RNA–Protein interactions for RNA: ENST00000241001.13

PAX6-201, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-201ENST00000241001 PDE3AQ14432 1141 aa16.55■□□□□ 0.24
PAX6-201ENST00000241001 CENPQQ7L2Z9 268 aaPredicted RBP16.55■□□□□ 0.24
PAX6-201ENST00000241001 CABP1Q9NZU7 370 aa16.55■□□□□ 0.24
PAX6-201ENST00000241001 KDM2BQ8NHM5 1336 aa16.54■□□□□ 0.24
PAX6-201ENST00000241001 SLIT1O75093 1534 aa16.54■□□□□ 0.24
PAX6-201ENST00000241001 C20orf194Q5TEA3 1177 aa16.54■□□□□ 0.24
PAX6-201ENST00000241001 MYH16Q9H6N6 1097 aa16.54■□□□□ 0.24
PAX6-201ENST00000241001 C3P01024 1663 aa16.54■□□□□ 0.24
PAX6-201ENST00000241001 PPIP5K1Q6PFW1 1433 aa16.54■□□□□ 0.24
PAX6-201ENST00000241001 TOPAZ1Q8N9V7 1692 aa16.54■□□□□ 0.24
PAX6-201ENST00000241001 CT47B1P0C2W7 299 aaPredicted RBP16.53■□□□□ 0.24
PAX6-201ENST00000241001 AAMPQ13685 434 aa16.53■□□□□ 0.24
PAX6-201ENST00000241001 DMRT2Q9Y5R5 561 aa16.53■□□□□ 0.24
PAX6-201ENST00000241001 ADAMTS13Q76LX8 1427 aa16.53■□□□□ 0.24
PAX6-201ENST00000241001 WAPLQ7Z5K2 1190 aa16.53■□□□□ 0.24
PAX6-201ENST00000241001 DIP2AQ14689 1571 aa16.53■□□□□ 0.24
PAX6-201ENST00000241001 CDK12Q9NYV4 1490 aaPredicted RBP16.52■□□□□ 0.23
PAX6-201ENST00000241001 ARHGAP23Q9P227 1491 aa16.52■□□□□ 0.23
PAX6-201ENST00000241001 PLEKHF1Q96S99 279 aa16.51■□□□□ 0.23
PAX6-201ENST00000241001 AATKQ6ZMQ8 1374 aa16.51■□□□□ 0.23
PAX6-201ENST00000241001 IL16Q14005 1332 aa16.51■□□□□ 0.23
PAX6-201ENST00000241001 DIAPH1O60610 1272 aaKnown RBP16.5■□□□□ 0.23
PAX6-201ENST00000241001 LMTK3Q96Q04 1460 aa16.5■□□□□ 0.23
PAX6-201ENST00000241001 MAPK8IP3Q9UPT6 1336 aa16.5■□□□□ 0.23
PAX6-201ENST00000241001 SENP3Q9H4L4 574 aaPredicted RBP16.5■□□□□ 0.23
PAX6-201ENST00000241001 NRKQ7Z2Y5 1582 aa16.5■□□□□ 0.23
PAX6-201ENST00000241001 MAP2P11137 1827 aaKnown RBP16.49■□□□□ 0.23
PAX6-201ENST00000241001 RRP7AQ9Y3A4 280 aaKnown RBP16.48■□□□□ 0.23
PAX6-201ENST00000241001 CCDC61Q9Y6R9 512 aa16.48■□□□□ 0.23
PAX6-201ENST00000241001 LRRC7Q96NW7 1537 aa16.48■□□□□ 0.23
PAX6-201ENST00000241001 MSH5O43196 834 aa16.48■□□□□ 0.23
PAX6-201ENST00000241001 ANP32AP39687 249 aaKnown RBP16.48■□□□□ 0.23
PAX6-201ENST00000241001 HSPA2P54652 639 aa16.48■□□□□ 0.23
PAX6-201ENST00000241001 U2SURPO15042 1029 aaKnown RBP16.47■□□□□ 0.23
PAX6-201ENST00000241001 BCAR3O75815 825 aa16.47■□□□□ 0.23
PAX6-201ENST00000241001 RARSP54136 660 aaKnown RBP16.47■□□□□ 0.23
PAX6-201ENST00000241001 NUDT16Q96DE0 195 aaKnown RBP16.47■□□□□ 0.23
PAX6-201ENST00000241001 FCHSD2O94868 740 aa16.46■□□□□ 0.23
PAX6-201ENST00000241001 TMPOP42166 694 aaKnown RBP16.46■□□□□ 0.23
PAX6-201ENST00000241001 PTCH1Q13635 1447 aa16.46■□□□□ 0.23
PAX6-201ENST00000241001 NEUROD2Q15784 382 aa16.46■□□□□ 0.23
PAX6-201ENST00000241001 TXNDC2Q86VQ3 553 aa16.46■□□□□ 0.23
PAX6-201ENST00000241001 ZNF692Q9BU19 519 aaPredicted RBP16.46■□□□□ 0.23
PAX6-201ENST00000241001 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.46■□□□□ 0.23
PAX6-201ENST00000241001 ROBO2Q9HCK4 1378 aa16.45■□□□□ 0.22
PAX6-201ENST00000241001 CANXP27824 592 aaKnown RBP16.45■□□□□ 0.22
PAX6-201ENST00000241001 BACH2Q9BYV9 841 aa16.44■□□□□ 0.22
PAX6-201ENST00000241001 EID1Q9Y6B2 187 aa16.44■□□□□ 0.22
PAX6-201ENST00000241001 NALCNQ8IZF0 1738 aa16.43■□□□□ 0.22
PAX6-201ENST00000241001 PDE4AP27815 886 aa16.43■□□□□ 0.22
PAX6-201ENST00000241001 ERICH6Q7L0X2 663 aa16.43■□□□□ 0.22
PAX6-201ENST00000241001 POLKQ9UBT6 870 aa16.43■□□□□ 0.22
PAX6-201ENST00000241001 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.42■□□□□ 0.22
PAX6-201ENST00000241001 NEFMP07197 916 aa16.42■□□□□ 0.22
PAX6-201ENST00000241001 TRIM35Q9UPQ4 493 aa16.42■□□□□ 0.22
PAX6-201ENST00000241001 XRN1Q8IZH2 1706 aaKnown RBP16.41■□□□□ 0.22
PAX6-201ENST00000241001 COG3Q96JB2 828 aa16.41■□□□□ 0.22
PAX6-201ENST00000241001 CLUAP1Q96AJ1 413 aa16.4■□□□□ 0.22
PAX6-201ENST00000241001 RSPH6AQ9H0K4 717 aa16.4■□□□□ 0.22
PAX6-201ENST00000241001 TBX22Q9Y458 520 aa16.4■□□□□ 0.22
PAX6-201ENST00000241001 PRR36Q9H6K5 1346 aa16.39■□□□□ 0.21
PAX6-201ENST00000241001 LTKP29376 864 aa16.39■□□□□ 0.21
PAX6-201ENST00000241001 PLEKHG3A1L390 1219 aa16.39■□□□□ 0.21
PAX6-201ENST00000241001 CALD1Q05682 793 aaKnown RBP16.39■□□□□ 0.21
PAX6-201ENST00000241001 IPO9Q96P70 1041 aaKnown RBP16.39■□□□□ 0.21
PAX6-201ENST00000241001 PTPRUQ92729 1446 aa16.38■□□□□ 0.21
PAX6-201ENST00000241001 NME9Q86XW9 330 aa16.38■□□□□ 0.21
PAX6-201ENST00000241001 OVOS2A0A0J9YW53 1432 aa16.37■□□□□ 0.21
PAX6-201ENST00000241001 OVOS2Q6IE36 1432 aa16.37■□□□□ 0.21
PAX6-201ENST00000241001 VIRMAQ69YN4 1812 aaKnown RBP16.37■□□□□ 0.21
PAX6-201ENST00000241001 RIPK4P57078 832 aa16.37■□□□□ 0.21
PAX6-201ENST00000241001 THEMISQ8N1K5 641 aaPredicted RBP16.37■□□□□ 0.21
PAX6-201ENST00000241001 ZNF428Q96B54 188 aa16.37■□□□□ 0.21
PAX6-201ENST00000241001 NOP58Q9Y2X3 529 aaKnown RBP16.37■□□□□ 0.21
PAX6-201ENST00000241001 USP6P35125 1406 aa16.37■□□□□ 0.21
PAX6-201ENST00000241001 PIK3R4Q99570 1358 aa16.37■□□□□ 0.21
PAX6-201ENST00000241001 IL13P35225 146 aa16.36■□□□□ 0.21
PAX6-201ENST00000241001 ZKSCAN2Q63HK3 967 aa16.36■□□□□ 0.21
PAX6-201ENST00000241001 PMFBP1Q8TBY8 1022 aa16.36■□□□□ 0.21
PAX6-201ENST00000241001 CEP170BQ9Y4F5 1589 aaPredicted RBP16.35■□□□□ 0.21
PAX6-201ENST00000241001 NFE2L2Q16236 605 aa16.35■□□□□ 0.21
PAX6-201ENST00000241001 PANK1Q8TE04 598 aa16.35■□□□□ 0.21
PAX6-201ENST00000241001 FRAT1Q92837 279 aaPredicted RBP16.35■□□□□ 0.21
PAX6-201ENST00000241001 ZNF142P52746 1687 aaPredicted RBP16.34■□□□□ 0.21
PAX6-201ENST00000241001 PRKAR2BP31323 418 aa16.34■□□□□ 0.21
PAX6-201ENST00000241001 LMOD3Q0VAK6 560 aa16.34■□□□□ 0.21
PAX6-201ENST00000241001 COG6Q9Y2V7 657 aa16.34■□□□□ 0.21
PAX6-201ENST00000241001 SSH2Q76I76 1423 aa16.34■□□□□ 0.21
PAX6-201ENST00000241001 USP31Q70CQ4 1352 aa16.34■□□□□ 0.21
PAX6-201ENST00000241001 TTC21BQ7Z4L5 1316 aa16.34■□□□□ 0.21
PAX6-201ENST00000241001 ANKARQ7Z5J8 1434 aa16.33■□□□□ 0.21
PAX6-201ENST00000241001 TTC21AQ8NDW8 1320 aa16.33■□□□□ 0.2
PAX6-201ENST00000241001 KIF16BQ96L93 1317 aa16.33■□□□□ 0.2
PAX6-201ENST00000241001 EXOSC9Q06265 439 aaKnown RBP16.33■□□□□ 0.2
PAX6-201ENST00000241001 ALDH1L2Q3SY69 923 aa16.33■□□□□ 0.2
PAX6-201ENST00000241001 EMILIN1Q9Y6C2 1016 aa16.33■□□□□ 0.2
PAX6-201ENST00000241001 USP54Q70EL1 1684 aa16.33■□□□□ 0.2
PAX6-201ENST00000241001 DLG5Q8TDM6 1919 aa16.32■□□□□ 0.2
PAX6-201ENST00000241001 MVPQ14764 893 aaKnown RBP16.32■□□□□ 0.2
PAX6-201ENST00000241001 FAM161AQ3B820 660 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms