RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 SPATA31A3Q5VYP0 1347 aa13.97□□□□□ -0.17
HMGCL-201ENST00000235958 AKAP12Q02952 1782 aa13.97□□□□□ -0.17
HMGCL-201ENST00000235958 KNSTRNQ9Y448 316 aa13.97□□□□□ -0.17
HMGCL-201ENST00000235958 PXDNQ92626 1479 aa13.97□□□□□ -0.17
HMGCL-201ENST00000235958 SSH2Q76I76 1423 aa13.97□□□□□ -0.17
HMGCL-201ENST00000235958 SBNO1A3KN83 1393 aa13.96□□□□□ -0.17
HMGCL-201ENST00000235958 BRD4O60885 1362 aaPredicted RBP13.96□□□□□ -0.17
HMGCL-201ENST00000235958 FYB1O15117 783 aa13.96□□□□□ -0.17
HMGCL-201ENST00000235958 NUTM2GQ5VZR2 741 aa13.96□□□□□ -0.17
HMGCL-201ENST00000235958 NHSL1Q5SYE7 1610 aa13.96□□□□□ -0.17
HMGCL-201ENST00000235958 TTC21AQ8NDW8 1320 aa13.95□□□□□ -0.18
HMGCL-201ENST00000235958 AHDC1Q5TGY3 1603 aaPredicted RBP13.95□□□□□ -0.18
HMGCL-201ENST00000235958 NLRP6P59044 892 aa13.95□□□□□ -0.18
HMGCL-201ENST00000235958 NME9Q86XW9 330 aa13.95□□□□□ -0.18
HMGCL-201ENST00000235958 ZRANB1Q9UGI0 708 aa13.95□□□□□ -0.18
HMGCL-201ENST00000235958 EDC4Q6P2E9 1401 aaKnown RBP13.95□□□□□ -0.18
HMGCL-201ENST00000235958 PHLPP1O60346 1717 aa13.95□□□□□ -0.18
HMGCL-201ENST00000235958 CGNL1Q0VF96 1302 aa13.93□□□□□ -0.18
HMGCL-201ENST00000235958 NSD3Q9BZ95 1437 aa13.93□□□□□ -0.18
HMGCL-201ENST00000235958 PLEKHG5O94827 1062 aa13.93□□□□□ -0.18
HMGCL-201ENST00000235958 NLRP13Q86W25 1043 aa13.93□□□□□ -0.18
HMGCL-201ENST00000235958 AMER1Q5JTC6 1135 aaPredicted RBP13.92□□□□□ -0.18
HMGCL-201ENST00000235958 CABLES1Q8TDN4 633 aa13.92□□□□□ -0.18
HMGCL-201ENST00000235958 GGNBP2Q9H3C7 697 aa13.92□□□□□ -0.18
HMGCL-201ENST00000235958 MON2Q7Z3U7 1717 aa13.92□□□□□ -0.18
HMGCL-201ENST00000235958 TRPM3Q9HCF6 1732 aaPredicted RBP13.91□□□□□ -0.18
HMGCL-201ENST00000235958 CNGB1Q14028 1251 aaPredicted RBP13.91□□□□□ -0.18
HMGCL-201ENST00000235958 TNS3Q68CZ2 1445 aa13.9□□□□□ -0.18
HMGCL-201ENST00000235958 COG3Q96JB2 828 aa13.9□□□□□ -0.18
HMGCL-201ENST00000235958 ARHGEF10O15013 1369 aa13.9□□□□□ -0.18
HMGCL-201ENST00000235958 COL16A1Q07092 1604 aaPredicted RBP13.9□□□□□ -0.19
HMGCL-201ENST00000235958 USP31Q70CQ4 1352 aa13.89□□□□□ -0.19
HMGCL-201ENST00000235958 CC2D1BQ5T0F9 858 aaKnown RBP13.89□□□□□ -0.19
HMGCL-201ENST00000235958 PNPLA6Q8IY17 1366 aa13.88□□□□□ -0.19
HMGCL-201ENST00000235958 JCADQ9P266 1359 aa13.88□□□□□ -0.19
HMGCL-201ENST00000235958 GCP02774 474 aa13.88□□□□□ -0.19
HMGCL-201ENST00000235958 ALS2Q96Q42 1657 aa13.88□□□□□ -0.19
HMGCL-201ENST00000235958 NUTM2BA6NNL0 878 aaPredicted RBP13.87□□□□□ -0.19
HMGCL-201ENST00000235958 NUTM2EB1AL46 878 aaPredicted RBP13.87□□□□□ -0.19
HMGCL-201ENST00000235958 FBLN1P23142 703 aa13.87□□□□□ -0.19
HMGCL-201ENST00000235958 MORC1Q86VD1 984 aa13.87□□□□□ -0.19
HMGCL-201ENST00000235958 NUTM2AQ8IVF1 878 aaPredicted RBP13.87□□□□□ -0.19
HMGCL-201ENST00000235958 SOX12O15370 315 aa13.86□□□□□ -0.19
HMGCL-201ENST00000235958 HAP1P54257 671 aaPredicted RBP13.86□□□□□ -0.19
HMGCL-201ENST00000235958 NRKQ7Z2Y5 1582 aa13.86□□□□□ -0.19
HMGCL-201ENST00000235958 PIK3C2AO00443 1686 aa13.85□□□□□ -0.19
HMGCL-201ENST00000235958 NPC1L1Q9UHC9 1359 aa13.85□□□□□ -0.19
HMGCL-201ENST00000235958 TNNT2P45379 298 aaPredicted RBP13.85□□□□□ -0.19
HMGCL-201ENST00000235958 KCNH5Q8NCM2 988 aa13.85□□□□□ -0.19
HMGCL-201ENST00000235958 USP19O94966 1318 aa13.85□□□□□ -0.19
HMGCL-201ENST00000235958 ZC3H6P61129 1189 aaKnown RBP13.84□□□□□ -0.19
HMGCL-201ENST00000235958 NSD2O96028 1365 aa13.83□□□□□ -0.19
HMGCL-201ENST00000235958 ADAMTS2O95450 1211 aa13.83□□□□□ -0.2
HMGCL-201ENST00000235958 SPATA31A6Q5VVP1 1343 aa13.83□□□□□ -0.2
HMGCL-201ENST00000235958 FAM83GA6ND36 823 aa13.82□□□□□ -0.2
HMGCL-201ENST00000235958 KIF20BQ96Q89 1820 aa13.82□□□□□ -0.2
HMGCL-201ENST00000235958 MED1Q15648 1581 aaPredicted RBP13.82□□□□□ -0.2
HMGCL-201ENST00000235958 OVOS2A0A0J9YW53 1432 aa13.81□□□□□ -0.2
HMGCL-201ENST00000235958 OVOS2Q6IE36 1432 aa13.81□□□□□ -0.2
HMGCL-201ENST00000235958 ARHGEF25Q86VW2 580 aa13.81□□□□□ -0.2
HMGCL-201ENST00000235958 SHPRHQ149N8 1683 aa13.8□□□□□ -0.2
HMGCL-201ENST00000235958 RRS1Q15050 365 aaKnown RBP13.8□□□□□ -0.2
HMGCL-201ENST00000235958 DIEXFQ68CQ4 756 aaKnown RBP13.8□□□□□ -0.2
HMGCL-201ENST00000235958 MARF1Q9Y4F3 1742 aaKnown RBP13.8□□□□□ -0.2
HMGCL-201ENST00000235958 COL22A1Q8NFW1 1626 aaPredicted RBP13.79□□□□□ -0.2
HMGCL-201ENST00000235958 MAP2P11137 1827 aaKnown RBP13.79□□□□□ -0.2
HMGCL-201ENST00000235958 ZBTB7CA1YPR0 619 aa13.79□□□□□ -0.2
HMGCL-201ENST00000235958 RALBP1Q15311 655 aa13.79□□□□□ -0.2
HMGCL-201ENST00000235958 CHRNA2Q15822 529 aa13.79□□□□□ -0.2
HMGCL-201ENST00000235958 PRKRIP1Q9H875 184 aaPredicted RBP13.79□□□□□ -0.2
HMGCL-201ENST00000235958 PRDM11Q9NQV5 511 aa13.79□□□□□ -0.2
HMGCL-201ENST00000235958 POLKQ9UBT6 870 aa13.79□□□□□ -0.2
HMGCL-201ENST00000235958 PPM1GO15355 546 aaPredicted RBP13.78□□□□□ -0.2
HMGCL-201ENST00000235958 ANP32CO43423 234 aa13.78□□□□□ -0.2
HMGCL-201ENST00000235958 NGLY1Q96IV0 654 aa13.78□□□□□ -0.2
HMGCL-201ENST00000235958 MAP3K19Q56UN5 1328 aa13.78□□□□□ -0.2
HMGCL-201ENST00000235958 KIAA0232Q92628 1395 aa13.78□□□□□ -0.2
HMGCL-201ENST00000235958 SLIT3O75094 1523 aa13.78□□□□□ -0.2
HMGCL-201ENST00000235958 PPP2R1AP30153 589 aa13.77□□□□□ -0.21
HMGCL-201ENST00000235958 AMPHP49418 695 aa13.77□□□□□ -0.21
HMGCL-201ENST00000235958 MTHFSP49914 203 aa13.77□□□□□ -0.21
HMGCL-201ENST00000235958 AATKQ6ZMQ8 1374 aa13.77□□□□□ -0.21
HMGCL-201ENST00000235958 USP54Q70EL1 1684 aa13.77□□□□□ -0.21
HMGCL-201ENST00000235958 AXIN2Q9Y2T1 843 aa13.77□□□□□ -0.21
HMGCL-201ENST00000235958 EMILIN1Q9Y6C2 1016 aa13.77□□□□□ -0.21
HMGCL-201ENST00000235958 ANKRD26Q9UPS8 1709 aa13.76□□□□□ -0.21
HMGCL-201ENST00000235958 CRYBG1Q9Y4K1 1723 aa13.76□□□□□ -0.21
HMGCL-201ENST00000235958 CPDO75976 1380 aa13.76□□□□□ -0.21
HMGCL-201ENST00000235958 PARD3Q8TEW0 1356 aa13.76□□□□□ -0.21
HMGCL-201ENST00000235958 MEX3CQ5U5Q3 659 aaKnown RBP13.76□□□□□ -0.21
HMGCL-201ENST00000235958 IP6K1Q92551 441 aa13.76□□□□□ -0.21
HMGCL-201ENST00000235958 C8orf37Q96NL8 207 aa13.76□□□□□ -0.21
HMGCL-201ENST00000235958 NFAT5O94916 1531 aa13.74□□□□□ -0.21
HMGCL-201ENST00000235958 HSP90AB2PQ58FF8 381 aa13.74□□□□□ -0.21
HMGCL-201ENST00000235958 LRP6O75581 1613 aa13.74□□□□□ -0.21
HMGCL-201ENST00000235958 PHRF1Q9P1Y6 1649 aaKnown RBP13.74□□□□□ -0.21
HMGCL-201ENST00000235958 ABCA3Q99758 1704 aa13.73□□□□□ -0.21
HMGCL-201ENST00000235958 HOXC9P31274 260 aa13.73□□□□□ -0.21
HMGCL-201ENST00000235958 EVA1CP58658 441 aa13.73□□□□□ -0.21
HMGCL-201ENST00000235958 FNBP4Q8N3X1 1017 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms