RNA–Protein interactions for RNA: ENST00000253099.10

MRPL4-201, Transcript of mitochondrial ribosomal protein L4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene MRPL4, Length 1,455 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL4-201ENST00000253099 SSH2Q76I76 1423 aa34.49■■■■□ 3.11
MRPL4-201ENST00000253099 LRRC59Q96AG4 307 aaKnown RBP34.49■■■■□ 3.11
MRPL4-201ENST00000253099 CARD14Q9BXL6 1004 aa34.49■■■■□ 3.11
MRPL4-201ENST00000253099 SPATA31A3Q5VYP0 1347 aa34.48■■■■□ 3.11
MRPL4-201ENST00000253099 BRD4O60885 1362 aaPredicted RBP34.47■■■■□ 3.11
MRPL4-201ENST00000253099 EDC4Q6P2E9 1401 aaKnown RBP34.46■■■■□ 3.11
MRPL4-201ENST00000253099 TTC21BQ7Z4L5 1316 aa34.46■■■■□ 3.11
MRPL4-201ENST00000253099 NRKQ7Z2Y5 1582 aa34.45■■■■□ 3.11
MRPL4-201ENST00000253099 TNS3Q68CZ2 1445 aa34.45■■■■□ 3.11
MRPL4-201ENST00000253099 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.45■■■■□ 3.1
MRPL4-201ENST00000253099 LMOD2Q6P5Q4 547 aa34.44■■■■□ 3.1
MRPL4-201ENST00000253099 NSD3Q9BZ95 1437 aa34.41■■■■□ 3.1
MRPL4-201ENST00000253099 ALS2Q96Q42 1657 aa34.41■■■■□ 3.1
MRPL4-201ENST00000253099 ILDR1Q86SU0 546 aaPredicted RBP34.39■■■■□ 3.1
MRPL4-201ENST00000253099 ABTB2Q8N961 1025 aa34.39■■■■□ 3.1
MRPL4-201ENST00000253099 TTC21AQ8NDW8 1320 aa34.39■■■■□ 3.1
MRPL4-201ENST00000253099 ARHGEF10O15013 1369 aa34.37■■■■□ 3.09
MRPL4-201ENST00000253099 DDX10Q13206 875 aaKnown RBP34.37■■■■□ 3.09
MRPL4-201ENST00000253099 NUTM2GQ5VZR2 741 aa34.37■■■■□ 3.09
MRPL4-201ENST00000253099 PNPLA6Q8IY17 1366 aa34.36■■■■□ 3.09
MRPL4-201ENST00000253099 JCADQ9P266 1359 aa34.35■■■■□ 3.09
MRPL4-201ENST00000253099 NME9Q86XW9 330 aa34.35■■■■□ 3.09
MRPL4-201ENST00000253099 PIK3C2AO00443 1686 aa34.34■■■■□ 3.09
MRPL4-201ENST00000253099 PER1O15534 1290 aaPredicted RBP34.33■■■■□ 3.09
MRPL4-201ENST00000253099 ZRANB1Q9UGI0 708 aa34.33■■■■□ 3.09
MRPL4-201ENST00000253099 KNSTRNQ9Y448 316 aa34.32■■■■□ 3.08
MRPL4-201ENST00000253099 FYB1O15117 783 aa34.31■■■■□ 3.08
MRPL4-201ENST00000253099 PLEKHG5O94827 1062 aa34.31■■■■□ 3.08
MRPL4-201ENST00000253099 NLRP6P59044 892 aa34.31■■■■□ 3.08
MRPL4-201ENST00000253099 SHPRHQ149N8 1683 aa34.31■■■■□ 3.08
MRPL4-201ENST00000253099 CGNL1Q0VF96 1302 aa34.29■■■■□ 3.08
MRPL4-201ENST00000253099 NLRP13Q86W25 1043 aa34.28■■■■□ 3.08
MRPL4-201ENST00000253099 CABLES1Q8TDN4 633 aa34.27■■■■□ 3.08
MRPL4-201ENST00000253099 COL22A1Q8NFW1 1626 aaPredicted RBP34.27■■■■□ 3.08
MRPL4-201ENST00000253099 GGNBP2Q9H3C7 697 aa34.27■■■■□ 3.08
MRPL4-201ENST00000253099 USP31Q70CQ4 1352 aa34.26■■■■□ 3.07
MRPL4-201ENST00000253099 KIF20BQ96Q89 1820 aa34.24■■■■□ 3.07
MRPL4-201ENST00000253099 MED1Q15648 1581 aaPredicted RBP34.23■■■■□ 3.07
MRPL4-201ENST00000253099 AMER1Q5JTC6 1135 aaPredicted RBP34.23■■■■□ 3.07
MRPL4-201ENST00000253099 MARF1Q9Y4F3 1742 aaKnown RBP34.22■■■■□ 3.07
MRPL4-201ENST00000253099 USP19O94966 1318 aa34.22■■■■□ 3.07
MRPL4-201ENST00000253099 OVOS2A0A0J9YW53 1432 aa34.21■■■■□ 3.07
MRPL4-201ENST00000253099 OVOS2Q6IE36 1432 aa34.21■■■■□ 3.07
MRPL4-201ENST00000253099 COG3Q96JB2 828 aa34.2■■■■□ 3.07
MRPL4-201ENST00000253099 SPATA31A6Q5VVP1 1343 aa34.2■■■■□ 3.07
MRPL4-201ENST00000253099 NUTM2BA6NNL0 878 aaPredicted RBP34.2■■■■□ 3.06
MRPL4-201ENST00000253099 NUTM2EB1AL46 878 aaPredicted RBP34.2■■■■□ 3.06
MRPL4-201ENST00000253099 NUTM2AQ8IVF1 878 aaPredicted RBP34.2■■■■□ 3.06
MRPL4-201ENST00000253099 USP54Q70EL1 1684 aa34.19■■■■□ 3.06
MRPL4-201ENST00000253099 CRYBG1Q9Y4K1 1723 aa34.19■■■■□ 3.06
MRPL4-201ENST00000253099 ABCA3Q99758 1704 aa34.16■■■■□ 3.06
MRPL4-201ENST00000253099 HAP1P54257 671 aaPredicted RBP34.16■■■■□ 3.06
MRPL4-201ENST00000253099 NSD2O96028 1365 aa34.15■■■■□ 3.06
MRPL4-201ENST00000253099 GCP02774 474 aa34.15■■■■□ 3.06
MRPL4-201ENST00000253099 PHRF1Q9P1Y6 1649 aaKnown RBP34.15■■■■□ 3.06
MRPL4-201ENST00000253099 SLIT3O75094 1523 aa34.15■■■■□ 3.06
MRPL4-201ENST00000253099 CC2D1BQ5T0F9 858 aaKnown RBP34.14■■■■□ 3.06
MRPL4-201ENST00000253099 SOX12O15370 315 aa34.14■■■■□ 3.06
MRPL4-201ENST00000253099 CNGB1Q14028 1251 aaPredicted RBP34.14■■■■□ 3.06
MRPL4-201ENST00000253099 NPC1L1Q9UHC9 1359 aa34.12■■■■□ 3.05
MRPL4-201ENST00000253099 LRP6O75581 1613 aa34.11■■■■□ 3.05
MRPL4-201ENST00000253099 ANKRD26Q9UPS8 1709 aa34.11■■■■□ 3.05
MRPL4-201ENST00000253099 KCNH5Q8NCM2 988 aa34.1■■■■□ 3.05
MRPL4-201ENST00000253099 ADAMTS2O95450 1211 aa34.09■■■■□ 3.05
MRPL4-201ENST00000253099 ZC3H6P61129 1189 aaKnown RBP34.08■■■■□ 3.05
MRPL4-201ENST00000253099 MORC1Q86VD1 984 aa34.08■■■■□ 3.05
MRPL4-201ENST00000253099 FBLN1P23142 703 aa34.07■■■■□ 3.05
MRPL4-201ENST00000253099 NFAT5O94916 1531 aa34.07■■■■□ 3.04
MRPL4-201ENST00000253099 TNNT2P45379 298 aaPredicted RBP34.05■■■■□ 3.04
MRPL4-201ENST00000253099 KIAA0232Q92628 1395 aa34.03■■■■□ 3.04
MRPL4-201ENST00000253099 CPDO75976 1380 aa34.01■■■■□ 3.03
MRPL4-201ENST00000253099 ARHGEF25Q86VW2 580 aa34.01■■■■□ 3.03
MRPL4-201ENST00000253099 MEX3CQ5U5Q3 659 aaKnown RBP34■■■■□ 3.03
MRPL4-201ENST00000253099 PRDM11Q9NQV5 511 aa34■■■■□ 3.03
MRPL4-201ENST00000253099 ZBTB7CA1YPR0 619 aa33.99■■■■□ 3.03
MRPL4-201ENST00000253099 FAM83GA6ND36 823 aa33.99■■■■□ 3.03
MRPL4-201ENST00000253099 RRS1Q15050 365 aaKnown RBP33.98■■■■□ 3.03
MRPL4-201ENST00000253099 CHRNA2Q15822 529 aa33.98■■■■□ 3.03
MRPL4-201ENST00000253099 C8orf37Q96NL8 207 aa33.96■■■■□ 3.03
MRPL4-201ENST00000253099 AATKQ6ZMQ8 1374 aa33.96■■■■□ 3.03
MRPL4-201ENST00000253099 MAP3K19Q56UN5 1328 aa33.95■■■■□ 3.03
MRPL4-201ENST00000253099 LTN1O94822 1766 aa33.94■■■■□ 3.02
MRPL4-201ENST00000253099 NGLY1Q96IV0 654 aa33.93■■■■□ 3.02
MRPL4-201ENST00000253099 MAP2P11137 1827 aaKnown RBP33.92■■■■□ 3.02
MRPL4-201ENST00000253099 PARD3Q8TEW0 1356 aa33.91■■■■□ 3.02
MRPL4-201ENST00000253099 POLKQ9UBT6 870 aa33.91■■■■□ 3.02
MRPL4-201ENST00000253099 EMILIN1Q9Y6C2 1016 aa33.91■■■■□ 3.02
MRPL4-201ENST00000253099 COL14A1Q05707 1796 aaKnown RBP33.9■■■■□ 3.02
MRPL4-201ENST00000253099 COL18A1P39060 1754 aa33.88■■■■□ 3.01
MRPL4-201ENST00000253099 AMPHP49418 695 aa33.88■■■■□ 3.01
MRPL4-201ENST00000253099 AXIN2Q9Y2T1 843 aa33.88■■■■□ 3.01
MRPL4-201ENST00000253099 PPM1GO15355 546 aaPredicted RBP33.87■■■■□ 3.01
MRPL4-201ENST00000253099 RALBP1Q15311 655 aa33.87■■■■□ 3.01
MRPL4-201ENST00000253099 FNBP4Q8N3X1 1017 aaPredicted RBP33.86■■■■□ 3.01
MRPL4-201ENST00000253099 PRKRIP1Q9H875 184 aaPredicted RBP33.86■■■■□ 3.01
MRPL4-201ENST00000253099 BTG4Q9NY30 223 aa33.86■■■■□ 3.01
MRPL4-201ENST00000253099 LMO7Q8WWI1 1683 aa33.85■■■■□ 3.01
MRPL4-201ENST00000253099 IP6K1Q92551 441 aa33.85■■■■□ 3.01
MRPL4-201ENST00000253099 PLCH1Q4KWH8 1693 aa33.85■■■■□ 3.01
MRPL4-201ENST00000253099 SLIT2O94813 1529 aa33.84■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms