RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 MEX3CQ5U5Q3 659 aaKnown RBP21.32■■□□□ 1
GYPC-201ENST00000259254 SOS2Q07890 1332 aaPredicted RBP21.31■■□□□ 1
GYPC-201ENST00000259254 PER1O15534 1290 aaPredicted RBP21.31■■□□□ 1
GYPC-201ENST00000259254 ANP32CO43423 234 aa21.31■■□□□ 1
GYPC-201ENST00000259254 ZNF692Q9BU19 519 aaPredicted RBP21.31■■□□□ 1
GYPC-201ENST00000259254 KIF1AQ12756 1690 aa21.31■■□□□ 1
GYPC-201ENST00000259254 RGPD8O14715 1765 aaPredicted RBP21.31■■□□□ 1
GYPC-201ENST00000259254 CPSF1Q10570 1443 aaKnown RBP21.29■■□□□ 1
GYPC-201ENST00000259254 ITSN1Q15811 1721 aa21.29■■□□□ 1
GYPC-201ENST00000259254 POLR3AO14802 1390 aaPredicted RBP21.28■■□□□ 1
GYPC-201ENST00000259254 NUTM2BA6NNL0 878 aaPredicted RBP21.28■■□□□ 1
GYPC-201ENST00000259254 NUTM2EB1AL46 878 aaPredicted RBP21.28■■□□□ 1
GYPC-201ENST00000259254 CC2D1BQ5T0F9 858 aaKnown RBP21.28■■□□□ 1
GYPC-201ENST00000259254 NUTM2AQ8IVF1 878 aaPredicted RBP21.28■■□□□ 1
GYPC-201ENST00000259254 COL22A1Q8NFW1 1626 aaPredicted RBP21.28■■□□□ 1
GYPC-201ENST00000259254 CGNL1Q0VF96 1302 aa21.28■■□□□ 1
GYPC-201ENST00000259254 PXDNQ92626 1479 aa21.27■■□□□ 1
GYPC-201ENST00000259254 PSME1Q06323 249 aa21.27■■□□□ 1
GYPC-201ENST00000259254 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.27■■□□□ 1
GYPC-201ENST00000259254 NPHP3Q7Z494 1330 aa21.27■□□□□ 0.99
GYPC-201ENST00000259254 FOXO3O43524 673 aa21.26■□□□□ 0.99
GYPC-201ENST00000259254 EDC4Q6P2E9 1401 aaKnown RBP21.26■□□□□ 0.99
GYPC-201ENST00000259254 USP6P35125 1406 aa21.25■□□□□ 0.99
GYPC-201ENST00000259254 AMER1Q5JTC6 1135 aaPredicted RBP21.24■□□□□ 0.99
GYPC-201ENST00000259254 ZNF772Q68DY9 489 aaPredicted RBP21.24■□□□□ 0.99
GYPC-201ENST00000259254 TTC21BQ7Z4L5 1316 aa21.23■□□□□ 0.99
GYPC-201ENST00000259254 PAK3O75914 559 aaPredicted RBP21.22■□□□□ 0.99
GYPC-201ENST00000259254 XPCQ01831 940 aaPredicted RBP21.22■□□□□ 0.99
GYPC-201ENST00000259254 MIER1Q8N108 512 aa21.21■□□□□ 0.99
GYPC-201ENST00000259254 KRT28Q7Z3Y7 464 aa21.2■□□□□ 0.98
GYPC-201ENST00000259254 NME9Q86XW9 330 aa21.2■□□□□ 0.98
GYPC-201ENST00000259254 GGNBP2Q9H3C7 697 aa21.2■□□□□ 0.98
GYPC-201ENST00000259254 PRKRIP1Q9H875 184 aaPredicted RBP21.2■□□□□ 0.98
GYPC-201ENST00000259254 MARF1Q9Y4F3 1742 aaKnown RBP21.2■□□□□ 0.98
GYPC-201ENST00000259254 NSD2O96028 1365 aa21.2■□□□□ 0.98
GYPC-201ENST00000259254 NPC1L1Q9UHC9 1359 aa21.2■□□□□ 0.98
GYPC-201ENST00000259254 MORC1Q86VD1 984 aa21.19■□□□□ 0.98
GYPC-201ENST00000259254 AFF2P51816 1311 aa21.19■□□□□ 0.98
GYPC-201ENST00000259254 TTC21AQ8NDW8 1320 aa21.19■□□□□ 0.98
GYPC-201ENST00000259254 FYB1O15117 783 aa21.18■□□□□ 0.98
GYPC-201ENST00000259254 RALBP1Q15311 655 aa21.18■□□□□ 0.98
GYPC-201ENST00000259254 BRD4O60885 1362 aaPredicted RBP21.18■□□□□ 0.98
GYPC-201ENST00000259254 AKAP12Q02952 1782 aa21.18■□□□□ 0.98
GYPC-201ENST00000259254 C8orf37Q96NL8 207 aa21.17■□□□□ 0.98
GYPC-201ENST00000259254 MON2Q7Z3U7 1717 aa21.17■□□□□ 0.98
GYPC-201ENST00000259254 SSH2Q76I76 1423 aa21.16■□□□□ 0.98
GYPC-201ENST00000259254 ADAMTS2O95450 1211 aa21.15■□□□□ 0.98
GYPC-201ENST00000259254 LMOD2Q6P5Q4 547 aa21.15■□□□□ 0.98
GYPC-201ENST00000259254 COG3Q96JB2 828 aa21.15■□□□□ 0.98
GYPC-201ENST00000259254 PARD3Q8TEW0 1356 aa21.14■□□□□ 0.98
GYPC-201ENST00000259254 TNNT2P45379 298 aaPredicted RBP21.14■□□□□ 0.97
GYPC-201ENST00000259254 ABTB2Q8N961 1025 aa21.14■□□□□ 0.97
GYPC-201ENST00000259254 ZRANB1Q9UGI0 708 aa21.14■□□□□ 0.97
GYPC-201ENST00000259254 NRKQ7Z2Y5 1582 aa21.14■□□□□ 0.97
GYPC-201ENST00000259254 SPATA31A3Q5VYP0 1347 aa21.12■□□□□ 0.97
GYPC-201ENST00000259254 NUTM2GQ5VZR2 741 aa21.12■□□□□ 0.97
GYPC-201ENST00000259254 CDK12Q9NYV4 1490 aaPredicted RBP21.12■□□□□ 0.97
GYPC-201ENST00000259254 MYBBP1AQ9BQG0 1328 aaKnown RBP21.11■□□□□ 0.97
GYPC-201ENST00000259254 NLRP6P59044 892 aa21.11■□□□□ 0.97
GYPC-201ENST00000259254 RXRBP28702 533 aa21.1■□□□□ 0.97
GYPC-201ENST00000259254 NGLY1Q96IV0 654 aa21.1■□□□□ 0.97
GYPC-201ENST00000259254 TNS3Q68CZ2 1445 aa21.1■□□□□ 0.97
GYPC-201ENST00000259254 SBNO1A3KN83 1393 aa21.1■□□□□ 0.97
GYPC-201ENST00000259254 ABCA3Q99758 1704 aa21.09■□□□□ 0.97
GYPC-201ENST00000259254 TRPM3Q9HCF6 1732 aaPredicted RBP21.09■□□□□ 0.97
GYPC-201ENST00000259254 PLEKHG5O94827 1062 aa21.09■□□□□ 0.97
GYPC-201ENST00000259254 SOX12O15370 315 aa21.07■□□□□ 0.96
GYPC-201ENST00000259254 PPP2R1AP30153 589 aa21.07■□□□□ 0.96
GYPC-201ENST00000259254 NLRP13Q86W25 1043 aa21.07■□□□□ 0.96
GYPC-201ENST00000259254 USP31Q70CQ4 1352 aa21.07■□□□□ 0.96
GYPC-201ENST00000259254 KIF20BQ96Q89 1820 aa21.06■□□□□ 0.96
GYPC-201ENST00000259254 OVOS2A0A0J9YW53 1432 aa21.06■□□□□ 0.96
GYPC-201ENST00000259254 OVOS2Q6IE36 1432 aa21.06■□□□□ 0.96
GYPC-201ENST00000259254 FNBP4Q8N3X1 1017 aaPredicted RBP21.06■□□□□ 0.96
GYPC-201ENST00000259254 QTRT2Q9H974 415 aaKnown RBP21.06■□□□□ 0.96
GYPC-201ENST00000259254 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.05■□□□□ 0.96
GYPC-201ENST00000259254 ALS2Q96Q42 1657 aa21.05■□□□□ 0.96
GYPC-201ENST00000259254 CCER2I3L3R5 266 aa21.04■□□□□ 0.96
GYPC-201ENST00000259254 RBM6P78332 1123 aaKnown RBP21.04■□□□□ 0.96
GYPC-201ENST00000259254 USP21Q9UK80 565 aa21.04■□□□□ 0.96
GYPC-201ENST00000259254 ARHGEF10O15013 1369 aa21.04■□□□□ 0.96
GYPC-201ENST00000259254 PIK3C2AO00443 1686 aa21.03■□□□□ 0.96
GYPC-201ENST00000259254 RGS12O14924 1447 aa21.03■□□□□ 0.96
GYPC-201ENST00000259254 MRS2Q9HD23 443 aa21.02■□□□□ 0.96
GYPC-201ENST00000259254 ATRNO75882 1429 aa21.02■□□□□ 0.96
GYPC-201ENST00000259254 BCL9LQ86UU0 1499 aa21.01■□□□□ 0.95
GYPC-201ENST00000259254 FBLN1P23142 703 aa21■□□□□ 0.95
GYPC-201ENST00000259254 TRPC5Q9UL62 973 aaPredicted RBP21■□□□□ 0.95
GYPC-201ENST00000259254 ANKRD26Q9UPS8 1709 aa21■□□□□ 0.95
GYPC-201ENST00000259254 PLCH1Q4KWH8 1693 aa20.99■□□□□ 0.95
GYPC-201ENST00000259254 CRYBG1Q9Y4K1 1723 aa20.99■□□□□ 0.95
GYPC-201ENST00000259254 PPM1GO15355 546 aaPredicted RBP20.99■□□□□ 0.95
GYPC-201ENST00000259254 KCNH5Q8NCM2 988 aa20.99■□□□□ 0.95
GYPC-201ENST00000259254 SLIT2O94813 1529 aa20.99■□□□□ 0.95
GYPC-201ENST00000259254 MTHFSP49914 203 aa20.98■□□□□ 0.95
GYPC-201ENST00000259254 CCDC184Q52MB2 194 aa20.98■□□□□ 0.95
GYPC-201ENST00000259254 NWD2Q9ULI1 1742 aa20.98■□□□□ 0.95
GYPC-201ENST00000259254 AATKQ6ZMQ8 1374 aa20.97■□□□□ 0.95
GYPC-201ENST00000259254 ZBTB7CA1YPR0 619 aa20.97■□□□□ 0.95
GYPC-201ENST00000259254 HAP1P54257 671 aaPredicted RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms