RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 TMPOP42166 694 aaKnown RBP27.76■■■□□ 2.03
SH2D3A-201ENST00000245908 U2SURPO15042 1029 aaKnown RBP27.75■■■□□ 2.03
SH2D3A-201ENST00000245908 HDGFL2Q7Z4V5 671 aaPredicted RBP27.75■■■□□ 2.03
SH2D3A-201ENST00000245908 DIP2BQ9P265 1576 aa27.75■■■□□ 2.03
SH2D3A-201ENST00000245908 PCDHB15Q9Y5E8 787 aa27.75■■■□□ 2.03
SH2D3A-201ENST00000245908 CDK19Q9BWU1 502 aa27.74■■■□□ 2.03
SH2D3A-201ENST00000245908 PNPLA6Q8IY17 1366 aa27.74■■■□□ 2.03
SH2D3A-201ENST00000245908 DAXXQ9UER7 740 aaPredicted RBP27.74■■■□□ 2.03
SH2D3A-201ENST00000245908 PPP6R1Q9UPN7 881 aa27.74■■■□□ 2.03
SH2D3A-201ENST00000245908 ZMYM3Q14202 1370 aa27.74■■■□□ 2.03
SH2D3A-201ENST00000245908 TRIM35Q9UPQ4 493 aa27.73■■■□□ 2.03
SH2D3A-201ENST00000245908 SETD1AO15047 1707 aaKnown RBP27.73■■■□□ 2.03
SH2D3A-201ENST00000245908 SPATA31D1Q6ZQQ2 1576 aa27.72■■■□□ 2.03
SH2D3A-201ENST00000245908 IL16Q14005 1332 aa27.72■■■□□ 2.03
SH2D3A-201ENST00000245908 CDC42BPGQ6DT37 1551 aa27.72■■■□□ 2.03
SH2D3A-201ENST00000245908 SLC4A3P48751 1232 aa27.71■■■□□ 2.03
SH2D3A-201ENST00000245908 ZKSCAN2Q63HK3 967 aa27.71■■■□□ 2.03
SH2D3A-201ENST00000245908 A2ML1A8K2U0 1454 aa27.71■■■□□ 2.03
SH2D3A-201ENST00000245908 MVPQ14764 893 aaKnown RBP27.7■■■□□ 2.03
SH2D3A-201ENST00000245908 STAG3Q9UJ98 1225 aa27.7■■■□□ 2.03
SH2D3A-201ENST00000245908 TSR2Q969E8 191 aaKnown RBP27.7■■■□□ 2.02
SH2D3A-201ENST00000245908 USP19O94966 1318 aa27.69■■■□□ 2.02
SH2D3A-201ENST00000245908 CYB5RLQ6IPT4 315 aa27.69■■■□□ 2.02
SH2D3A-201ENST00000245908 ATP7BP35670 1465 aa27.68■■■□□ 2.02
SH2D3A-201ENST00000245908 DIAPH1O60610 1272 aaKnown RBP27.68■■■□□ 2.02
SH2D3A-201ENST00000245908 CABP1Q9NZU7 370 aa27.68■■■□□ 2.02
SH2D3A-201ENST00000245908 RIMBP3CA6NJZ7 1639 aa27.68■■■□□ 2.02
SH2D3A-201ENST00000245908 RIMBP3BA6NNM3 1639 aa27.68■■■□□ 2.02
SH2D3A-201ENST00000245908 RIMBP3Q9UFD9 1639 aa27.68■■■□□ 2.02
SH2D3A-201ENST00000245908 FAM69CQ0P6D2 419 aa27.67■■■□□ 2.02
SH2D3A-201ENST00000245908 EXOSC9Q06265 439 aaKnown RBP27.67■■■□□ 2.02
SH2D3A-201ENST00000245908 RWDD1Q9H446 243 aaPredicted RBP27.67■■■□□ 2.02
SH2D3A-201ENST00000245908 DZIP1LQ8IYY4 767 aaKnown RBP27.66■■■□□ 2.02
SH2D3A-201ENST00000245908 PNNQ9H307 717 aaKnown RBP27.66■■■□□ 2.02
SH2D3A-201ENST00000245908 IL27Q8NEV9 243 aa27.66■■■□□ 2.02
SH2D3A-201ENST00000245908 TSPOAP1O95153 1857 aa27.66■■■□□ 2.02
SH2D3A-201ENST00000245908 RIMS2Q9UQ26 1411 aa27.65■■■□□ 2.02
SH2D3A-201ENST00000245908 PDZRN3Q9UPQ7 1066 aa27.64■■■□□ 2.02
SH2D3A-201ENST00000245908 FTSJ3Q8IY81 847 aaKnown RBP27.64■■■□□ 2.01
SH2D3A-201ENST00000245908 SMC4Q9NTJ3 1288 aa27.64■■■□□ 2.01
SH2D3A-201ENST00000245908 LRRC7Q96NW7 1537 aa27.63■■■□□ 2.01
SH2D3A-201ENST00000245908 RIPK4P57078 832 aa27.62■■■□□ 2.01
SH2D3A-201ENST00000245908 SSH1Q8WYL5 1049 aa27.61■■■□□ 2.01
SH2D3A-201ENST00000245908 NFKBIBQ15653 356 aa27.6■■■□□ 2.01
SH2D3A-201ENST00000245908 FCHSD2O94868 740 aa27.6■■■□□ 2.01
SH2D3A-201ENST00000245908 SEC24BO95487 1268 aa27.6■■■□□ 2.01
SH2D3A-201ENST00000245908 TRIM27P14373 513 aa27.59■■■□□ 2.01
SH2D3A-201ENST00000245908 NRXN3Q9Y4C0 1643 aa27.59■■■□□ 2.01
SH2D3A-201ENST00000245908 WAPLQ7Z5K2 1190 aa27.58■■■□□ 2.01
SH2D3A-201ENST00000245908 FAM135BQ49AJ0 1406 aa27.58■■■□□ 2.01
SH2D3A-201ENST00000245908 ATF7IPQ6VMQ6 1270 aa27.57■■■□□ 2
SH2D3A-201ENST00000245908 POLKQ9UBT6 870 aa27.56■■■□□ 2
SH2D3A-201ENST00000245908 MAP2P11137 1827 aaKnown RBP27.56■■■□□ 2
SH2D3A-201ENST00000245908 DDX19BQ9UMR2 479 aa27.56■■■□□ 2
SH2D3A-201ENST00000245908 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.55■■■□□ 2
SH2D3A-201ENST00000245908 RSPH6AQ9H0K4 717 aa27.55■■■□□ 2
SH2D3A-201ENST00000245908 CPSF1Q10570 1443 aaKnown RBP27.54■■■□□ 2
SH2D3A-201ENST00000245908 EDC4Q6P2E9 1401 aaKnown RBP27.53■■■□□ 2
SH2D3A-201ENST00000245908 HDAC1Q13547 482 aaPredicted RBP27.53■■■□□ 2
SH2D3A-201ENST00000245908 NOB1Q9ULX3 412 aaKnown RBP27.52■■■□□ 2
SH2D3A-201ENST00000245908 KIF16BQ96L93 1317 aa27.52■■■□□ 2
SH2D3A-201ENST00000245908 KNDC1Q76NI1 1749 aa27.52■■■□□ 2
SH2D3A-201ENST00000245908 PPIP5K1Q6PFW1 1433 aa27.51■■□□□ 1.99
SH2D3A-201ENST00000245908 PRKAR2BP31323 418 aa27.51■■□□□ 1.99
SH2D3A-201ENST00000245908 ALDH1L2Q3SY69 923 aa27.51■■□□□ 1.99
SH2D3A-201ENST00000245908 ITPRIPQ8IWB1 547 aa27.5■■□□□ 1.99
SH2D3A-201ENST00000245908 WASLO00401 505 aaPredicted RBP27.49■■□□□ 1.99
SH2D3A-201ENST00000245908 IPO8O15397 1037 aaKnown RBP27.48■■□□□ 1.99
SH2D3A-201ENST00000245908 CDK12Q9NYV4 1490 aaPredicted RBP27.48■■□□□ 1.99
SH2D3A-201ENST00000245908 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.48■■□□□ 1.99
SH2D3A-201ENST00000245908 MON2Q7Z3U7 1717 aa27.48■■□□□ 1.99
SH2D3A-201ENST00000245908 BECN1Q14457 450 aa27.47■■□□□ 1.99
SH2D3A-201ENST00000245908 UPF2Q9HAU5 1272 aaKnown RBP27.47■■□□□ 1.99
SH2D3A-201ENST00000245908 FBLN1P23142 703 aa27.47■■□□□ 1.99
SH2D3A-201ENST00000245908 TMEM57Q8N5G2 664 aa27.47■■□□□ 1.99
SH2D3A-201ENST00000245908 TBC1D32Q96NH3 1257 aa27.47■■□□□ 1.99
SH2D3A-201ENST00000245908 METP08581 1390 aa27.47■■□□□ 1.99
SH2D3A-201ENST00000245908 ZNF428Q96B54 188 aa27.46■■□□□ 1.99
SH2D3A-201ENST00000245908 NFE2L2Q16236 605 aa27.46■■□□□ 1.99
SH2D3A-201ENST00000245908 AATKQ6ZMQ8 1374 aa27.45■■□□□ 1.99
SH2D3A-201ENST00000245908 BRPF1P55201 1214 aaPredicted RBP27.45■■□□□ 1.98
SH2D3A-201ENST00000245908 MLECQ14165 292 aa27.45■■□□□ 1.98
SH2D3A-201ENST00000245908 ZBTB40Q9NUA8 1239 aa27.44■■□□□ 1.98
SH2D3A-201ENST00000245908 TECPR2O15040 1411 aa27.44■■□□□ 1.98
SH2D3A-201ENST00000245908 RTN4Q9NQC3 1192 aaKnown RBP27.44■■□□□ 1.98
SH2D3A-201ENST00000245908 SMC5Q8IY18 1101 aa27.43■■□□□ 1.98
SH2D3A-201ENST00000245908 CPS1P31327 1500 aa27.43■■□□□ 1.98
SH2D3A-201ENST00000245908 SIRT1Q96EB6 747 aa27.43■■□□□ 1.98
SH2D3A-201ENST00000245908 AKAP12Q02952 1782 aa27.43■■□□□ 1.98
SH2D3A-201ENST00000245908 IL13P35225 146 aa27.42■■□□□ 1.98
SH2D3A-201ENST00000245908 EMILIN1Q9Y6C2 1016 aa27.42■■□□□ 1.98
SH2D3A-201ENST00000245908 PHACTR3Q96KR7 559 aa27.42■■□□□ 1.98
SH2D3A-201ENST00000245908 CALD1Q05682 793 aaKnown RBP27.41■■□□□ 1.98
SH2D3A-201ENST00000245908 GSE1Q14687 1217 aa27.41■■□□□ 1.98
SH2D3A-201ENST00000245908 NME9Q86XW9 330 aa27.41■■□□□ 1.98
SH2D3A-201ENST00000245908 C3P01024 1663 aa27.4■■□□□ 1.98
SH2D3A-201ENST00000245908 ITSN1Q15811 1721 aa27.4■■□□□ 1.98
SH2D3A-201ENST00000245908 HMOX1P09601 288 aa27.39■■□□□ 1.98
SH2D3A-201ENST00000245908 NUDT16Q96DE0 195 aaKnown RBP27.39■■□□□ 1.98
SH2D3A-201ENST00000245908 FRAT2O75474 233 aaPredicted RBP27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms