RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 ZKSCAN2Q63HK3 967 aa20.92■□□□□ 0.94
TM9SF1-201ENST00000261789 RTN4Q9NQC3 1192 aaKnown RBP20.92■□□□□ 0.94
TM9SF1-201ENST00000261789 DZIP1LQ8IYY4 767 aaKnown RBP20.91■□□□□ 0.94
TM9SF1-201ENST00000261789 SLC52A1Q9NWF4 448 aa20.9■□□□□ 0.94
TM9SF1-201ENST00000261789 RWDD1Q9H446 243 aaPredicted RBP20.9■□□□□ 0.94
TM9SF1-201ENST00000261789 SSH1Q8WYL5 1049 aa20.89■□□□□ 0.94
TM9SF1-201ENST00000261789 ADGRB2O60241 1585 aa20.89■□□□□ 0.94
TM9SF1-201ENST00000261789 TRIM27P14373 513 aa20.89■□□□□ 0.93
TM9SF1-201ENST00000261789 PTPRMP28827 1452 aa20.88■□□□□ 0.93
TM9SF1-201ENST00000261789 SLKQ9H2G2 1235 aaPredicted RBP20.88■□□□□ 0.93
TM9SF1-201ENST00000261789 TERF2IPQ9NYB0 399 aa20.88■□□□□ 0.93
TM9SF1-201ENST00000261789 NLRP1Q9C000 1473 aa20.88■□□□□ 0.93
TM9SF1-201ENST00000261789 ARHGAP31Q2M1Z3 1444 aa20.88■□□□□ 0.93
TM9SF1-201ENST00000261789 RIPK4P57078 832 aa20.87■□□□□ 0.93
TM9SF1-201ENST00000261789 CABP1Q9NZU7 370 aa20.87■□□□□ 0.93
TM9SF1-201ENST00000261789 CD163L1Q9NR16 1453 aa20.87■□□□□ 0.93
TM9SF1-201ENST00000261789 AAMPQ13685 434 aa20.86■□□□□ 0.93
TM9SF1-201ENST00000261789 ITPRIPQ8IWB1 547 aa20.86■□□□□ 0.93
TM9SF1-201ENST00000261789 CDK19Q9BWU1 502 aa20.86■□□□□ 0.93
TM9SF1-201ENST00000261789 NOB1Q9ULX3 412 aaKnown RBP20.86■□□□□ 0.93
TM9SF1-201ENST00000261789 COL3A1P02461 1466 aaPredicted RBP20.86■□□□□ 0.93
TM9SF1-201ENST00000261789 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.85■□□□□ 0.93
TM9SF1-201ENST00000261789 YTHDC2Q9H6S0 1430 aaKnown RBP20.85■□□□□ 0.93
TM9SF1-201ENST00000261789 ZFYVE9O95405 1425 aa20.84■□□□□ 0.93
TM9SF1-201ENST00000261789 DIAPH1O60610 1272 aaKnown RBP20.84■□□□□ 0.93
TM9SF1-201ENST00000261789 BRPF3Q9ULD4 1205 aa20.84■□□□□ 0.93
TM9SF1-201ENST00000261789 ATAD2Q6PL18 1390 aa20.84■□□□□ 0.93
TM9SF1-201ENST00000261789 NCBP3Q53F19 620 aaKnown RBP20.83■□□□□ 0.93
TM9SF1-201ENST00000261789 STAG3Q9UJ98 1225 aa20.83■□□□□ 0.93
TM9SF1-201ENST00000261789 TMEM131LA2VDJ0 1609 aa20.83■□□□□ 0.93
TM9SF1-201ENST00000261789 ATF7IPQ6VMQ6 1270 aa20.82■□□□□ 0.92
TM9SF1-201ENST00000261789 WAPLQ7Z5K2 1190 aa20.82■□□□□ 0.92
TM9SF1-201ENST00000261789 HDGFL2Q7Z4V5 671 aaPredicted RBP20.82■□□□□ 0.92
TM9SF1-201ENST00000261789 TBC1D32Q96NH3 1257 aa20.81■□□□□ 0.92
TM9SF1-201ENST00000261789 PREX1Q8TCU6 1659 aa20.81■□□□□ 0.92
TM9SF1-201ENST00000261789 TMEM57Q8N5G2 664 aa20.81■□□□□ 0.92
TM9SF1-201ENST00000261789 UPF2Q9HAU5 1272 aaKnown RBP20.81■□□□□ 0.92
TM9SF1-201ENST00000261789 BECN1Q14457 450 aa20.8■□□□□ 0.92
TM9SF1-201ENST00000261789 CT47B1P0C2W7 299 aaPredicted RBP20.8■□□□□ 0.92
TM9SF1-201ENST00000261789 SPRYD3Q8NCJ5 442 aa20.79■□□□□ 0.92
TM9SF1-201ENST00000261789 TBC1D2Q9BYX2 928 aa20.78■□□□□ 0.92
TM9SF1-201ENST00000261789 DDX19BQ9UMR2 479 aa20.78■□□□□ 0.92
TM9SF1-201ENST00000261789 HMOX1P09601 288 aa20.77■□□□□ 0.92
TM9SF1-201ENST00000261789 PRKAR2BP31323 418 aa20.77■□□□□ 0.92
TM9SF1-201ENST00000261789 THUMPD2Q9BTF0 503 aaKnown RBP20.77■□□□□ 0.92
TM9SF1-201ENST00000261789 REREQ9P2R6 1566 aa20.77■□□□□ 0.92
TM9SF1-201ENST00000261789 ALKQ9UM73 1620 aa20.76■□□□□ 0.91
TM9SF1-201ENST00000261789 MFAP1P55081 439 aaKnown RBP20.76■□□□□ 0.91
TM9SF1-201ENST00000261789 POLKQ9UBT6 870 aa20.76■□□□□ 0.91
TM9SF1-201ENST00000261789 PNPLA6Q8IY17 1366 aa20.75■□□□□ 0.91
TM9SF1-201ENST00000261789 PHACTR3Q96KR7 559 aa20.75■□□□□ 0.91
TM9SF1-201ENST00000261789 ARHGEF40Q8TER5 1519 aa20.75■□□□□ 0.91
TM9SF1-201ENST00000261789 IL16Q14005 1332 aa20.74■□□□□ 0.91
TM9SF1-201ENST00000261789 ANKRD26Q9UPS8 1709 aa20.74■□□□□ 0.91
TM9SF1-201ENST00000261789 HDAC1Q13547 482 aaPredicted RBP20.74■□□□□ 0.91
TM9SF1-201ENST00000261789 ANTXR1Q9H6X2 564 aa20.73■□□□□ 0.91
TM9SF1-201ENST00000261789 ZBTB40Q9NUA8 1239 aa20.73■□□□□ 0.91
TM9SF1-201ENST00000261789 RSPH6AQ9H0K4 717 aa20.73■□□□□ 0.91
TM9SF1-201ENST00000261789 MED14O60244 1454 aa20.73■□□□□ 0.91
TM9SF1-201ENST00000261789 ZRANB1Q9UGI0 708 aa20.72■□□□□ 0.91
TM9SF1-201ENST00000261789 CLTCQ00610 1675 aaKnown RBP20.72■□□□□ 0.91
TM9SF1-201ENST00000261789 FCHSD2O94868 740 aa20.72■□□□□ 0.91
TM9SF1-201ENST00000261789 EMILIN1Q9Y6C2 1016 aa20.72■□□□□ 0.91
TM9SF1-201ENST00000261789 ELL2O00472 640 aaPredicted RBP20.71■□□□□ 0.91
TM9SF1-201ENST00000261789 MLECQ14165 292 aa20.71■□□□□ 0.91
TM9SF1-201ENST00000261789 ZMYM3Q14202 1370 aa20.71■□□□□ 0.91
TM9SF1-201ENST00000261789 AGLP35573 1532 aa20.71■□□□□ 0.91
TM9SF1-201ENST00000261789 LRRC7Q96NW7 1537 aa20.71■□□□□ 0.91
TM9SF1-201ENST00000261789 SMC5Q8IY18 1101 aa20.7■□□□□ 0.9
TM9SF1-201ENST00000261789 C22orf23Q9BZE7 217 aa20.7■□□□□ 0.9
TM9SF1-201ENST00000261789 NCKAP5LQ9HCH0 1330 aa20.7■□□□□ 0.9
TM9SF1-201ENST00000261789 TSPYL6Q8N831 410 aa20.69■□□□□ 0.9
TM9SF1-201ENST00000261789 PNNQ9H307 717 aaKnown RBP20.69■□□□□ 0.9
TM9SF1-201ENST00000261789 KIF16BQ96L93 1317 aa20.69■□□□□ 0.9
TM9SF1-201ENST00000261789 LNPKQ9C0E8 428 aa20.69■□□□□ 0.9
TM9SF1-201ENST00000261789 KIF20BQ96Q89 1820 aa20.68■□□□□ 0.9
TM9SF1-201ENST00000261789 IPO8O15397 1037 aaKnown RBP20.68■□□□□ 0.9
TM9SF1-201ENST00000261789 NME9Q86XW9 330 aa20.68■□□□□ 0.9
TM9SF1-201ENST00000261789 C1orf115Q9H7X2 142 aa20.68■□□□□ 0.9
TM9SF1-201ENST00000261789 FAM135BQ49AJ0 1406 aa20.66■□□□□ 0.9
TM9SF1-201ENST00000261789 MAP2P11137 1827 aaKnown RBP20.66■□□□□ 0.9
TM9SF1-201ENST00000261789 ALDH1L2Q3SY69 923 aa20.65■□□□□ 0.9
TM9SF1-201ENST00000261789 RRS1Q15050 365 aaKnown RBP20.64■□□□□ 0.9
TM9SF1-201ENST00000261789 NFE2L2Q16236 605 aa20.64■□□□□ 0.9
TM9SF1-201ENST00000261789 TXNDC2Q86VQ3 553 aa20.64■□□□□ 0.9
TM9SF1-201ENST00000261789 VAMP4O75379 141 aa20.64■□□□□ 0.89
TM9SF1-201ENST00000261789 NUCB1Q02818 461 aa20.63■□□□□ 0.89
TM9SF1-201ENST00000261789 A2ML1A8K2U0 1454 aa20.62■□□□□ 0.89
TM9SF1-201ENST00000261789 FAM83GA6ND36 823 aa20.62■□□□□ 0.89
TM9SF1-201ENST00000261789 IL13P35225 146 aa20.62■□□□□ 0.89
TM9SF1-201ENST00000261789 MBIPQ9NS73 344 aa20.62■□□□□ 0.89
TM9SF1-201ENST00000261789 RIMS2Q9UQ26 1411 aa20.61■□□□□ 0.89
TM9SF1-201ENST00000261789 CHD1LQ86WJ1 897 aa20.61■□□□□ 0.89
TM9SF1-201ENST00000261789 MRPL50Q8N5N7 158 aaKnown RBP20.61■□□□□ 0.89
TM9SF1-201ENST00000261789 ZBTB7BO15156 539 aaPredicted RBP20.61■□□□□ 0.89
TM9SF1-201ENST00000261789 DCTN1Q14203 1278 aa20.61■□□□□ 0.89
TM9SF1-201ENST00000261789 PPIP5K1Q6PFW1 1433 aa20.6■□□□□ 0.89
TM9SF1-201ENST00000261789 WASLO00401 505 aaPredicted RBP20.6■□□□□ 0.89
TM9SF1-201ENST00000261789 ANKRD45Q5TZF3 282 aa20.6■□□□□ 0.89
TM9SF1-201ENST00000261789 METP08581 1390 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms