RNA–Protein interactions for RNA: ENST00000243077.7

LRP1-201, Transcript of LDL receptor related protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP1, Length 14,897 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-201ENST00000243077 WASF1Q92558 559 aa10.71□□□□□ -0.69
LRP1-201ENST00000243077 EZRP15311 586 aaKnown RBP10.71□□□□□ -0.69
LRP1-201ENST00000243077 CCDC83Q8IWF9 413 aa10.71□□□□□ -0.69
LRP1-201ENST00000243077 FOXD4L1Q9NU39 408 aa10.71□□□□□ -0.69
LRP1-201ENST00000243077 TUBB4AP04350 444 aa10.71□□□□□ -0.7
LRP1-201ENST00000243077 PSME1Q06323 249 aa10.71□□□□□ -0.7
LRP1-201ENST00000243077 NACAP1Q9BZK3 213 aa10.71□□□□□ -0.7
LRP1-201ENST00000243077 CCDC112Q8NEF3 446 aa10.71□□□□□ -0.7
LRP1-201ENST00000243077 DESP17661 470 aa10.7□□□□□ -0.7
LRP1-201ENST00000243077 TSPYL4Q9UJ04 414 aa10.7□□□□□ -0.7
LRP1-201ENST00000243077 IMMTQ16891 758 aaKnown RBP10.7□□□□□ -0.7
LRP1-201ENST00000243077 SENP3Q9H4L4 574 aaPredicted RBP10.7□□□□□ -0.7
LRP1-201ENST00000243077 CCAR1Q8IX12 1150 aaKnown RBP10.7□□□□□ -0.7
LRP1-201ENST00000243077 HSP90AB2PQ58FF8 381 aa10.7□□□□□ -0.7
LRP1-201ENST00000243077 TRIM22Q8IYM9 498 aa10.7□□□□□ -0.7
LRP1-201ENST00000243077 BMP2KQ9NSY1 1161 aaPredicted RBP10.7□□□□□ -0.7
LRP1-201ENST00000243077 VPS37CA5D8V6 355 aaPredicted RBP10.69□□□□□ -0.7
LRP1-201ENST00000243077 ZNF397Q8NF99 534 aaPredicted RBP10.69□□□□□ -0.7
LRP1-201ENST00000243077 CEP131Q9UPN4 1083 aa10.69□□□□□ -0.7
LRP1-201ENST00000243077 CYP46A1Q9Y6A2 500 aa10.69□□□□□ -0.7
LRP1-201ENST00000243077 PLEKHH1Q9ULM0 1364 aa10.69□□□□□ -0.7
LRP1-201ENST00000243077 PTPRGP23470 1445 aa10.69□□□□□ -0.7
LRP1-201ENST00000243077 PLEKHO1Q53GL0 409 aaPredicted RBP10.69□□□□□ -0.7
LRP1-201ENST00000243077 KRT85P78386 507 aa10.69□□□□□ -0.7
LRP1-201ENST00000243077 FOXD4L5Q5VV16 416 aaPredicted RBP10.69□□□□□ -0.7
LRP1-201ENST00000243077 FOXD4L4Q8WXT5 416 aaPredicted RBP10.69□□□□□ -0.7
LRP1-201ENST00000243077 NOL8Q76FK4 1167 aaKnown RBP10.69□□□□□ -0.7
LRP1-201ENST00000243077 POTEB2H3BUK9 544 aa10.69□□□□□ -0.7
LRP1-201ENST00000243077 FGFR1OPO95684 399 aaKnown RBP10.69□□□□□ -0.7
LRP1-201ENST00000243077 MLECQ14165 292 aa10.68□□□□□ -0.7
LRP1-201ENST00000243077 DDX11Q96FC9 970 aa10.68□□□□□ -0.7
LRP1-201ENST00000243077 PYM1Q9BRP8 204 aaKnown RBP10.68□□□□□ -0.7
LRP1-201ENST00000243077 RIC3Q7Z5B4 369 aa10.68□□□□□ -0.7
LRP1-201ENST00000243077 BACH2Q9BYV9 841 aa10.68□□□□□ -0.7
LRP1-201ENST00000243077 GBP2P32456 591 aaPredicted RBP10.68□□□□□ -0.7
LRP1-201ENST00000243077 CECR2Q9BXF3 1484 aa10.68□□□□□ -0.7
LRP1-201ENST00000243077 SYCP1Q15431 976 aa10.67□□□□□ -0.7
LRP1-201ENST00000243077 RAPGEF4Q8WZA2 1011 aa10.67□□□□□ -0.7
LRP1-201ENST00000243077 PLIN1O60240 522 aa10.67□□□□□ -0.7
LRP1-201ENST00000243077 RAB11FIP3O75154 756 aa10.67□□□□□ -0.7
LRP1-201ENST00000243077 AMER1Q5JTC6 1135 aaPredicted RBP10.67□□□□□ -0.7
LRP1-201ENST00000243077 CCDC158Q5M9N0 1113 aa10.67□□□□□ -0.7
LRP1-201ENST00000243077 RRP7AQ9Y3A4 280 aaKnown RBP10.67□□□□□ -0.7
LRP1-201ENST00000243077 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.67□□□□□ -0.7
LRP1-201ENST00000243077 HMGB1P09429 215 aaKnown RBP10.67□□□□□ -0.7
LRP1-201ENST00000243077 NEK4P51957 841 aa10.67□□□□□ -0.7
LRP1-201ENST00000243077 RPGRIP1LQ68CZ1 1315 aa10.67□□□□□ -0.7
LRP1-201ENST00000243077 PHAXQ9H814 394 aaKnown RBP10.67□□□□□ -0.7
LRP1-201ENST00000243077 ARID3AQ99856 593 aa10.67□□□□□ -0.7
LRP1-201ENST00000243077 K7ELQ4 463 aaPredicted RBP10.67□□□□□ -0.7
LRP1-201ENST00000243077 SEPT7Q16181 437 aaKnown RBP10.66□□□□□ -0.7
LRP1-201ENST00000243077 SH2B1Q9NRF2 756 aaPredicted RBP10.66□□□□□ -0.7
LRP1-201ENST00000243077 GOLGA6L9A6NEM1 432 aa10.66□□□□□ -0.7
LRP1-201ENST00000243077 TRIM21P19474 475 aaKnown RBP10.66□□□□□ -0.7
LRP1-201ENST00000243077 KIF18AQ8NI77 898 aa10.66□□□□□ -0.7
LRP1-201ENST00000243077 PPP6R1Q9UPN7 881 aa10.66□□□□□ -0.7
LRP1-201ENST00000243077 MICALCLQ6ZW33 695 aa10.66□□□□□ -0.7
LRP1-201ENST00000243077 ZNF287Q9HBT7 754 aa10.66□□□□□ -0.7
LRP1-201ENST00000243077 NOL7Q9UMY1 257 aaKnown RBP10.66□□□□□ -0.7
LRP1-201ENST00000243077 FYCO1Q9BQS8 1478 aa10.66□□□□□ -0.7
LRP1-201ENST00000243077 CDK5RAP3Q96JB5 506 aa10.66□□□□□ -0.7
LRP1-201ENST00000243077 CEP57L1Q8IYX8 460 aa10.65□□□□□ -0.7
LRP1-201ENST00000243077 LNPKQ9C0E8 428 aa10.65□□□□□ -0.7
LRP1-201ENST00000243077 CETN2P41208 172 aa10.65□□□□□ -0.7
LRP1-201ENST00000243077 DHX29Q7Z478 1369 aaKnown RBP10.65□□□□□ -0.7
LRP1-201ENST00000243077 SLC52A1Q9NWF4 448 aa10.65□□□□□ -0.7
LRP1-201ENST00000243077 SMG6Q86US8 1419 aaKnown RBP10.65□□□□□ -0.7
LRP1-201ENST00000243077 PDILTQ8N807 584 aa10.65□□□□□ -0.7
LRP1-201ENST00000243077 SCAND2PQ9GZW5 306 aaPredicted RBP10.65□□□□□ -0.7
LRP1-201ENST00000243077 GOLGA6L10A0A0M3HER8 536 aa10.65□□□□□ -0.7
LRP1-201ENST00000243077 GRPEL1Q9HAV7 217 aa10.65□□□□□ -0.71
LRP1-201ENST00000243077 ESPNB1AK53 854 aa10.65□□□□□ -0.71
LRP1-201ENST00000243077 MROH2BQ7Z745 1585 aa10.64□□□□□ -0.71
LRP1-201ENST00000243077 TNMDQ9H2S6 317 aa10.64□□□□□ -0.71
LRP1-201ENST00000243077 CCDC196A0A1B0GTZ2 297 aa10.64□□□□□ -0.71
LRP1-201ENST00000243077 SLC26A8Q96RN1 970 aa10.64□□□□□ -0.71
LRP1-201ENST00000243077 GSDMDP57764 484 aa10.64□□□□□ -0.71
LRP1-201ENST00000243077 FEZ1Q99689 392 aa10.64□□□□□ -0.71
LRP1-201ENST00000243077 DDX12PQ92771 950 aa10.64□□□□□ -0.71
LRP1-201ENST00000243077 SURF6O75683 361 aaKnown RBP10.64□□□□□ -0.71
LRP1-201ENST00000243077 CCDC148Q8NFR7 591 aa10.64□□□□□ -0.71
LRP1-201ENST00000243077 PLEKHH2Q8IVE3 1493 aa10.64□□□□□ -0.71
LRP1-201ENST00000243077 ZSCAN30Q86W11 494 aa10.64□□□□□ -0.71
LRP1-201ENST00000243077 SERPINC1P01008 464 aa10.64□□□□□ -0.71
LRP1-201ENST00000243077 RPAP2Q8IXW5 612 aaPredicted RBP10.64□□□□□ -0.71
LRP1-201ENST00000243077 ZSCAN12O43309 604 aa10.63□□□□□ -0.71
LRP1-201ENST00000243077 FCHSD2O94868 740 aa10.63□□□□□ -0.71
LRP1-201ENST00000243077 TUBBP07437 444 aa10.63□□□□□ -0.71
LRP1-201ENST00000243077 BCL2L13Q9BXK5 485 aa10.63□□□□□ -0.71
LRP1-201ENST00000243077 U3KPZ7 1027 aaPredicted RBP10.63□□□□□ -0.71
LRP1-201ENST00000243077 TRHP20396 242 aaPredicted RBP10.63□□□□□ -0.71
LRP1-201ENST00000243077 MCM4P33991 863 aa10.63□□□□□ -0.71
LRP1-201ENST00000243077 CCDC57Q2TAC2 916 aa10.63□□□□□ -0.71
LRP1-201ENST00000243077 LRRCC1Q9C099 1032 aa10.63□□□□□ -0.71
LRP1-201ENST00000243077 NCBP3Q53F19 620 aaKnown RBP10.63□□□□□ -0.71
LRP1-201ENST00000243077 UBXN4Q92575 508 aa10.63□□□□□ -0.71
LRP1-201ENST00000243077 LTV1Q96GA3 475 aaPredicted RBP10.63□□□□□ -0.71
LRP1-201ENST00000243077 CALCOCO1Q9P1Z2 691 aa10.63□□□□□ -0.71
LRP1-201ENST00000243077 EIF2S2P20042 333 aaKnown RBP10.63□□□□□ -0.71
LRP1-201ENST00000243077 PRPF40AO75400 957 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms