RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 ZNF219Q9P2Y4 722 aaPredicted RBP17.63■□□□□ 0.41
LSM8-201ENST00000249299 NSD3Q9BZ95 1437 aa17.62■□□□□ 0.41
LSM8-201ENST00000249299 ITSN1Q15811 1721 aa17.62■□□□□ 0.41
LSM8-201ENST00000249299 PARD3Q8TEW0 1356 aa17.61■□□□□ 0.41
LSM8-201ENST00000249299 RBM33Q96EV2 1170 aaKnown RBP17.61■□□□□ 0.41
LSM8-201ENST00000249299 ACEP12821 1306 aa17.6■□□□□ 0.41
LSM8-201ENST00000249299 PHF8Q9UPP1 1060 aa17.6■□□□□ 0.41
LSM8-201ENST00000249299 C1orf167Q5SNV9 1468 aa17.59■□□□□ 0.41
LSM8-201ENST00000249299 MST1RQ04912 1400 aa17.59■□□□□ 0.41
LSM8-201ENST00000249299 LTBP4Q8N2S1 1624 aa17.58■□□□□ 0.41
LSM8-201ENST00000249299 NGDNQ8NEJ9 315 aaKnown RBP17.58■□□□□ 0.4
LSM8-201ENST00000249299 TTC21AQ8NDW8 1320 aa17.57■□□□□ 0.4
LSM8-201ENST00000249299 USP6P35125 1406 aa17.57■□□□□ 0.4
LSM8-201ENST00000249299 SSH2Q76I76 1423 aa17.57■□□□□ 0.4
LSM8-201ENST00000249299 MYBBP1AQ9BQG0 1328 aaKnown RBP17.57■□□□□ 0.4
LSM8-201ENST00000249299 NUTM2FA1L443 756 aa17.56■□□□□ 0.4
LSM8-201ENST00000249299 DSG3P32926 999 aa17.56■□□□□ 0.4
LSM8-201ENST00000249299 ESCO1Q5FWF5 840 aa17.56■□□□□ 0.4
LSM8-201ENST00000249299 FYB1O15117 783 aa17.55■□□□□ 0.4
LSM8-201ENST00000249299 CC2D1BQ5T0F9 858 aaKnown RBP17.54■□□□□ 0.4
LSM8-201ENST00000249299 TTC21BQ7Z4L5 1316 aa17.54■□□□□ 0.4
LSM8-201ENST00000249299 NLRP13Q86W25 1043 aa17.53■□□□□ 0.4
LSM8-201ENST00000249299 PMFBP1Q8TBY8 1022 aa17.53■□□□□ 0.4
LSM8-201ENST00000249299 SLAIN2Q9P270 581 aa17.53■□□□□ 0.4
LSM8-201ENST00000249299 KIF1AQ12756 1690 aa17.53■□□□□ 0.4
LSM8-201ENST00000249299 XIRP1Q702N8 1843 aaKnown RBP17.53■□□□□ 0.4
LSM8-201ENST00000249299 IQSEC2Q5JU85 1478 aa17.53■□□□□ 0.4
LSM8-201ENST00000249299 MON2Q7Z3U7 1717 aa17.52■□□□□ 0.4
LSM8-201ENST00000249299 AKAP12Q02952 1782 aa17.52■□□□□ 0.4
LSM8-201ENST00000249299 ABCB7O75027 752 aa17.51■□□□□ 0.39
LSM8-201ENST00000249299 MORC1Q86VD1 984 aa17.51■□□□□ 0.39
LSM8-201ENST00000249299 ORAI2Q96SN7 254 aa17.5■□□□□ 0.39
LSM8-201ENST00000249299 NPHP3Q7Z494 1330 aa17.5■□□□□ 0.39
LSM8-201ENST00000249299 USP31Q70CQ4 1352 aa17.5■□□□□ 0.39
LSM8-201ENST00000249299 PSME1Q06323 249 aa17.49■□□□□ 0.39
LSM8-201ENST00000249299 NRKQ7Z2Y5 1582 aa17.48■□□□□ 0.39
LSM8-201ENST00000249299 PPP2R1AP30153 589 aa17.47■□□□□ 0.39
LSM8-201ENST00000249299 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.47■□□□□ 0.39
LSM8-201ENST00000249299 COG3Q96JB2 828 aa17.47■□□□□ 0.39
LSM8-201ENST00000249299 SBNO1A3KN83 1393 aa17.47■□□□□ 0.39
LSM8-201ENST00000249299 FOXO3O43524 673 aa17.47■□□□□ 0.39
LSM8-201ENST00000249299 BRINP3Q76B58 766 aa17.47■□□□□ 0.39
LSM8-201ENST00000249299 GGNBP2Q9H3C7 697 aa17.47■□□□□ 0.39
LSM8-201ENST00000249299 AATKQ6ZMQ8 1374 aa17.46■□□□□ 0.39
LSM8-201ENST00000249299 RGPD8O14715 1765 aaPredicted RBP17.46■□□□□ 0.39
LSM8-201ENST00000249299 POLA2Q14181 598 aa17.46■□□□□ 0.38
LSM8-201ENST00000249299 OVOS2A0A0J9YW53 1432 aa17.44■□□□□ 0.38
LSM8-201ENST00000249299 OVOS2Q6IE36 1432 aa17.44■□□□□ 0.38
LSM8-201ENST00000249299 TOM1O60784 492 aa17.44■□□□□ 0.38
LSM8-201ENST00000249299 KRT28Q7Z3Y7 464 aa17.44■□□□□ 0.38
LSM8-201ENST00000249299 NME9Q86XW9 330 aa17.44■□□□□ 0.38
LSM8-201ENST00000249299 MRS2Q9HD23 443 aa17.43■□□□□ 0.38
LSM8-201ENST00000249299 ANKRD26Q9UPS8 1709 aa17.42■□□□□ 0.38
LSM8-201ENST00000249299 KIF20BQ96Q89 1820 aa17.41■□□□□ 0.38
LSM8-201ENST00000249299 INSRP06213 1382 aa17.41■□□□□ 0.38
LSM8-201ENST00000249299 SOS2Q07890 1332 aaPredicted RBP17.41■□□□□ 0.38
LSM8-201ENST00000249299 ABTB2Q8N961 1025 aa17.41■□□□□ 0.38
LSM8-201ENST00000249299 NLRP6P59044 892 aa17.4■□□□□ 0.38
LSM8-201ENST00000249299 CNGB1Q14028 1251 aaPredicted RBP17.4■□□□□ 0.38
LSM8-201ENST00000249299 USP54Q70EL1 1684 aa17.4■□□□□ 0.38
LSM8-201ENST00000249299 ARHGEF10O15013 1369 aa17.39■□□□□ 0.37
LSM8-201ENST00000249299 KIF24Q5T7B8 1368 aa17.39■□□□□ 0.37
LSM8-201ENST00000249299 PAK3O75914 559 aaPredicted RBP17.39■□□□□ 0.37
LSM8-201ENST00000249299 CFAP53Q96M91 514 aa17.39■□□□□ 0.37
LSM8-201ENST00000249299 PXDNQ92626 1479 aa17.38■□□□□ 0.37
LSM8-201ENST00000249299 KCNH5Q8NCM2 988 aa17.38■□□□□ 0.37
LSM8-201ENST00000249299 PNISRQ8TF01 805 aaKnown RBP17.38■□□□□ 0.37
LSM8-201ENST00000249299 SMG6Q86US8 1419 aaKnown RBP17.37■□□□□ 0.37
LSM8-201ENST00000249299 PNPLA6Q8IY17 1366 aa17.37■□□□□ 0.37
LSM8-201ENST00000249299 SPATA31A3Q5VYP0 1347 aa17.37■□□□□ 0.37
LSM8-201ENST00000249299 MTHFSP49914 203 aa17.37■□□□□ 0.37
LSM8-201ENST00000249299 USP19O94966 1318 aa17.36■□□□□ 0.37
LSM8-201ENST00000249299 CERKQ8TCT0 537 aa17.36■□□□□ 0.37
LSM8-201ENST00000249299 POLKQ9UBT6 870 aa17.36■□□□□ 0.37
LSM8-201ENST00000249299 TNS3Q68CZ2 1445 aa17.36■□□□□ 0.37
LSM8-201ENST00000249299 TRPM3Q9HCF6 1732 aaPredicted RBP17.35■□□□□ 0.37
LSM8-201ENST00000249299 PIK3C2AO00443 1686 aa17.35■□□□□ 0.37
LSM8-201ENST00000249299 CCDC184Q52MB2 194 aa17.34■□□□□ 0.37
LSM8-201ENST00000249299 ZRANB1Q9UGI0 708 aa17.34■□□□□ 0.37
LSM8-201ENST00000249299 TNNT2P45379 298 aaPredicted RBP17.33■□□□□ 0.36
LSM8-201ENST00000249299 AHDC1Q5TGY3 1603 aaPredicted RBP17.33■□□□□ 0.36
LSM8-201ENST00000249299 LRRC59Q96AG4 307 aaKnown RBP17.32■□□□□ 0.36
LSM8-201ENST00000249299 CDK12Q9NYV4 1490 aaPredicted RBP17.32■□□□□ 0.36
LSM8-201ENST00000249299 SLIT3O75094 1523 aa17.31■□□□□ 0.36
LSM8-201ENST00000249299 NHSL1Q5SYE7 1610 aa17.31■□□□□ 0.36
LSM8-201ENST00000249299 XPCQ01831 940 aaPredicted RBP17.31■□□□□ 0.36
LSM8-201ENST00000249299 ALS2Q96Q42 1657 aa17.31■□□□□ 0.36
LSM8-201ENST00000249299 UBAP1LF5GYI3 381 aa17.3■□□□□ 0.36
LSM8-201ENST00000249299 NUDCQ9Y266 331 aa17.3■□□□□ 0.36
LSM8-201ENST00000249299 MED1Q15648 1581 aaPredicted RBP17.29■□□□□ 0.36
LSM8-201ENST00000249299 RTL1A6NKG5 1358 aa17.29■□□□□ 0.36
LSM8-201ENST00000249299 GCP02774 474 aa17.29■□□□□ 0.36
LSM8-201ENST00000249299 WDR43Q15061 677 aaKnown RBP eCLIP17.28■□□□□ 0.36
LSM8-201ENST00000249299 DDX17Q92841 729 aaKnown RBP17.28■□□□□ 0.36
LSM8-201ENST00000249299 ROBO1Q9Y6N7 1651 aa17.28■□□□□ 0.36
LSM8-201ENST00000249299 FLT4P35916 1363 aa17.27■□□□□ 0.36
LSM8-201ENST00000249299 MAP3K19Q56UN5 1328 aa17.27■□□□□ 0.36
LSM8-201ENST00000249299 NFAT5O94916 1531 aa17.26■□□□□ 0.35
LSM8-201ENST00000249299 DIAPH1O60610 1272 aaKnown RBP17.26■□□□□ 0.35
LSM8-201ENST00000249299 LMOD2Q6P5Q4 547 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms