RNA–Protein interactions for RNA: ENST00000242994.3

NEUROD4-201, Transcript of neuronal differentiation 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEUROD4, Length 3,953 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4-201ENST00000242994 SEC24BO95487 1268 aa9.07□□□□□ -0.96
NEUROD4-201ENST00000242994 MAP4K4O95819 1239 aaPredicted RBP9.07□□□□□ -0.96
NEUROD4-201ENST00000242994 RBM33Q96EV2 1170 aaKnown RBP9.07□□□□□ -0.96
NEUROD4-201ENST00000242994 EXOC6BQ9Y2D4 811 aa9.07□□□□□ -0.96
NEUROD4-201ENST00000242994 RTEL1-TNFRSF6BF6WH68 1400 aa9.07□□□□□ -0.96
NEUROD4-201ENST00000242994 VPS37CA5D8V6 355 aaPredicted RBP9.06□□□□□ -0.96
NEUROD4-201ENST00000242994 NPHP1O15259 732 aa9.06□□□□□ -0.96
NEUROD4-201ENST00000242994 UBTFL1P0CB47 393 aaPredicted RBP9.06□□□□□ -0.96
NEUROD4-201ENST00000242994 MCM4P33991 863 aa9.06□□□□□ -0.96
NEUROD4-201ENST00000242994 C8orf34Q49A92 452 aa9.06□□□□□ -0.96
NEUROD4-201ENST00000242994 FANCAO15360 1455 aa9.06□□□□□ -0.96
NEUROD4-201ENST00000242994 FOSBP53539 338 aa9.06□□□□□ -0.96
NEUROD4-201ENST00000242994 IL1RAPL2Q9NP60 686 aa9.06□□□□□ -0.96
NEUROD4-201ENST00000242994 FCHSD2O94868 740 aa9.05□□□□□ -0.96
NEUROD4-201ENST00000242994 CHAF1AQ13111 956 aaPredicted RBP9.05□□□□□ -0.96
NEUROD4-201ENST00000242994 SKOR2Q2VWA4 1001 aaPredicted RBP9.05□□□□□ -0.96
NEUROD4-201ENST00000242994 F6X3S4 739 aa9.05□□□□□ -0.96
NEUROD4-201ENST00000242994 NFE2L2Q16236 605 aa9.05□□□□□ -0.96
NEUROD4-201ENST00000242994 CD109Q6YHK3 1445 aa9.05□□□□□ -0.96
NEUROD4-201ENST00000242994 GCC1Q96CN9 775 aa9.05□□□□□ -0.96
NEUROD4-201ENST00000242994 NUDT16Q96DE0 195 aaKnown RBP9.05□□□□□ -0.96
NEUROD4-201ENST00000242994 DNMT1P26358 1616 aaKnown RBP9.05□□□□□ -0.96
NEUROD4-201ENST00000242994 SPATA31E1Q6ZUB1 1445 aa9.05□□□□□ -0.96
NEUROD4-201ENST00000242994 TULP1O00294 542 aaPredicted RBP9.05□□□□□ -0.96
NEUROD4-201ENST00000242994 PRPF40AO75400 957 aaKnown RBP9.05□□□□□ -0.96
NEUROD4-201ENST00000242994 IFIT2P09913 472 aaKnown RBP9.05□□□□□ -0.96
NEUROD4-201ENST00000242994 GNL2Q13823 731 aaKnown RBP9.05□□□□□ -0.96
NEUROD4-201ENST00000242994 TAF7LQ5H9L4 462 aa9.05□□□□□ -0.96
NEUROD4-201ENST00000242994 ATAD2Q6PL18 1390 aa9.05□□□□□ -0.96
NEUROD4-201ENST00000242994 CCDC27Q2M243 656 aa9.05□□□□□ -0.96
NEUROD4-201ENST00000242994 CCDC61Q9Y6R9 512 aa9.05□□□□□ -0.96
NEUROD4-201ENST00000242994 C14orf93Q9H972 538 aaKnown RBP9.04□□□□□ -0.96
NEUROD4-201ENST00000242994 NASPP49321 788 aaPredicted RBP9.04□□□□□ -0.96
NEUROD4-201ENST00000242994 XPCQ01831 940 aaPredicted RBP9.04□□□□□ -0.96
NEUROD4-201ENST00000242994 HDGFL1Q5TGJ6 251 aa9.04□□□□□ -0.96
NEUROD4-201ENST00000242994 BCL11BQ9C0K0 894 aaPredicted RBP9.04□□□□□ -0.96
NEUROD4-201ENST00000242994 SAMD9Q5K651 1589 aa9.04□□□□□ -0.96
NEUROD4-201ENST00000242994 ITSN2Q9NZM3 1697 aa9.03□□□□□ -0.96
NEUROD4-201ENST00000242994 A2MP01023 1474 aa9.03□□□□□ -0.96
NEUROD4-201ENST00000242994 MRE11P49959 708 aa9.03□□□□□ -0.96
NEUROD4-201ENST00000242994 NUCB2P80303 420 aa9.03□□□□□ -0.96
NEUROD4-201ENST00000242994 HSP90AA2PQ14568 343 aaPredicted RBP9.03□□□□□ -0.96
NEUROD4-201ENST00000242994 RSPH6AQ9H0K4 717 aa9.03□□□□□ -0.96
NEUROD4-201ENST00000242994 RPGRIP1LQ68CZ1 1315 aa9.03□□□□□ -0.96
NEUROD4-201ENST00000242994 NINLQ9Y2I6 1382 aa9.03□□□□□ -0.96
NEUROD4-201ENST00000242994 TSHZ3Q63HK5 1081 aa9.03□□□□□ -0.96
NEUROD4-201ENST00000242994 ZRANB1Q9UGI0 708 aa9.03□□□□□ -0.96
NEUROD4-201ENST00000242994 CFAP65Q6ZU64 1925 aaKnown RBP9.03□□□□□ -0.96
NEUROD4-201ENST00000242994 K7ELQ4 463 aaPredicted RBP9.03□□□□□ -0.96
NEUROD4-201ENST00000242994 FYB1O15117 783 aa9.03□□□□□ -0.96
NEUROD4-201ENST00000242994 UPF3BQ9BZI7 483 aaKnown RBP9.02□□□□□ -0.97
NEUROD4-201ENST00000242994 KDM5BQ9UGL1 1544 aa9.02□□□□□ -0.97
NEUROD4-201ENST00000242994 CT47B1P0C2W7 299 aaPredicted RBP9.02□□□□□ -0.97
NEUROD4-201ENST00000242994 USHBP1Q8N6Y0 703 aa9.02□□□□□ -0.97
NEUROD4-201ENST00000242994 FBXW7Q969H0 707 aa9.02□□□□□ -0.97
NEUROD4-201ENST00000242994 TOMM22Q9NS69 142 aa9.02□□□□□ -0.97
NEUROD4-201ENST00000242994 NLRP2Q9NX02 1062 aa9.02□□□□□ -0.97
NEUROD4-201ENST00000242994 ABCA5Q8WWZ7 1642 aa9.02□□□□□ -0.97
NEUROD4-201ENST00000242994 NEXNQ0ZGT2 675 aa9.02□□□□□ -0.97
NEUROD4-201ENST00000242994 ASXL1Q8IXJ9 1541 aa9.02□□□□□ -0.97
NEUROD4-201ENST00000242994 GNAI2P04899 355 aa9.01□□□□□ -0.97
NEUROD4-201ENST00000242994 ZKSCAN1P17029 563 aaPredicted RBP9.01□□□□□ -0.97
NEUROD4-201ENST00000242994 ESCO1Q5FWF5 840 aa9.01□□□□□ -0.97
NEUROD4-201ENST00000242994 FAM13BQ9NYF5 915 aa9.01□□□□□ -0.97
NEUROD4-201ENST00000242994 PLCH2O75038 1416 aa9.01□□□□□ -0.97
NEUROD4-201ENST00000242994 H3BQV1 296 aa9.01□□□□□ -0.97
NEUROD4-201ENST00000242994 CEBPAP49715 358 aaPredicted RBP9.01□□□□□ -0.97
NEUROD4-201ENST00000242994 IFFO2Q5TF58 517 aa9.01□□□□□ -0.97
NEUROD4-201ENST00000242994 FAM43AQ8N2R8 423 aa9.01□□□□□ -0.97
NEUROD4-201ENST00000242994 CHMP4AQ9BY43 222 aa9.01□□□□□ -0.97
NEUROD4-201ENST00000242994 SIL1Q9H173 461 aa9.01□□□□□ -0.97
NEUROD4-201ENST00000242994 SMC3Q9UQE7 1217 aa9.01□□□□□ -0.97
NEUROD4-201ENST00000242994 NCKAP5LQ9HCH0 1330 aa9.01□□□□□ -0.97
NEUROD4-201ENST00000242994 G3BP1Q13283 466 aaKnown RBP eCLIP9.01□□□□□ -0.97
NEUROD4-201ENST00000242994 CCDC30Q5VVM6 783 aa9.01□□□□□ -0.97
NEUROD4-201ENST00000242994 TTC5Q8N0Z6 440 aa9.01□□□□□ -0.97
NEUROD4-201ENST00000242994 EIF4G3O43432 1585 aaKnown RBP9□□□□□ -0.97
NEUROD4-201ENST00000242994 FIBPO43427 364 aa9□□□□□ -0.97
NEUROD4-201ENST00000242994 GNAI3P08754 354 aa9□□□□□ -0.97
NEUROD4-201ENST00000242994 KRT24Q2M2I5 525 aa9□□□□□ -0.97
NEUROD4-201ENST00000242994 DDX54Q8TDD1 881 aaKnown RBP9□□□□□ -0.97
NEUROD4-201ENST00000242994 RABEP1Q15276 862 aa9□□□□□ -0.97
NEUROD4-201ENST00000242994 RIC3Q7Z5B4 369 aa9□□□□□ -0.97
NEUROD4-201ENST00000242994 FAM184AQ8NB25 1140 aa9□□□□□ -0.97
NEUROD4-201ENST00000242994 TBC1D32Q96NH3 1257 aa9□□□□□ -0.97
NEUROD4-201ENST00000242994 RBM42Q9BTD8 480 aaKnown RBP9□□□□□ -0.97
NEUROD4-201ENST00000242994 HDAC5Q9UQL6 1122 aa9□□□□□ -0.97
NEUROD4-201ENST00000242994 COL17A1Q9UMD9 1497 aaPredicted RBP9□□□□□ -0.97
NEUROD4-201ENST00000242994 PHF14O94880 888 aa9□□□□□ -0.97
NEUROD4-201ENST00000242994 TSPYL6Q8N831 410 aa9□□□□□ -0.97
NEUROD4-201ENST00000242994 GAS2L2Q8NHY3 880 aa9□□□□□ -0.97
NEUROD4-201ENST00000242994 GRPEL1Q9HAV7 217 aa9□□□□□ -0.97
NEUROD4-201ENST00000242994 MBIPQ9NS73 344 aa9□□□□□ -0.97
NEUROD4-201ENST00000242994 RNF123Q5XPI4 1314 aa8.99□□□□□ -0.97
NEUROD4-201ENST00000242994 CLASRPQ8N2M8 674 aaKnown RBP8.99□□□□□ -0.97
NEUROD4-201ENST00000242994 LARP6Q9BRS8 491 aaKnown RBP8.99□□□□□ -0.97
NEUROD4-201ENST00000242994 SF3A1Q15459 793 aaKnown RBP8.99□□□□□ -0.97
NEUROD4-201ENST00000242994 VSIG10Q8N0Z9 540 aa8.99□□□□□ -0.97
NEUROD4-201ENST00000242994 RUFY2Q8WXA3 655 aa8.99□□□□□ -0.97
NEUROD4-201ENST00000242994 NEUROD6Q96NK8 337 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms