RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 SLC52A1Q9NWF4 448 aa21.5■■□□□ 1.03
SSPN-201ENST00000242729 DIAPH1O60610 1272 aaKnown RBP21.5■■□□□ 1.03
SSPN-201ENST00000242729 ARHGEF28Q8N1W1 1705 aaKnown RBP21.5■■□□□ 1.03
SSPN-201ENST00000242729 FAM69CQ0P6D2 419 aa21.49■■□□□ 1.03
SSPN-201ENST00000242729 CCDC27Q2M243 656 aa21.49■■□□□ 1.03
SSPN-201ENST00000242729 RWDD1Q9H446 243 aaPredicted RBP21.48■■□□□ 1.03
SSPN-201ENST00000242729 HDGFL2Q7Z4V5 671 aaPredicted RBP21.48■■□□□ 1.03
SSPN-201ENST00000242729 BRPF3Q9ULD4 1205 aa21.48■■□□□ 1.03
SSPN-201ENST00000242729 DIP2CQ9Y2E4 1556 aa21.48■■□□□ 1.03
SSPN-201ENST00000242729 MYO5BQ9ULV0 1848 aa21.48■■□□□ 1.03
SSPN-201ENST00000242729 ABCC11Q96J66 1382 aa21.48■■□□□ 1.03
SSPN-201ENST00000242729 PRKAR2BP31323 418 aa21.47■■□□□ 1.03
SSPN-201ENST00000242729 PIK3C2BO00750 1634 aa21.47■■□□□ 1.03
SSPN-201ENST00000242729 TMEM57Q8N5G2 664 aa21.47■■□□□ 1.03
SSPN-201ENST00000242729 NUTM2FA1L443 756 aa21.46■■□□□ 1.03
SSPN-201ENST00000242729 GSE1Q14687 1217 aa21.46■■□□□ 1.03
SSPN-201ENST00000242729 PHACTR3Q96KR7 559 aa21.46■■□□□ 1.03
SSPN-201ENST00000242729 EMILIN1Q9Y6C2 1016 aa21.46■■□□□ 1.03
SSPN-201ENST00000242729 YTHDC2Q9H6S0 1430 aaKnown RBP21.46■■□□□ 1.03
SSPN-201ENST00000242729 MFAP1P55081 439 aaKnown RBP21.45■■□□□ 1.02
SSPN-201ENST00000242729 ARXQ96QS3 562 aa21.44■■□□□ 1.02
SSPN-201ENST00000242729 NINLQ9Y2I6 1382 aa21.44■■□□□ 1.02
SSPN-201ENST00000242729 C1orf115Q9H7X2 142 aa21.44■■□□□ 1.02
SSPN-201ENST00000242729 PLPPR3Q6T4P5 718 aa21.42■■□□□ 1.02
SSPN-201ENST00000242729 ATF7IPQ6VMQ6 1270 aa21.42■■□□□ 1.02
SSPN-201ENST00000242729 TXNDC2Q86VQ3 553 aa21.42■■□□□ 1.02
SSPN-201ENST00000242729 NME9Q86XW9 330 aa21.42■■□□□ 1.02
SSPN-201ENST00000242729 PTPRMP28827 1452 aa21.42■■□□□ 1.02
SSPN-201ENST00000242729 NSD2O96028 1365 aa21.42■■□□□ 1.02
SSPN-201ENST00000242729 CFAP74Q9C0B2 1584 aa21.41■■□□□ 1.02
SSPN-201ENST00000242729 RRS1Q15050 365 aaKnown RBP21.41■■□□□ 1.02
SSPN-201ENST00000242729 CD163L1Q9NR16 1453 aa21.41■■□□□ 1.02
SSPN-201ENST00000242729 SOX12O15370 315 aa21.41■■□□□ 1.02
SSPN-201ENST00000242729 POLKQ9UBT6 870 aa21.41■■□□□ 1.02
SSPN-201ENST00000242729 UPF2Q9HAU5 1272 aaKnown RBP21.4■■□□□ 1.02
SSPN-201ENST00000242729 ATAD2Q6PL18 1390 aa21.4■■□□□ 1.02
SSPN-201ENST00000242729 TSPYL6Q8N831 410 aa21.39■■□□□ 1.02
SSPN-201ENST00000242729 NEO1Q92859 1461 aa21.39■■□□□ 1.01
SSPN-201ENST00000242729 LNPKQ9C0E8 428 aa21.39■■□□□ 1.01
SSPN-201ENST00000242729 DCTN1Q14203 1278 aa21.38■■□□□ 1.01
SSPN-201ENST00000242729 FAM83GA6ND36 823 aa21.37■■□□□ 1.01
SSPN-201ENST00000242729 PUS7Q96PZ0 661 aaKnown RBP21.37■■□□□ 1.01
SSPN-201ENST00000242729 TBC1D2Q9BYX2 928 aa21.36■■□□□ 1.01
SSPN-201ENST00000242729 BECN1Q14457 450 aa21.35■■□□□ 1.01
SSPN-201ENST00000242729 DDX19BQ9UMR2 479 aa21.35■■□□□ 1.01
SSPN-201ENST00000242729 COL3A1P02461 1466 aaPredicted RBP21.34■■□□□ 1.01
SSPN-201ENST00000242729 TBC1D32Q96NH3 1257 aa21.34■■□□□ 1.01
SSPN-201ENST00000242729 RSPH6AQ9H0K4 717 aa21.34■■□□□ 1.01
SSPN-201ENST00000242729 USP32Q8NFA0 1604 aa21.34■■□□□ 1.01
SSPN-201ENST00000242729 ARHGAP31Q2M1Z3 1444 aa21.34■■□□□ 1.01
SSPN-201ENST00000242729 TMEM131LA2VDJ0 1609 aa21.33■■□□□ 1.01
SSPN-201ENST00000242729 NLRP1Q9C000 1473 aa21.33■■□□□ 1
SSPN-201ENST00000242729 TSPOAP1O95153 1857 aa21.31■■□□□ 1
SSPN-201ENST00000242729 RICTORQ6R327 1708 aa21.31■■□□□ 1
SSPN-201ENST00000242729 ALKQ9UM73 1620 aa21.31■■□□□ 1
SSPN-201ENST00000242729 PREX1Q8TCU6 1659 aa21.31■■□□□ 1
SSPN-201ENST00000242729 ZBTB40Q9NUA8 1239 aa21.31■■□□□ 1
SSPN-201ENST00000242729 FCHSD2O94868 740 aa21.3■■□□□ 1
SSPN-201ENST00000242729 ADGRB2O60241 1585 aa21.3■■□□□ 1
SSPN-201ENST00000242729 C22orf23Q9BZE7 217 aa21.3■■□□□ 1
SSPN-201ENST00000242729 ZFYVE9O95405 1425 aa21.28■■□□□ 1
SSPN-201ENST00000242729 KRT24Q2M2I5 525 aa21.28■■□□□ 1
SSPN-201ENST00000242729 ARHGEF40Q8TER5 1519 aa21.27■■□□□ 1
SSPN-201ENST00000242729 ANKRD45Q5TZF3 282 aa21.27■■□□□ 1
SSPN-201ENST00000242729 MBIPQ9NS73 344 aa21.27■■□□□ 1
SSPN-201ENST00000242729 GZF1Q9H116 711 aaPredicted RBP21.27■■□□□ 1
SSPN-201ENST00000242729 METP08581 1390 aa21.27■■□□□ 1
SSPN-201ENST00000242729 IPO8O15397 1037 aaKnown RBP21.26■□□□□ 0.99
SSPN-201ENST00000242729 AEBP1Q8IUX7 1158 aa21.26■□□□□ 0.99
SSPN-201ENST00000242729 LRRC7Q96NW7 1537 aa21.26■□□□□ 0.99
SSPN-201ENST00000242729 NFE2L2Q16236 605 aa21.26■□□□□ 0.99
SSPN-201ENST00000242729 C8orf58Q8NAV2 365 aa21.26■□□□□ 0.99
SSPN-201ENST00000242729 NUDT16Q96DE0 195 aaKnown RBP21.26■□□□□ 0.99
SSPN-201ENST00000242729 WASLO00401 505 aaPredicted RBP21.25■□□□□ 0.99
SSPN-201ENST00000242729 CT47B1P0C2W7 299 aaPredicted RBP21.25■□□□□ 0.99
SSPN-201ENST00000242729 HDAC1Q13547 482 aaPredicted RBP21.25■□□□□ 0.99
SSPN-201ENST00000242729 AAMPQ13685 434 aa21.25■□□□□ 0.99
SSPN-201ENST00000242729 ESF1Q9H501 851 aaKnown RBP21.25■□□□□ 0.99
SSPN-201ENST00000242729 KIF16BQ96L93 1317 aa21.25■□□□□ 0.99
SSPN-201ENST00000242729 VAMP4O75379 141 aa21.25■□□□□ 0.99
SSPN-201ENST00000242729 RIMS2Q9UQ26 1411 aa21.25■□□□□ 0.99
SSPN-201ENST00000242729 PPIP5K1Q6PFW1 1433 aa21.24■□□□□ 0.99
SSPN-201ENST00000242729 PNPLA6Q8IY17 1366 aa21.24■□□□□ 0.99
SSPN-201ENST00000242729 FOXD4L1Q9NU39 408 aa21.24■□□□□ 0.99
SSPN-201ENST00000242729 IL13P35225 146 aa21.23■□□□□ 0.99
SSPN-201ENST00000242729 PNNQ9H307 717 aaKnown RBP21.23■□□□□ 0.99
SSPN-201ENST00000242729 ANTXR1Q9H6X2 564 aa21.23■□□□□ 0.99
SSPN-201ENST00000242729 APBB1O00213 710 aa21.23■□□□□ 0.99
SSPN-201ENST00000242729 COG3Q96JB2 828 aa21.23■□□□□ 0.99
SSPN-201ENST00000242729 SMC5Q8IY18 1101 aa21.22■□□□□ 0.99
SSPN-201ENST00000242729 IL16Q14005 1332 aa21.22■□□□□ 0.99
SSPN-201ENST00000242729 TWISTNBQ3B726 338 aaPredicted RBP21.21■□□□□ 0.99
SSPN-201ENST00000242729 VIRMAQ69YN4 1812 aaKnown RBP21.21■□□□□ 0.99
SSPN-201ENST00000242729 CHD1LQ86WJ1 897 aa21.2■□□□□ 0.98
SSPN-201ENST00000242729 MRPL50Q8N5N7 158 aaKnown RBP21.2■□□□□ 0.98
SSPN-201ENST00000242729 MIS18AQ9NYP9 233 aa21.2■□□□□ 0.98
SSPN-201ENST00000242729 A2ML1A8K2U0 1454 aa21.2■□□□□ 0.98
SSPN-201ENST00000242729 ZBTB7BO15156 539 aaPredicted RBP21.19■□□□□ 0.98
SSPN-201ENST00000242729 NUCB1Q02818 461 aa21.19■□□□□ 0.98
SSPN-201ENST00000242729 MCM10Q7L590 875 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms