RNA–Protein interactions for RNA: ENST00000257904.10

CDK4-201, Transcript of cyclin dependent kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK4, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-201ENST00000257904 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.57■■□□□ 1.04
CDK4-201ENST00000257904 NEXMIFQ5QGS0 1516 aa21.57■■□□□ 1.04
CDK4-201ENST00000257904 CT47B1P0C2W7 299 aaPredicted RBP21.56■■□□□ 1.04
CDK4-201ENST00000257904 TRHP20396 242 aaPredicted RBP21.56■■□□□ 1.04
CDK4-201ENST00000257904 TULP4Q9NRJ4 1543 aa21.56■■□□□ 1.04
CDK4-201ENST00000257904 DZIP1LQ8IYY4 767 aaKnown RBP21.56■■□□□ 1.04
CDK4-201ENST00000257904 FAM43AQ8N2R8 423 aa21.56■■□□□ 1.04
CDK4-201ENST00000257904 FTSJ3Q8IY81 847 aaKnown RBP21.55■■□□□ 1.04
CDK4-201ENST00000257904 EVC2Q86UK5 1308 aa21.55■■□□□ 1.04
CDK4-201ENST00000257904 MYO5BQ9ULV0 1848 aa21.54■■□□□ 1.04
CDK4-201ENST00000257904 ARHGEF28Q8N1W1 1705 aaKnown RBP21.53■■□□□ 1.04
CDK4-201ENST00000257904 TMEM131LA2VDJ0 1609 aa21.51■■□□□ 1.03
CDK4-201ENST00000257904 TSR2Q969E8 191 aaKnown RBP21.51■■□□□ 1.03
CDK4-201ENST00000257904 SMC4Q9NTJ3 1288 aa21.5■■□□□ 1.03
CDK4-201ENST00000257904 HDAC1Q13547 482 aaPredicted RBP21.49■■□□□ 1.03
CDK4-201ENST00000257904 L1TD1Q5T7N2 865 aaKnown RBP21.49■■□□□ 1.03
CDK4-201ENST00000257904 SPATA31D1Q6ZQQ2 1576 aa21.49■■□□□ 1.03
CDK4-201ENST00000257904 SENP3Q9H4L4 574 aaPredicted RBP21.49■■□□□ 1.03
CDK4-201ENST00000257904 TRIM27P14373 513 aa21.48■■□□□ 1.03
CDK4-201ENST00000257904 EXOSC9Q06265 439 aaKnown RBP21.48■■□□□ 1.03
CDK4-201ENST00000257904 PLEKHF1Q96S99 279 aa21.48■■□□□ 1.03
CDK4-201ENST00000257904 ESF1Q9H501 851 aaKnown RBP21.48■■□□□ 1.03
CDK4-201ENST00000257904 C22orf23Q9BZE7 217 aa21.48■■□□□ 1.03
CDK4-201ENST00000257904 DNAJC5Q9H3Z4 198 aa21.48■■□□□ 1.03
CDK4-201ENST00000257904 CABP2Q9NPB3 220 aa21.47■■□□□ 1.03
CDK4-201ENST00000257904 DDX19BQ9UMR2 479 aa21.47■■□□□ 1.03
CDK4-201ENST00000257904 ABCC11Q96J66 1382 aa21.47■■□□□ 1.03
CDK4-201ENST00000257904 ZFYVE9O95405 1425 aa21.47■■□□□ 1.03
CDK4-201ENST00000257904 COL3A1P02461 1466 aaPredicted RBP21.46■■□□□ 1.03
CDK4-201ENST00000257904 TMPOP42166 694 aaKnown RBP21.46■■□□□ 1.03
CDK4-201ENST00000257904 SSH1Q8WYL5 1049 aa21.46■■□□□ 1.03
CDK4-201ENST00000257904 TRIM35Q9UPQ4 493 aa21.46■■□□□ 1.03
CDK4-201ENST00000257904 PRKCSHP14314 528 aaPredicted RBP21.45■■□□□ 1.02
CDK4-201ENST00000257904 ATF7IPQ6VMQ6 1270 aa21.45■■□□□ 1.02
CDK4-201ENST00000257904 STAG3Q9UJ98 1225 aa21.45■■□□□ 1.02
CDK4-201ENST00000257904 A0A1W2PP64 1363 aa21.45■■□□□ 1.02
CDK4-201ENST00000257904 MFAP1P55081 439 aaKnown RBP21.44■■□□□ 1.02
CDK4-201ENST00000257904 ITPRIPQ8IWB1 547 aa21.44■■□□□ 1.02
CDK4-201ENST00000257904 U2SURPO15042 1029 aaKnown RBP21.44■■□□□ 1.02
CDK4-201ENST00000257904 IL16Q14005 1332 aa21.43■■□□□ 1.02
CDK4-201ENST00000257904 MCM4P33991 863 aa21.43■■□□□ 1.02
CDK4-201ENST00000257904 SMC5Q8IY18 1101 aa21.43■■□□□ 1.02
CDK4-201ENST00000257904 SPRYD3Q8NCJ5 442 aa21.43■■□□□ 1.02
CDK4-201ENST00000257904 CHMP5Q9NZZ3 219 aa21.41■■□□□ 1.02
CDK4-201ENST00000257904 NOB1Q9ULX3 412 aaKnown RBP21.41■■□□□ 1.02
CDK4-201ENST00000257904 GGNBP2Q9H3C7 697 aa21.4■■□□□ 1.02
CDK4-201ENST00000257904 TMEM57Q8N5G2 664 aa21.39■■□□□ 1.01
CDK4-201ENST00000257904 ZBTB40Q9NUA8 1239 aa21.39■■□□□ 1.01
CDK4-201ENST00000257904 STK26Q9P289 416 aa21.39■■□□□ 1.01
CDK4-201ENST00000257904 A2ML1A8K2U0 1454 aa21.38■■□□□ 1.01
CDK4-201ENST00000257904 MED14O60244 1454 aa21.38■■□□□ 1.01
CDK4-201ENST00000257904 ANKRD26Q9UPS8 1709 aa21.38■■□□□ 1.01
CDK4-201ENST00000257904 FSD2A1L4K1 749 aa21.38■■□□□ 1.01
CDK4-201ENST00000257904 SAFB2Q14151 953 aaKnown RBP eCLIP21.38■■□□□ 1.01
CDK4-201ENST00000257904 RSPH6AQ9H0K4 717 aa21.38■■□□□ 1.01
CDK4-201ENST00000257904 KIF16BQ96L93 1317 aa21.37■■□□□ 1.01
CDK4-201ENST00000257904 GOLGA6L3A6NEY3 463 aa21.36■■□□□ 1.01
CDK4-201ENST00000257904 SRPK2P78362 688 aaKnown RBP21.36■■□□□ 1.01
CDK4-201ENST00000257904 RIPK4P57078 832 aa21.36■■□□□ 1.01
CDK4-201ENST00000257904 XRCC6P12956 609 aaKnown RBP eCLIP21.35■■□□□ 1.01
CDK4-201ENST00000257904 HSCBQ8IWL3 235 aa21.35■■□□□ 1.01
CDK4-201ENST00000257904 FYB1O15117 783 aa21.35■■□□□ 1.01
CDK4-201ENST00000257904 IPO8O15397 1037 aaKnown RBP21.35■■□□□ 1.01
CDK4-201ENST00000257904 ATAD2Q6PL18 1390 aa21.34■■□□□ 1.01
CDK4-201ENST00000257904 NCOA3Q9Y6Q9 1424 aa21.34■■□□□ 1.01
CDK4-201ENST00000257904 NUCB1Q02818 461 aa21.34■■□□□ 1.01
CDK4-201ENST00000257904 RRAGDQ9NQL2 400 aaPredicted RBP21.34■■□□□ 1.01
CDK4-201ENST00000257904 ZNF692Q9BU19 519 aaPredicted RBP21.33■■□□□ 1.01
CDK4-201ENST00000257904 TNRQ92752 1358 aa21.33■■□□□ 1.01
CDK4-201ENST00000257904 CD163L1Q9NR16 1453 aa21.33■■□□□ 1.01
CDK4-201ENST00000257904 TRAK2O60296 914 aa21.33■■□□□ 1
CDK4-201ENST00000257904 RBM25P49756 843 aaKnown RBP21.33■■□□□ 1
CDK4-201ENST00000257904 ALDH1L2Q3SY69 923 aa21.33■■□□□ 1
CDK4-201ENST00000257904 TERF2IPQ9NYB0 399 aa21.33■■□□□ 1
CDK4-201ENST00000257904 PNPLA6Q8IY17 1366 aa21.32■■□□□ 1
CDK4-201ENST00000257904 PTPRMP28827 1452 aa21.32■■□□□ 1
CDK4-201ENST00000257904 ALKQ9UM73 1620 aa21.32■■□□□ 1
CDK4-201ENST00000257904 DIAPH1O60610 1272 aaKnown RBP21.32■■□□□ 1
CDK4-201ENST00000257904 GZF1Q9H116 711 aaPredicted RBP21.32■■□□□ 1
CDK4-201ENST00000257904 PNNQ9H307 717 aaKnown RBP21.32■■□□□ 1
CDK4-201ENST00000257904 YTHDC2Q9H6S0 1430 aaKnown RBP21.3■■□□□ 1
CDK4-201ENST00000257904 RIMS2Q9UQ26 1411 aa21.3■■□□□ 1
CDK4-201ENST00000257904 EIF5BO60841 1220 aaKnown RBP21.3■■□□□ 1
CDK4-201ENST00000257904 DDIT3P35638 169 aa21.3■■□□□ 1
CDK4-201ENST00000257904 SNX21Q969T3 373 aa21.3■■□□□ 1
CDK4-201ENST00000257904 ARXQ96QS3 562 aa21.3■■□□□ 1
CDK4-201ENST00000257904 DDX11L8A8MPP1 907 aa21.29■■□□□ 1
CDK4-201ENST00000257904 LNPKQ9C0E8 428 aa21.29■■□□□ 1
CDK4-201ENST00000257904 CDC42BPGQ6DT37 1551 aa21.29■■□□□ 1
CDK4-201ENST00000257904 CHD1LQ86WJ1 897 aa21.28■■□□□ 1
CDK4-201ENST00000257904 PRAM1Q96QH2 718 aa21.28■■□□□ 1
CDK4-201ENST00000257904 LRRC7Q96NW7 1537 aa21.27■■□□□ 1
CDK4-201ENST00000257904 BRPF1P55201 1214 aaPredicted RBP21.27■■□□□ 1
CDK4-201ENST00000257904 MINK1Q8N4C8 1332 aaPredicted RBP21.27■■□□□ 1
CDK4-201ENST00000257904 PANK2Q9BZ23 570 aa21.27■□□□□ 0.99
CDK4-201ENST00000257904 BMP2KLQ5H9B9 411 aa21.26■□□□□ 0.99
CDK4-201ENST00000257904 ZNF428Q96B54 188 aa21.26■□□□□ 0.99
CDK4-201ENST00000257904 PPIP5K1Q6PFW1 1433 aa21.25■□□□□ 0.99
CDK4-201ENST00000257904 FCHSD2O94868 740 aa21.25■□□□□ 0.99
CDK4-201ENST00000257904 CEBPAP49715 358 aaPredicted RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms