RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 TNS3Q68CZ2 1445 aa28.57■■■□□ 2.16
RTCA-201ENST00000260563 SBNO1A3KN83 1393 aa28.56■■■□□ 2.16
RTCA-201ENST00000260563 BRD4O60885 1362 aaPredicted RBP28.56■■■□□ 2.16
RTCA-201ENST00000260563 KIF20BQ96Q89 1820 aa28.54■■■□□ 2.16
RTCA-201ENST00000260563 EDC4Q6P2E9 1401 aaKnown RBP28.54■■■□□ 2.16
RTCA-201ENST00000260563 DDX10Q13206 875 aaKnown RBP28.53■■■□□ 2.16
RTCA-201ENST00000260563 PIK3C2AO00443 1686 aa28.53■■■□□ 2.16
RTCA-201ENST00000260563 LRRC59Q96AG4 307 aaKnown RBP28.53■■■□□ 2.16
RTCA-201ENST00000260563 PAK3O75914 559 aaPredicted RBP28.52■■■□□ 2.16
RTCA-201ENST00000260563 SSH2Q76I76 1423 aa28.52■■■□□ 2.16
RTCA-201ENST00000260563 COL22A1Q8NFW1 1626 aaPredicted RBP28.52■■■□□ 2.16
RTCA-201ENST00000260563 SPATA31A3Q5VYP0 1347 aa28.5■■■□□ 2.15
RTCA-201ENST00000260563 DIEXFQ68CQ4 756 aaKnown RBP28.5■■■□□ 2.15
RTCA-201ENST00000260563 ARHGEF10O15013 1369 aa28.48■■■□□ 2.15
RTCA-201ENST00000260563 ABCA3Q99758 1704 aa28.48■■■□□ 2.15
RTCA-201ENST00000260563 NSD3Q9BZ95 1437 aa28.48■■■□□ 2.15
RTCA-201ENST00000260563 JCADQ9P266 1359 aa28.48■■■□□ 2.15
RTCA-201ENST00000260563 TTC21BQ7Z4L5 1316 aa28.47■■■□□ 2.15
RTCA-201ENST00000260563 CRYBG1Q9Y4K1 1723 aa28.47■■■□□ 2.15
RTCA-201ENST00000260563 USP54Q70EL1 1684 aa28.47■■■□□ 2.15
RTCA-201ENST00000260563 TTC21AQ8NDW8 1320 aa28.46■■■□□ 2.15
RTCA-201ENST00000260563 PNPLA6Q8IY17 1366 aa28.46■■■□□ 2.15
RTCA-201ENST00000260563 LMOD2Q6P5Q4 547 aa28.46■■■□□ 2.15
RTCA-201ENST00000260563 PANK3Q9H999 370 aa28.46■■■□□ 2.15
RTCA-201ENST00000260563 MARF1Q9Y4F3 1742 aaKnown RBP28.46■■■□□ 2.15
RTCA-201ENST00000260563 MED1Q15648 1581 aaPredicted RBP28.45■■■□□ 2.15
RTCA-201ENST00000260563 ILDR1Q86SU0 546 aaPredicted RBP28.44■■■□□ 2.14
RTCA-201ENST00000260563 PHRF1Q9P1Y6 1649 aaKnown RBP28.44■■■□□ 2.14
RTCA-201ENST00000260563 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.43■■■□□ 2.14
RTCA-201ENST00000260563 ANKRD26Q9UPS8 1709 aa28.43■■■□□ 2.14
RTCA-201ENST00000260563 ABTB2Q8N961 1025 aa28.42■■■□□ 2.14
RTCA-201ENST00000260563 CARD14Q9BXL6 1004 aa28.41■■■□□ 2.14
RTCA-201ENST00000260563 NUTM2GQ5VZR2 741 aa28.37■■■□□ 2.13
RTCA-201ENST00000260563 NME9Q86XW9 330 aa28.36■■■□□ 2.13
RTCA-201ENST00000260563 CGNL1Q0VF96 1302 aa28.36■■■□□ 2.13
RTCA-201ENST00000260563 KNSTRNQ9Y448 316 aa28.35■■■□□ 2.13
RTCA-201ENST00000260563 SPATA31A6Q5VVP1 1343 aa28.34■■■□□ 2.13
RTCA-201ENST00000260563 NLRP6P59044 892 aa28.34■■■□□ 2.13
RTCA-201ENST00000260563 SLIT3O75094 1523 aa28.34■■■□□ 2.13
RTCA-201ENST00000260563 OVOS2A0A0J9YW53 1432 aa28.34■■■□□ 2.13
RTCA-201ENST00000260563 OVOS2Q6IE36 1432 aa28.34■■■□□ 2.13
RTCA-201ENST00000260563 USP31Q70CQ4 1352 aa28.34■■■□□ 2.13
RTCA-201ENST00000260563 NLRP13Q86W25 1043 aa28.33■■■□□ 2.13
RTCA-201ENST00000260563 PLEKHG5O94827 1062 aa28.32■■■□□ 2.12
RTCA-201ENST00000260563 USP19O94966 1318 aa28.31■■■□□ 2.12
RTCA-201ENST00000260563 NSD2O96028 1365 aa28.3■■■□□ 2.12
RTCA-201ENST00000260563 FYB1O15117 783 aa28.29■■■□□ 2.12
RTCA-201ENST00000260563 PER1O15534 1290 aaPredicted RBP28.28■■■□□ 2.12
RTCA-201ENST00000260563 HAP1P54257 671 aaPredicted RBP28.28■■■□□ 2.12
RTCA-201ENST00000260563 CABLES1Q8TDN4 633 aa28.28■■■□□ 2.12
RTCA-201ENST00000260563 GGNBP2Q9H3C7 697 aa28.28■■■□□ 2.12
RTCA-201ENST00000260563 ZRANB1Q9UGI0 708 aa28.28■■■□□ 2.12
RTCA-201ENST00000260563 LRP6O75581 1613 aa28.28■■■□□ 2.12
RTCA-201ENST00000260563 COG3Q96JB2 828 aa28.28■■■□□ 2.12
RTCA-201ENST00000260563 LTN1O94822 1766 aa28.27■■■□□ 2.12
RTCA-201ENST00000260563 NUTM2BA6NNL0 878 aaPredicted RBP28.26■■■□□ 2.11
RTCA-201ENST00000260563 NUTM2EB1AL46 878 aaPredicted RBP28.26■■■□□ 2.11
RTCA-201ENST00000260563 NUTM2AQ8IVF1 878 aaPredicted RBP28.26■■■□□ 2.11
RTCA-201ENST00000260563 NFAT5O94916 1531 aa28.25■■■□□ 2.11
RTCA-201ENST00000260563 AMER1Q5JTC6 1135 aaPredicted RBP28.23■■■□□ 2.11
RTCA-201ENST00000260563 NPC1L1Q9UHC9 1359 aa28.21■■■□□ 2.11
RTCA-201ENST00000260563 KCNH5Q8NCM2 988 aa28.21■■■□□ 2.11
RTCA-201ENST00000260563 GCP02774 474 aa28.2■■■□□ 2.1
RTCA-201ENST00000260563 PLCH1Q4KWH8 1693 aa28.2■■■□□ 2.1
RTCA-201ENST00000260563 COL14A1Q05707 1796 aaKnown RBP28.2■■■□□ 2.1
RTCA-201ENST00000260563 MAP2P11137 1827 aaKnown RBP28.19■■■□□ 2.1
RTCA-201ENST00000260563 SOX12O15370 315 aa28.19■■■□□ 2.1
RTCA-201ENST00000260563 ADAMTS2O95450 1211 aa28.18■■■□□ 2.1
RTCA-201ENST00000260563 CC2D1BQ5T0F9 858 aaKnown RBP28.18■■■□□ 2.1
RTCA-201ENST00000260563 ANP32CO43423 234 aa28.17■■■□□ 2.1
RTCA-201ENST00000260563 MEX3CQ5U5Q3 659 aaKnown RBP28.17■■■□□ 2.1
RTCA-201ENST00000260563 CPDO75976 1380 aa28.15■■■□□ 2.1
RTCA-201ENST00000260563 KIAA0232Q92628 1395 aa28.15■■■□□ 2.1
RTCA-201ENST00000260563 NWD2Q9ULI1 1742 aa28.15■■■□□ 2.1
RTCA-201ENST00000260563 ZC3H6P61129 1189 aaKnown RBP28.14■■■□□ 2.1
RTCA-201ENST00000260563 CNGB1Q14028 1251 aaPredicted RBP28.14■■■□□ 2.1
RTCA-201ENST00000260563 MORC1Q86VD1 984 aa28.14■■■□□ 2.1
RTCA-201ENST00000260563 RGPD5Q99666 1765 aa28.13■■■□□ 2.09
RTCA-201ENST00000260563 LMO7Q8WWI1 1683 aa28.13■■■□□ 2.09
RTCA-201ENST00000260563 MIER1Q8N108 512 aa28.13■■■□□ 2.09
RTCA-201ENST00000260563 ABCC6O95255 1503 aa28.12■■■□□ 2.09
RTCA-201ENST00000260563 COL18A1P39060 1754 aa28.12■■■□□ 2.09
RTCA-201ENST00000260563 PRDM11Q9NQV5 511 aa28.12■■■□□ 2.09
RTCA-201ENST00000260563 ZBTB7CA1YPR0 619 aa28.1■■■□□ 2.09
RTCA-201ENST00000260563 AATKQ6ZMQ8 1374 aa28.1■■■□□ 2.09
RTCA-201ENST00000260563 NRAPQ86VF7 1730 aa28.09■■■□□ 2.09
RTCA-201ENST00000260563 C8orf37Q96NL8 207 aa28.09■■■□□ 2.09
RTCA-201ENST00000260563 TNNT2P45379 298 aaPredicted RBP28.08■■■□□ 2.09
RTCA-201ENST00000260563 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.08■■■□□ 2.09
RTCA-201ENST00000260563 PEAK1Q9H792 1746 aa28.08■■■□□ 2.09
RTCA-201ENST00000260563 ARHGEF25Q86VW2 580 aa28.08■■■□□ 2.08
RTCA-201ENST00000260563 FBLN1P23142 703 aa28.06■■■□□ 2.08
RTCA-201ENST00000260563 CHRNA2Q15822 529 aa28.06■■■□□ 2.08
RTCA-201ENST00000260563 PRKRIP1Q9H875 184 aaPredicted RBP28.06■■■□□ 2.08
RTCA-201ENST00000260563 RRS1Q15050 365 aaKnown RBP28.05■■■□□ 2.08
RTCA-201ENST00000260563 MAP3K19Q56UN5 1328 aa28.05■■■□□ 2.08
RTCA-201ENST00000260563 SLIT2O94813 1529 aa28.04■■■□□ 2.08
RTCA-201ENST00000260563 FAM83GA6ND36 823 aa28.04■■■□□ 2.08
RTCA-201ENST00000260563 NGLY1Q96IV0 654 aa28.04■■■□□ 2.08
RTCA-201ENST00000260563 RTL1A6NKG5 1358 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms