RNA–Protein interactions for RNA: ENST00000253408.10

GFAP-201, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5 BASIC

Gene GFAP, Length 3,135 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-201ENST00000253408 TRIM44Q96DX7 344 aaPredicted RBP17.32■□□□□ 0.36
GFAP-201ENST00000253408 ZBTB40Q9NUA8 1239 aa17.32■□□□□ 0.36
GFAP-201ENST00000253408 SMC5Q8IY18 1101 aa17.32■□□□□ 0.36
GFAP-201ENST00000253408 TNPO1Q92973 898 aaKnown RBP17.32■□□□□ 0.36
GFAP-201ENST00000253408 TERF2IPQ9NYB0 399 aa17.32■□□□□ 0.36
GFAP-201ENST00000253408 QRICH2Q9H0J4 1663 aa17.31■□□□□ 0.36
GFAP-201ENST00000253408 KIF16BQ96L93 1317 aa17.31■□□□□ 0.36
GFAP-201ENST00000253408 PLEKHF1Q96S99 279 aa17.31■□□□□ 0.36
GFAP-201ENST00000253408 GRPEL1Q9HAV7 217 aa17.31■□□□□ 0.36
GFAP-201ENST00000253408 FYB1O15117 783 aa17.31■□□□□ 0.36
GFAP-201ENST00000253408 CD109Q6YHK3 1445 aa17.31■□□□□ 0.36
GFAP-201ENST00000253408 NPATQ14207 1427 aa17.3■□□□□ 0.36
GFAP-201ENST00000253408 EFCAB6Q5THR3 1501 aa17.3■□□□□ 0.36
GFAP-201ENST00000253408 DEPDC5O75140 1603 aa17.3■□□□□ 0.36
GFAP-201ENST00000253408 STAG3Q9UJ98 1225 aa17.3■□□□□ 0.36
GFAP-201ENST00000253408 RAPGEF3O95398 923 aa17.3■□□□□ 0.36
GFAP-201ENST00000253408 CT47B1P0C2W7 299 aaPredicted RBP17.3■□□□□ 0.36
GFAP-201ENST00000253408 NCLP19338 710 aaKnown RBP17.3■□□□□ 0.36
GFAP-201ENST00000253408 MRE11P49959 708 aa17.3■□□□□ 0.36
GFAP-201ENST00000253408 NUCB1Q02818 461 aa17.29■□□□□ 0.36
GFAP-201ENST00000253408 PPRC1Q5VV67 1664 aaKnown RBP17.29■□□□□ 0.36
GFAP-201ENST00000253408 HDGFL2Q7Z4V5 671 aaPredicted RBP17.29■□□□□ 0.36
GFAP-201ENST00000253408 CABP1Q9NZU7 370 aa17.29■□□□□ 0.36
GFAP-201ENST00000253408 GBP4Q96PP9 640 aa17.28■□□□□ 0.36
GFAP-201ENST00000253408 FSD2A1L4K1 749 aa17.27■□□□□ 0.36
GFAP-201ENST00000253408 CD2BP2O95400 341 aaKnown RBP17.27■□□□□ 0.36
GFAP-201ENST00000253408 IDI1Q13907 227 aa17.27■□□□□ 0.36
GFAP-201ENST00000253408 TSPYL6Q8N831 410 aa17.27■□□□□ 0.36
GFAP-201ENST00000253408 INO80Q9ULG1 1556 aaPredicted RBP17.26■□□□□ 0.35
GFAP-201ENST00000253408 VWDEQ8N2E2 1590 aa17.25■□□□□ 0.35
GFAP-201ENST00000253408 MROH1Q8NDA8 1641 aa17.25■□□□□ 0.35
GFAP-201ENST00000253408 PHACTR3Q96KR7 559 aa17.25■□□□□ 0.35
GFAP-201ENST00000253408 UHRF1BP1LA0JNW5 1464 aa17.25■□□□□ 0.35
GFAP-201ENST00000253408 TBC1D9Q6ZT07 1266 aa17.24■□□□□ 0.35
GFAP-201ENST00000253408 ASXL2Q76L83 1435 aa17.24■□□□□ 0.35
GFAP-201ENST00000253408 NSD2O96028 1365 aa17.24■□□□□ 0.35
GFAP-201ENST00000253408 RPGRIP1LQ68CZ1 1315 aa17.24■□□□□ 0.35
GFAP-201ENST00000253408 SSFA2P28290 1259 aa17.24■□□□□ 0.35
GFAP-201ENST00000253408 CDK19Q9BWU1 502 aa17.23■□□□□ 0.35
GFAP-201ENST00000253408 ZMYM3Q14202 1370 aa17.23■□□□□ 0.35
GFAP-201ENST00000253408 GAS2L3Q86XJ1 694 aa17.23■□□□□ 0.35
GFAP-201ENST00000253408 ADGRB3O60242 1522 aa17.23■□□□□ 0.35
GFAP-201ENST00000253408 ABCC11Q96J66 1382 aa17.23■□□□□ 0.35
GFAP-201ENST00000253408 NRXN1Q9ULB1 1477 aa17.23■□□□□ 0.35
GFAP-201ENST00000253408 ZNF692Q9BU19 519 aaPredicted RBP17.23■□□□□ 0.35
GFAP-201ENST00000253408 TULP4Q9NRJ4 1543 aa17.22■□□□□ 0.35
GFAP-201ENST00000253408 DCTN1Q14203 1278 aa17.22■□□□□ 0.35
GFAP-201ENST00000253408 ATAD2Q6PL18 1390 aa17.22■□□□□ 0.35
GFAP-201ENST00000253408 RBM25P49756 843 aaKnown RBP17.22■□□□□ 0.35
GFAP-201ENST00000253408 ADGRB1O14514 1584 aa17.21■□□□□ 0.35
GFAP-201ENST00000253408 GOLGA6L22H0YM25 854 aa17.21■□□□□ 0.35
GFAP-201ENST00000253408 DDX49Q9Y6V7 483 aaKnown RBP17.21■□□□□ 0.35
GFAP-201ENST00000253408 K7ELQ4 463 aaPredicted RBP17.21■□□□□ 0.34
GFAP-201ENST00000253408 BMP2KLQ5H9B9 411 aa17.21■□□□□ 0.34
GFAP-201ENST00000253408 UBE2Q2Q8WVN8 375 aa17.21■□□□□ 0.34
GFAP-201ENST00000253408 EMILIN1Q9Y6C2 1016 aa17.21■□□□□ 0.34
GFAP-201ENST00000253408 FAM83GA6ND36 823 aa17.2■□□□□ 0.34
GFAP-201ENST00000253408 ESPNB1AK53 854 aa17.2■□□□□ 0.34
GFAP-201ENST00000253408 GAS2L2Q8NHY3 880 aa17.2■□□□□ 0.34
GFAP-201ENST00000253408 MYO3AQ8NEV4 1616 aa17.2■□□□□ 0.34
GFAP-201ENST00000253408 ZBTB7BO15156 539 aaPredicted RBP17.2■□□□□ 0.34
GFAP-201ENST00000253408 FOXD4L5Q5VV16 416 aaPredicted RBP17.2■□□□□ 0.34
GFAP-201ENST00000253408 WAPLQ7Z5K2 1190 aa17.2■□□□□ 0.34
GFAP-201ENST00000253408 FOXD4L4Q8WXT5 416 aaPredicted RBP17.2■□□□□ 0.34
GFAP-201ENST00000253408 ALDH1L2Q3SY69 923 aa17.19■□□□□ 0.34
GFAP-201ENST00000253408 GLI2P10070 1586 aa17.19■□□□□ 0.34
GFAP-201ENST00000253408 SETBP1Q9Y6X0 1596 aa17.19■□□□□ 0.34
GFAP-201ENST00000253408 IL16Q14005 1332 aa17.19■□□□□ 0.34
GFAP-201ENST00000253408 CLCN1P35523 988 aa17.19■□□□□ 0.34
GFAP-201ENST00000253408 TWISTNBQ3B726 338 aaPredicted RBP17.19■□□□□ 0.34
GFAP-201ENST00000253408 C16orf71Q8IYS4 520 aaPredicted RBP17.19■□□□□ 0.34
GFAP-201ENST00000253408 IFT172Q9UG01 1749 aa17.18■□□□□ 0.34
GFAP-201ENST00000253408 VAMP4O75379 141 aa17.18■□□□□ 0.34
GFAP-201ENST00000253408 FCHSD2O94868 740 aa17.18■□□□□ 0.34
GFAP-201ENST00000253408 ANP32BQ92688 251 aaKnown RBP17.18■□□□□ 0.34
GFAP-201ENST00000253408 SNX21Q969T3 373 aa17.18■□□□□ 0.34
GFAP-201ENST00000253408 GCC1Q96CN9 775 aa17.18■□□□□ 0.34
GFAP-201ENST00000253408 ZRANB1Q9UGI0 708 aa17.18■□□□□ 0.34
GFAP-201ENST00000253408 SOX12O15370 315 aa17.18■□□□□ 0.34
GFAP-201ENST00000253408 RAB3GAP1Q15042 981 aa17.18■□□□□ 0.34
GFAP-201ENST00000253408 MCTP1Q6DN14 999 aa17.18■□□□□ 0.34
GFAP-201ENST00000253408 MRPL50Q8N5N7 158 aaKnown RBP17.18■□□□□ 0.34
GFAP-201ENST00000253408 MBIPQ9NS73 344 aa17.17■□□□□ 0.34
GFAP-201ENST00000253408 PPIP5K1Q6PFW1 1433 aa17.17■□□□□ 0.34
GFAP-201ENST00000253408 ERBB4Q15303 1308 aa17.17■□□□□ 0.34
GFAP-201ENST00000253408 KIDINS220Q9ULH0 1771 aa17.17■□□□□ 0.34
GFAP-201ENST00000253408 ABCA9Q8IUA7 1624 aa17.17■□□□□ 0.34
GFAP-201ENST00000253408 ARAP3Q8WWN8 1544 aa17.16■□□□□ 0.34
GFAP-201ENST00000253408 RRS1Q15050 365 aaKnown RBP17.16■□□□□ 0.34
GFAP-201ENST00000253408 NFE2L2Q16236 605 aa17.16■□□□□ 0.34
GFAP-201ENST00000253408 POLKQ9UBT6 870 aa17.16■□□□□ 0.34
GFAP-201ENST00000253408 CDC45O75419 566 aa17.16■□□□□ 0.34
GFAP-201ENST00000253408 FBXO31Q5XUX0 539 aaPredicted RBP17.16■□□□□ 0.34
GFAP-201ENST00000253408 SIRT2Q8IXJ6 389 aa17.16■□□□□ 0.34
GFAP-201ENST00000253408 C8orf58Q8NAV2 365 aa17.16■□□□□ 0.34
GFAP-201ENST00000253408 KIF2CQ99661 725 aa17.16■□□□□ 0.34
GFAP-201ENST00000253408 SMARCA5O60264 1052 aaPredicted RBP17.15■□□□□ 0.34
GFAP-201ENST00000253408 GNAI1P63096 354 aa17.15■□□□□ 0.34
GFAP-201ENST00000253408 CHMP4BQ9H444 224 aaKnown RBP17.14■□□□□ 0.34
GFAP-201ENST00000253408 PPLO60437 1756 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms