RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 RBM33Q96EV2 1170 aaKnown RBP17.75■□□□□ 0.43
VMP1-201ENST00000262291 EMILIN1Q9Y6C2 1016 aa17.75■□□□□ 0.43
VMP1-201ENST00000262291 THEMISQ8N1K5 641 aaPredicted RBP17.75■□□□□ 0.43
VMP1-201ENST00000262291 E9PSI1 815 aa17.74■□□□□ 0.43
VMP1-201ENST00000262291 SOX12O15370 315 aa17.74■□□□□ 0.43
VMP1-201ENST00000262291 TRMT2AQ8IZ69 625 aaKnown RBP17.74■□□□□ 0.43
VMP1-201ENST00000262291 POLKQ9UBT6 870 aa17.74■□□□□ 0.43
VMP1-201ENST00000262291 FAM135BQ49AJ0 1406 aa17.73■□□□□ 0.43
VMP1-201ENST00000262291 RRS1Q15050 365 aaKnown RBP17.73■□□□□ 0.43
VMP1-201ENST00000262291 TECPR2O15040 1411 aa17.73■□□□□ 0.43
VMP1-201ENST00000262291 PMFBP1Q8TBY8 1022 aa17.73■□□□□ 0.43
VMP1-201ENST00000262291 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.72■□□□□ 0.43
VMP1-201ENST00000262291 DIAPH1O60610 1272 aaKnown RBP17.72■□□□□ 0.43
VMP1-201ENST00000262291 SKAP1Q86WV1 359 aa17.72■□□□□ 0.43
VMP1-201ENST00000262291 CPS1P31327 1500 aa17.72■□□□□ 0.43
VMP1-201ENST00000262291 ATP7BP35670 1465 aa17.71■□□□□ 0.43
VMP1-201ENST00000262291 KIF20BQ96Q89 1820 aa17.71■□□□□ 0.43
VMP1-201ENST00000262291 HMOX1P09601 288 aa17.71■□□□□ 0.43
VMP1-201ENST00000262291 CPSF1Q10570 1443 aaKnown RBP17.7■□□□□ 0.42
VMP1-201ENST00000262291 SIRT1Q96EB6 747 aa17.7■□□□□ 0.42
VMP1-201ENST00000262291 BCL2L13Q9BXK5 485 aa17.7■□□□□ 0.42
VMP1-201ENST00000262291 COL3A1P02461 1466 aaPredicted RBP17.69■□□□□ 0.42
VMP1-201ENST00000262291 NKTRP30414 1462 aaKnown RBP17.69■□□□□ 0.42
VMP1-201ENST00000262291 IQSEC2Q5JU85 1478 aa17.69■□□□□ 0.42
VMP1-201ENST00000262291 ACEP12821 1306 aa17.69■□□□□ 0.42
VMP1-201ENST00000262291 RIMS1Q86UR5 1692 aaKnown RBP17.69■□□□□ 0.42
VMP1-201ENST00000262291 KNDC1Q76NI1 1749 aa17.69■□□□□ 0.42
VMP1-201ENST00000262291 ANKRD26Q9UPS8 1709 aa17.68■□□□□ 0.42
VMP1-201ENST00000262291 KCNA6P17658 529 aa17.68■□□□□ 0.42
VMP1-201ENST00000262291 COG3Q96JB2 828 aa17.68■□□□□ 0.42
VMP1-201ENST00000262291 PLEKHF1Q96S99 279 aa17.68■□□□□ 0.42
VMP1-201ENST00000262291 EDC4Q6P2E9 1401 aaKnown RBP17.68■□□□□ 0.42
VMP1-201ENST00000262291 TSR2Q969E8 191 aaKnown RBP17.68■□□□□ 0.42
VMP1-201ENST00000262291 TBX22Q9Y458 520 aa17.68■□□□□ 0.42
VMP1-201ENST00000262291 MAPK8IP3Q9UPT6 1336 aa17.68■□□□□ 0.42
VMP1-201ENST00000262291 MED14O60244 1454 aa17.67■□□□□ 0.42
VMP1-201ENST00000262291 ARHGAP23Q9P227 1491 aa17.67■□□□□ 0.42
VMP1-201ENST00000262291 SLIT1O75093 1534 aa17.67■□□□□ 0.42
VMP1-201ENST00000262291 TMPOP42166 694 aaKnown RBP17.66■□□□□ 0.42
VMP1-201ENST00000262291 FRAT1Q92837 279 aaPredicted RBP17.66■□□□□ 0.42
VMP1-201ENST00000262291 CDC42BPGQ6DT37 1551 aa17.65■□□□□ 0.42
VMP1-201ENST00000262291 RTN4Q9NQC3 1192 aaKnown RBP17.65■□□□□ 0.42
VMP1-201ENST00000262291 PRKAR2BP31323 418 aa17.65■□□□□ 0.42
VMP1-201ENST00000262291 MAP2P11137 1827 aaKnown RBP17.65■□□□□ 0.42
VMP1-201ENST00000262291 PHF23Q9BUL5 403 aaPredicted RBP17.64■□□□□ 0.42
VMP1-201ENST00000262291 RIPK4P57078 832 aa17.64■□□□□ 0.41
VMP1-201ENST00000262291 TRIM35Q9UPQ4 493 aa17.63■□□□□ 0.41
VMP1-201ENST00000262291 TNNQ9UQP3 1299 aa17.63■□□□□ 0.41
VMP1-201ENST00000262291 TTC21BQ7Z4L5 1316 aa17.63■□□□□ 0.41
VMP1-201ENST00000262291 CANXP27824 592 aaKnown RBP17.63■□□□□ 0.41
VMP1-201ENST00000262291 PHACTR3Q96KR7 559 aa17.63■□□□□ 0.41
VMP1-201ENST00000262291 NGEFQ8N5V2 710 aa17.63■□□□□ 0.41
VMP1-201ENST00000262291 PNPLA6Q8IY17 1366 aa17.62■□□□□ 0.41
VMP1-201ENST00000262291 NUTM2GQ5VZR2 741 aa17.62■□□□□ 0.41
VMP1-201ENST00000262291 WDR63Q8IWG1 891 aa17.62■□□□□ 0.41
VMP1-201ENST00000262291 NGDNQ8NEJ9 315 aaKnown RBP17.62■□□□□ 0.41
VMP1-201ENST00000262291 PANK1Q8TE04 598 aa17.62■□□□□ 0.41
VMP1-201ENST00000262291 THUMPD2Q9BTF0 503 aaKnown RBP17.62■□□□□ 0.41
VMP1-201ENST00000262291 ZNF692Q9BU19 519 aaPredicted RBP17.62■□□□□ 0.41
VMP1-201ENST00000262291 CEP170BQ9Y4F5 1589 aaPredicted RBP17.61■□□□□ 0.41
VMP1-201ENST00000262291 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.61■□□□□ 0.41
VMP1-201ENST00000262291 PAK3O75914 559 aaPredicted RBP17.61■□□□□ 0.41
VMP1-201ENST00000262291 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.61■□□□□ 0.41
VMP1-201ENST00000262291 LAS1LQ9Y4W2 734 aaKnown RBP17.6■□□□□ 0.41
VMP1-201ENST00000262291 ITSN1Q15811 1721 aa17.6■□□□□ 0.41
VMP1-201ENST00000262291 RSPH6AQ9H0K4 717 aa17.6■□□□□ 0.41
VMP1-201ENST00000262291 DNAJC5Q9H3Z4 198 aa17.6■□□□□ 0.41
VMP1-201ENST00000262291 IL13P35225 146 aa17.59■□□□□ 0.41
VMP1-201ENST00000262291 ANKLE2Q86XL3 938 aa17.59■□□□□ 0.41
VMP1-201ENST00000262291 IL27Q8NEV9 243 aa17.59■□□□□ 0.41
VMP1-201ENST00000262291 PLEKHG3A1L390 1219 aa17.59■□□□□ 0.41
VMP1-201ENST00000262291 CCDC27Q2M243 656 aa17.59■□□□□ 0.41
VMP1-201ENST00000262291 MON2Q7Z3U7 1717 aa17.59■□□□□ 0.41
VMP1-201ENST00000262291 PLEKHG5O94827 1062 aa17.58■□□□□ 0.41
VMP1-201ENST00000262291 RARSP54136 660 aaKnown RBP17.58■□□□□ 0.41
VMP1-201ENST00000262291 RGPD8O14715 1765 aaPredicted RBP17.58■□□□□ 0.4
VMP1-201ENST00000262291 EXOSC9Q06265 439 aaKnown RBP17.58■□□□□ 0.4
VMP1-201ENST00000262291 CLUAP1Q96AJ1 413 aa17.58■□□□□ 0.4
VMP1-201ENST00000262291 COG6Q9Y2V7 657 aa17.58■□□□□ 0.4
VMP1-201ENST00000262291 AKAP12Q02952 1782 aa17.58■□□□□ 0.4
VMP1-201ENST00000262291 LRRC7Q96NW7 1537 aa17.57■□□□□ 0.4
VMP1-201ENST00000262291 MYH16Q9H6N6 1097 aa17.57■□□□□ 0.4
VMP1-201ENST00000262291 ADGRB2O60241 1585 aa17.57■□□□□ 0.4
VMP1-201ENST00000262291 FCHSD2O94868 740 aa17.56■□□□□ 0.4
VMP1-201ENST00000262291 AEBP1Q8IUX7 1158 aa17.56■□□□□ 0.4
VMP1-201ENST00000262291 USP6P35125 1406 aa17.56■□□□□ 0.4
VMP1-201ENST00000262291 HSP90AB2PQ58FF8 381 aa17.56■□□□□ 0.4
VMP1-201ENST00000262291 NOP58Q9Y2X3 529 aaKnown RBP17.56■□□□□ 0.4
VMP1-201ENST00000262291 DIP2AQ14689 1571 aa17.55■□□□□ 0.4
VMP1-201ENST00000262291 C14orf37Q86TY3 774 aa17.54■□□□□ 0.4
VMP1-201ENST00000262291 PTCH1Q13635 1447 aa17.54■□□□□ 0.4
VMP1-201ENST00000262291 NEFMP07197 916 aa17.54■□□□□ 0.4
VMP1-201ENST00000262291 RLBP1P12271 317 aa17.54■□□□□ 0.4
VMP1-201ENST00000262291 FAM83GA6ND36 823 aa17.53■□□□□ 0.4
VMP1-201ENST00000262291 DCTN1Q14203 1278 aa17.53■□□□□ 0.4
VMP1-201ENST00000262291 EIF4A2Q14240 407 aaKnown RBP17.53■□□□□ 0.4
VMP1-201ENST00000262291 TOPAZ1Q8N9V7 1692 aa17.52■□□□□ 0.4
VMP1-201ENST00000262291 AATKQ6ZMQ8 1374 aa17.52■□□□□ 0.4
VMP1-201ENST00000262291 SULT6B1Q6IMI4 303 aa17.51■□□□□ 0.39
VMP1-201ENST00000262291 CDK12Q9NYV4 1490 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms