586 aa15.45■□□□□ 0.06
CHMP3-201ENST00000263856 EMILIN1Q9Y6C2 1016 aa15.45■□□□□ 0.06
CHMP3-201ENST00000263856 ADGRB1O14514 1584 aa15.45■□□□□ 0.06
CHMP3-201ENST00000263856 KIDINS220Q9ULH0 1771 aa15.45■□□□□ 0.06
CHMP3-201ENST00000263856 NSD2O96028 1365 aa15.45■□□□□ 0.06
CHMP3-201ENST00000263856 MYO3AQ8NEV4 1616 aa15.45■□□□□ 0.06
CHMP3-201ENST00000263856 SOX12O15370 315 aa15.44■□□□□ 0.06
CHMP3-201ENST00000263856 TBC1D9Q6ZT07 1266 aa15.44■□□□□ 0.06
CHMP3-201ENST00000263856 NRXN1Q9ULB1 1477 aa15.44■□□□□ 0.06
CHMP3-201ENST00000263856 ABCC11Q96J66 1382 aa15.44■□□□□ 0.06
CHMP3-201ENST00000263856 RPGRIP1LQ68CZ1 1315 aa15.44■□□□□ 0.06
CHMP3-201ENST00000263856 FSD2A1L4K1 749 aa15.44■□□□□ 0.06
CHMP3-201ENST00000263856 FAM83GA6ND36 823 aa15.44■□□□□ 0.06
CHMP3-201ENST00000263856 WAPLQ7Z5K2 1190 aa15.44■□□□□ 0.06
CHMP3-201ENST00000263856 SSFA2P28290 1259 aa15.44■□□□□ 0.06
CHMP3-201ENST00000263856 ABCA9Q8IUA7 1624 aa15.44■□□□□ 0.06
CHMP3-201ENST00000263856 ZRANB1Q9UGI0 708 aa15.43■□□□□ 0.06
CHMP3-201ENST00000263856 SETBP1Q9Y6X0 1596 aa15.42■□□□□ 0.06
CHMP3-201ENST00000263856 PPLO60437 1756 aa15.42■□□□□ 0.06
CHMP3-201ENST00000263856 FOXD4L5Q5VV16 416 aaPredicted RBP15.42■□□□□ 0.06
CHMP3-201ENST00000263856 GAS2L3Q86XJ1 694 aa15.42■□□□□ 0.06
CHMP3-201ENST00000263856 FOXD4L4Q8WXT5 416 aaPredicted RBP15.42■□□□□ 0.06
CHMP3-201ENST00000263856 FBXO31Q5XUX0 539 aaPredicted RBP15.42■□□□□ 0.06
CHMP3-201ENST00000263856 ZNF692Q9BU19 519 aaPredicted RBP15.42■□□□□ 0.06
CHMP3-201ENST00000263856 RRS1Q15050 365 aaKnown RBP15.41■□□□□ 0.06
CHMP3-201ENST00000263856 TWISTNBQ3B726 338 aaPredicted RBP15.41■□□□□ 0.06
CHMP3-201ENST00000263856 GAS2L2Q8NHY3 880 aa15.41■□□□□ 0.06
CHMP3-201ENST00000263856 DDX49Q9Y6V7 483 aaKnown RBP15.41■□□□□ 0.06
CHMP3-201ENST00000263856 RBM25P49756 843 aaKnown RBP15.4■□□□□ 0.06
CHMP3-201ENST00000263856 ARAP3Q8WWN8 1544 aa15.4■□□□□ 0.06
CHMP3-201ENST00000263856 ZMYM3Q14202 1370 aa15.4■□□□□ 0.06
CHMP3-201ENST00000263856 K7ELQ4 463 aaPredicted RBP15.4■□□□□ 0.06
CHMP3-201ENST00000263856 ZBTB7BO15156 539 aaPredicted RBP15.4■□□□□ 0.06
CHMP3-201ENST00000263856 BMP2KLQ5H9B9 411 aa15.4■□□□□ 0.06
CHMP3-201ENST00000263856 C16orf71Q8IYS4 520 aaPredicted RBP15.4■□□□□ 0.06
CHMP3-201ENST00000263856 MBIPQ9NS73 344 aa15.4■□□□□ 0.06
CHMP3-201ENST00000263856 ZC3H13Q5T200 1668 aaKnown RBP15.4■□□□□ 0.06
CHMP3-201ENST00000263856 NUTM2FA1L443 756 aa15.4■□□□□ 0.06
CHMP3-201ENST00000263856 GOLGA6L22H0YM25 854 aa15.4■□□□□ 0.06
CHMP3-201ENST00000263856 VAMP4O75379 141 aa15.39■□□□□ 0.05
CHMP3-201ENST00000263856 FCHSD2O94868 740 aa15.39■□□□□ 0.05
CHMP3-201ENST00000263856 ALDH1L2Q3SY69 923 aa15.39■□□□□ 0.05
CHMP3-201ENST00000263856 AK9Q5TCS8 1911 aa15.39■□□□□ 0.05
CHMP3-201ENST00000263856 CAMSAP1Q5T5Y3 1602 aa15.39■□□□□ 0.05
CHMP3-201ENST00000263856 PPIP5K1Q6PFW1 1433 aa15.39■□□□□ 0.05
CHMP3-201ENST00000263856 MLECQ14165 292 aa15.39■□□□□ 0.05
CHMP3-201ENST00000263856 KRT24Q2M2I5 525 aa15.39■□□□□ 0.05
CHMP3-201ENST00000263856 POLKQ9UBT6 870 aa15.39■□□□□ 0.05
CHMP3-201ENST00000263856 TPRNQ4KMQ1 711 aa15.38■□□□□ 0.05
CHMP3-201ENST00000263856 MCTP1Q6DN14 999 aa15.38■□□□□ 0.05
CHMP3-201ENST00000263856 NME9Q86XW9 330 aa15.38■□□□□ 0.05
CHMP3-201ENST00000263856 MRPL50Q8N5N7 158 aaKnown RBP15.38■□□□□ 0.05
CHMP3-201ENST00000263856 C8orf58Q8NAV2 365 aa15.38■□□□□ 0.05
CHMP3-201ENST00000263856 IL16Q14005 1332 aa15.38■□□□□ 0.05
CHMP3-201ENST00000263856 ESPNB1AK53 854 aa15.38■□□□□ 0.05
CHMP3-201ENST00000263856 SMARCA5O60264 1052 aaPredicted RBP15.38■□□□□ 0.05
CHMP3-201ENST00000263856 NFE2L2Q16236 605 aa15.38■□□□□ 0.05
CHMP3-201ENST00000263856 GCC1Q96CN9 775 aa15.38■□□□□ 0.05
CHMP3-201ENST00000263856 NCKAP5LQ9HCH0 1330 aa15.38■□□□□ 0.05
CHMP3-201ENST00000263856 SIRT2Q8IXJ6 389 aa15.37■□□□□ 0.05
CHMP3-201ENST00000263856 ADGRB2O60241 1585 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms