RNA–Protein interactions for RNA: ENST00000251879.10

RIC1-201, Transcript of RIC1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 1 (best) BASIC

Gene RIC1, Length 4,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIC1-201ENST00000251879 RNF123Q5XPI4 1314 aa17.78■□□□□ 0.44
RIC1-201ENST00000251879 COG3Q96JB2 828 aa17.77■□□□□ 0.44
RIC1-201ENST00000251879 DIAPH3Q9NSV4 1193 aa17.77■□□□□ 0.44
RIC1-201ENST00000251879 IFT57Q9NWB7 429 aa17.77■□□□□ 0.44
RIC1-201ENST00000251879 SF3A1Q15459 793 aaKnown RBP17.77■□□□□ 0.44
RIC1-201ENST00000251879 XPCQ01831 940 aaPredicted RBP17.76■□□□□ 0.43
RIC1-201ENST00000251879 BICD2Q8TD16 824 aa17.76■□□□□ 0.43
RIC1-201ENST00000251879 GOLGA6L19H0YKK7 550 aa17.76■□□□□ 0.43
RIC1-201ENST00000251879 H3BQV1 296 aa17.76■□□□□ 0.43
RIC1-201ENST00000251879 RARSP54136 660 aaKnown RBP17.76■□□□□ 0.43
RIC1-201ENST00000251879 IFFO2Q5TF58 517 aa17.76■□□□□ 0.43
RIC1-201ENST00000251879 K7ELQ4 463 aaPredicted RBP17.76■□□□□ 0.43
RIC1-201ENST00000251879 ITSN2Q9NZM3 1697 aa17.76■□□□□ 0.43
RIC1-201ENST00000251879 DISP3Q9P2K9 1392 aa17.76■□□□□ 0.43
RIC1-201ENST00000251879 XRCC6P12956 609 aaKnown RBP eCLIP17.75■□□□□ 0.43
RIC1-201ENST00000251879 SSFA2P28290 1259 aa17.75■□□□□ 0.43
RIC1-201ENST00000251879 C8orf34Q49A92 452 aa17.75■□□□□ 0.43
RIC1-201ENST00000251879 DNMT1P26358 1616 aaKnown RBP17.75■□□□□ 0.43
RIC1-201ENST00000251879 CHD1LQ86WJ1 897 aa17.75■□□□□ 0.43
RIC1-201ENST00000251879 SMC3Q9UQE7 1217 aa17.75■□□□□ 0.43
RIC1-201ENST00000251879 SSH1Q8WYL5 1049 aa17.74■□□□□ 0.43
RIC1-201ENST00000251879 MAPK8IP2Q13387 824 aaPredicted RBP17.74■□□□□ 0.43
RIC1-201ENST00000251879 RALGAPBQ86X10 1494 aa17.74■□□□□ 0.43
RIC1-201ENST00000251879 ABCA8O94911 1581 aa17.74■□□□□ 0.43
RIC1-201ENST00000251879 CFAP65Q6ZU64 1925 aaKnown RBP17.74■□□□□ 0.43
RIC1-201ENST00000251879 SLC26A8Q96RN1 970 aa17.74■□□□□ 0.43
RIC1-201ENST00000251879 PCDHB15Q9Y5E8 787 aa17.74■□□□□ 0.43
RIC1-201ENST00000251879 MAP4K4O95819 1239 aaPredicted RBP17.74■□□□□ 0.43
RIC1-201ENST00000251879 LRRIQ1Q96JM4 1722 aa17.74■□□□□ 0.43
RIC1-201ENST00000251879 SYCE3A1L190 88 aa17.73■□□□□ 0.43
RIC1-201ENST00000251879 PRAM1Q96QH2 718 aa17.73■□□□□ 0.43
RIC1-201ENST00000251879 EID1Q9Y6B2 187 aa17.73■□□□□ 0.43
RIC1-201ENST00000251879 CCDC173Q0VFZ6 552 aa17.73■□□□□ 0.43
RIC1-201ENST00000251879 TNPO1Q92973 898 aaKnown RBP17.73■□□□□ 0.43
RIC1-201ENST00000251879 UQCRHLA0A096LP55 91 aa17.73■□□□□ 0.43
RIC1-201ENST00000251879 UQCRHP07919 91 aa17.73■□□□□ 0.43
RIC1-201ENST00000251879 CSPP1Q1MSJ5 1256 aa17.73■□□□□ 0.43
RIC1-201ENST00000251879 TWISTNBQ3B726 338 aaPredicted RBP17.73■□□□□ 0.43
RIC1-201ENST00000251879 NUTM2GQ5VZR2 741 aa17.72■□□□□ 0.43
RIC1-201ENST00000251879 TXNDC2Q86VQ3 553 aa17.72■□□□□ 0.43
RIC1-201ENST00000251879 FAM184AQ8NB25 1140 aa17.72■□□□□ 0.43
RIC1-201ENST00000251879 GNAI1P63096 354 aa17.72■□□□□ 0.43
RIC1-201ENST00000251879 GORABQ5T7V8 394 aa17.72■□□□□ 0.43
RIC1-201ENST00000251879 ABCC10Q5T3U5 1492 aa17.71■□□□□ 0.43
RIC1-201ENST00000251879 UPF3BQ9BZI7 483 aaKnown RBP17.71■□□□□ 0.43
RIC1-201ENST00000251879 ZMYND15Q9H091 742 aa17.7■□□□□ 0.42
RIC1-201ENST00000251879 ATP6V1DQ9Y5K8 247 aa17.7■□□□□ 0.42
RIC1-201ENST00000251879 LRPPRCP42704 1394 aaKnown RBP17.7■□□□□ 0.42
RIC1-201ENST00000251879 TSPYL4Q9UJ04 414 aa17.7■□□□□ 0.42
RIC1-201ENST00000251879 PER1O15534 1290 aaPredicted RBP17.7■□□□□ 0.42
RIC1-201ENST00000251879 SMARCA5O60264 1052 aaPredicted RBP17.7■□□□□ 0.42
RIC1-201ENST00000251879 GPATCH3Q96I76 525 aa17.7■□□□□ 0.42
RIC1-201ENST00000251879 GDPD2Q9HCC8 539 aa17.7■□□□□ 0.42
RIC1-201ENST00000251879 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.7■□□□□ 0.42
RIC1-201ENST00000251879 HTATSF1O43719 755 aaKnown RBP17.7■□□□□ 0.42
RIC1-201ENST00000251879 KDM4AO75164 1064 aa17.69■□□□□ 0.42
RIC1-201ENST00000251879 TPM2P07951 284 aa17.69■□□□□ 0.42
RIC1-201ENST00000251879 LARP6Q9BRS8 491 aaKnown RBP17.69■□□□□ 0.42
RIC1-201ENST00000251879 CEBPZQ03701 1054 aaKnown RBP17.69■□□□□ 0.42
RIC1-201ENST00000251879 DDX54Q8TDD1 881 aaKnown RBP17.69■□□□□ 0.42
RIC1-201ENST00000251879 FAM135AQ9P2D6 1515 aa17.69■□□□□ 0.42
RIC1-201ENST00000251879 DCTN1Q14203 1278 aa17.69■□□□□ 0.42
RIC1-201ENST00000251879 RBM42Q9BTD8 480 aaKnown RBP17.68■□□□□ 0.42
RIC1-201ENST00000251879 TOMM22Q9NS69 142 aa17.68■□□□□ 0.42
RIC1-201ENST00000251879 CCDC39Q9UFE4 941 aa17.68■□□□□ 0.42
RIC1-201ENST00000251879 RRP9O43818 475 aaKnown RBP17.68■□□□□ 0.42
RIC1-201ENST00000251879 SPINK5Q9NQ38 1064 aaPredicted RBP17.68■□□□□ 0.42
RIC1-201ENST00000251879 C9orf78Q9NZ63 289 aaPredicted RBP17.68■□□□□ 0.42
RIC1-201ENST00000251879 MBD5Q9P267 1494 aa17.68■□□□□ 0.42
RIC1-201ENST00000251879 PARD3Q8TEW0 1356 aa17.68■□□□□ 0.42
RIC1-201ENST00000251879 RABEP1Q15276 862 aa17.68■□□□□ 0.42
RIC1-201ENST00000251879 FMNL2Q96PY5 1086 aa17.68■□□□□ 0.42
RIC1-201ENST00000251879 WAPLQ7Z5K2 1190 aa17.67■□□□□ 0.42
RIC1-201ENST00000251879 ZKSCAN1P17029 563 aaPredicted RBP17.67■□□□□ 0.42
RIC1-201ENST00000251879 FBLN1P23142 703 aa17.67■□□□□ 0.42
RIC1-201ENST00000251879 SURF6O75683 361 aaKnown RBP17.67■□□□□ 0.42
RIC1-201ENST00000251879 ZSCAN30Q86W11 494 aa17.66■□□□□ 0.42
RIC1-201ENST00000251879 CSB-PGBD3P0DP91 1061 aa17.66■□□□□ 0.42
RIC1-201ENST00000251879 TESK2Q96S53 571 aa17.66■□□□□ 0.42
RIC1-201ENST00000251879 HOMER1Q86YM7 354 aa17.66■□□□□ 0.42
RIC1-201ENST00000251879 RBM33Q96EV2 1170 aaKnown RBP17.66■□□□□ 0.42
RIC1-201ENST00000251879 TSPY26PQ9H489 355 aa17.66■□□□□ 0.42
RIC1-201ENST00000251879 IL1RAPL2Q9NP60 686 aa17.66■□□□□ 0.42
RIC1-201ENST00000251879 TRIM5Q9C035 493 aa17.66■□□□□ 0.42
RIC1-201ENST00000251879 RRAGDQ9NQL2 400 aaPredicted RBP17.66■□□□□ 0.42
RIC1-201ENST00000251879 MIS18AQ9NYP9 233 aa17.66■□□□□ 0.42
RIC1-201ENST00000251879 SLC4A2P04920 1241 aa17.65■□□□□ 0.42
RIC1-201ENST00000251879 TRIM27P14373 513 aa17.65■□□□□ 0.42
RIC1-201ENST00000251879 TBC1D32Q96NH3 1257 aa17.65■□□□□ 0.42
RIC1-201ENST00000251879 RBM27Q9P2N5 1060 aaKnown RBP17.65■□□□□ 0.42
RIC1-201ENST00000251879 SLC52A1Q9NWF4 448 aa17.65■□□□□ 0.42
RIC1-201ENST00000251879 EXOC6BQ9Y2D4 811 aa17.65■□□□□ 0.42
RIC1-201ENST00000251879 AAMPQ13685 434 aa17.65■□□□□ 0.42
RIC1-201ENST00000251879 IFIT2P09913 472 aaKnown RBP17.64■□□□□ 0.41
RIC1-201ENST00000251879 RLBP1P12271 317 aa17.64■□□□□ 0.41
RIC1-201ENST00000251879 TMPOP42166 694 aaKnown RBP17.64■□□□□ 0.41
RIC1-201ENST00000251879 WDR63Q8IWG1 891 aa17.64■□□□□ 0.41
RIC1-201ENST00000251879 CABP1Q9NZU7 370 aa17.64■□□□□ 0.41
RIC1-201ENST00000251879 TTC37Q6PGP7 1564 aa17.64■□□□□ 0.41
RIC1-201ENST00000251879 AIMP1Q12904 312 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms