RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 C1orf167Q5SNV9 1468 aa26.97■■□□□ 1.91
SNX3-201ENST00000230085 RGPD8O14715 1765 aaPredicted RBP26.96■■□□□ 1.91
SNX3-201ENST00000230085 PRR36Q9H6K5 1346 aa26.96■■□□□ 1.91
SNX3-201ENST00000230085 ORAI2Q96SN7 254 aa26.96■■□□□ 1.91
SNX3-201ENST00000230085 SLC24A1O60721 1099 aa26.95■■□□□ 1.9
SNX3-201ENST00000230085 TMF1P82094 1093 aa26.95■■□□□ 1.9
SNX3-201ENST00000230085 DISP3Q9P2K9 1392 aa26.95■■□□□ 1.9
SNX3-201ENST00000230085 NUDT16Q96DE0 195 aaKnown RBP26.94■■□□□ 1.9
SNX3-201ENST00000230085 USP32Q8NFA0 1604 aa26.94■■□□□ 1.9
SNX3-201ENST00000230085 PPM1GO15355 546 aaPredicted RBP26.94■■□□□ 1.9
SNX3-201ENST00000230085 ESCO1Q5FWF5 840 aa26.94■■□□□ 1.9
SNX3-201ENST00000230085 ATP7BP35670 1465 aa26.91■■□□□ 1.9
SNX3-201ENST00000230085 ANKARQ7Z5J8 1434 aa26.91■■□□□ 1.9
SNX3-201ENST00000230085 BRINP3Q76B58 766 aa26.91■■□□□ 1.9
SNX3-201ENST00000230085 DDRGK1Q96HY6 314 aa26.89■■□□□ 1.9
SNX3-201ENST00000230085 CCDC61Q9Y6R9 512 aa26.89■■□□□ 1.9
SNX3-201ENST00000230085 ROBO1Q9Y6N7 1651 aa26.87■■□□□ 1.89
SNX3-201ENST00000230085 PMFBP1Q8TBY8 1022 aa26.87■■□□□ 1.89
SNX3-201ENST00000230085 PHF8Q9UPP1 1060 aa26.85■■□□□ 1.89
SNX3-201ENST00000230085 DDX17Q92841 729 aaKnown RBP26.84■■□□□ 1.89
SNX3-201ENST00000230085 PUS7Q96PZ0 661 aaKnown RBP26.84■■□□□ 1.89
SNX3-201ENST00000230085 CABP1Q9NZU7 370 aa26.84■■□□□ 1.89
SNX3-201ENST00000230085 CDCA8Q53HL2 280 aa26.84■■□□□ 1.89
SNX3-201ENST00000230085 ATAD2Q6PL18 1390 aa26.84■■□□□ 1.89
SNX3-201ENST00000230085 FOXO3O43524 673 aa26.83■■□□□ 1.89
SNX3-201ENST00000230085 FBXO41Q8TF61 875 aa26.83■■□□□ 1.89
SNX3-201ENST00000230085 PPIP5K1Q6PFW1 1433 aa26.83■■□□□ 1.88
SNX3-201ENST00000230085 KDM2BQ8NHM5 1336 aa26.83■■□□□ 1.88
SNX3-201ENST00000230085 TOPAZ1Q8N9V7 1692 aa26.81■■□□□ 1.88
SNX3-201ENST00000230085 ITSN1Q15811 1721 aa26.81■■□□□ 1.88
SNX3-201ENST00000230085 SLC12A5Q9H2X9 1139 aa26.8■■□□□ 1.88
SNX3-201ENST00000230085 PLEKHG3A1L390 1219 aa26.79■■□□□ 1.88
SNX3-201ENST00000230085 NPC1L1Q9UHC9 1359 aa26.78■■□□□ 1.88
SNX3-201ENST00000230085 NGDNQ8NEJ9 315 aaKnown RBP26.78■■□□□ 1.88
SNX3-201ENST00000230085 ACEP12821 1306 aa26.77■■□□□ 1.88
SNX3-201ENST00000230085 XPCQ01831 940 aaPredicted RBP26.76■■□□□ 1.88
SNX3-201ENST00000230085 CDCA7LQ96GN5 454 aa26.76■■□□□ 1.88
SNX3-201ENST00000230085 KIF1AQ12756 1690 aa26.76■■□□□ 1.87
SNX3-201ENST00000230085 CNGB1Q14028 1251 aaPredicted RBP26.76■■□□□ 1.87
SNX3-201ENST00000230085 ZNF521Q96K83 1311 aa26.76■■□□□ 1.87
SNX3-201ENST00000230085 CENPQQ7L2Z9 268 aaPredicted RBP26.74■■□□□ 1.87
SNX3-201ENST00000230085 VIRMAQ69YN4 1812 aaKnown RBP26.74■■□□□ 1.87
SNX3-201ENST00000230085 NPHP3Q7Z494 1330 aa26.74■■□□□ 1.87
SNX3-201ENST00000230085 PSME1Q06323 249 aa26.74■■□□□ 1.87
SNX3-201ENST00000230085 POLR3AO14802 1390 aaPredicted RBP26.73■■□□□ 1.87
SNX3-201ENST00000230085 CRBNQ96SW2 442 aa26.72■■□□□ 1.87
SNX3-201ENST00000230085 NHSL1Q5SYE7 1610 aa26.72■■□□□ 1.87
SNX3-201ENST00000230085 NEFMP07197 916 aa26.71■■□□□ 1.87
SNX3-201ENST00000230085 HSPA1LP34931 641 aa26.71■■□□□ 1.87
SNX3-201ENST00000230085 KRT28Q7Z3Y7 464 aa26.71■■□□□ 1.87
SNX3-201ENST00000230085 PANK3Q9H999 370 aa26.7■■□□□ 1.86
SNX3-201ENST00000230085 AHDC1Q5TGY3 1603 aaPredicted RBP26.7■■□□□ 1.86
SNX3-201ENST00000230085 CD163L1Q9NR16 1453 aa26.69■■□□□ 1.86
SNX3-201ENST00000230085 NINLQ9Y2I6 1382 aa26.69■■□□□ 1.86
SNX3-201ENST00000230085 MYOM1P52179 1685 aa26.69■■□□□ 1.86
SNX3-201ENST00000230085 SOS2Q07890 1332 aaPredicted RBP26.69■■□□□ 1.86
SNX3-201ENST00000230085 PHLPP1O60346 1717 aa26.68■■□□□ 1.86
SNX3-201ENST00000230085 PXDNQ92626 1479 aa26.67■■□□□ 1.86
SNX3-201ENST00000230085 CPSF1Q10570 1443 aaKnown RBP26.67■■□□□ 1.86
SNX3-201ENST00000230085 NPM2Q86SE8 214 aaKnown RBP26.66■■□□□ 1.86
SNX3-201ENST00000230085 ZNF692Q9BU19 519 aaPredicted RBP26.66■■□□□ 1.86
SNX3-201ENST00000230085 TERF2IPQ9NYB0 399 aa26.66■■□□□ 1.86
SNX3-201ENST00000230085 A0A1W2PP64 1363 aa26.66■■□□□ 1.86
SNX3-201ENST00000230085 DUSP27Q5VZP5 1158 aa26.65■■□□□ 1.86
SNX3-201ENST00000230085 HDGFL2Q7Z4V5 671 aaPredicted RBP26.65■■□□□ 1.86
SNX3-201ENST00000230085 NGEFQ8N5V2 710 aa26.64■■□□□ 1.86
SNX3-201ENST00000230085 TRMT2AQ8IZ69 625 aaKnown RBP26.63■■□□□ 1.85
SNX3-201ENST00000230085 AKAP12Q02952 1782 aa26.63■■□□□ 1.85
SNX3-201ENST00000230085 USP6P35125 1406 aa26.63■■□□□ 1.85
SNX3-201ENST00000230085 COL16A1Q07092 1604 aaPredicted RBP26.63■■□□□ 1.85
SNX3-201ENST00000230085 ANKRD36BQ8N2N9 1353 aa26.63■■□□□ 1.85
SNX3-201ENST00000230085 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.63■■□□□ 1.85
SNX3-201ENST00000230085 LRRC59Q96AG4 307 aaKnown RBP26.61■■□□□ 1.85
SNX3-201ENST00000230085 SENP3-EIF4A1A0A087X0R7 540 aa26.61■■□□□ 1.85
SNX3-201ENST00000230085 ILDR1Q86SU0 546 aaPredicted RBP26.61■■□□□ 1.85
SNX3-201ENST00000230085 FAM161AQ3B820 660 aa26.6■■□□□ 1.85
SNX3-201ENST00000230085 CC2D1BQ5T0F9 858 aaKnown RBP26.6■■□□□ 1.85
SNX3-201ENST00000230085 AMER1Q5JTC6 1135 aaPredicted RBP26.59■■□□□ 1.85
SNX3-201ENST00000230085 CARD14Q9BXL6 1004 aa26.59■■□□□ 1.85
SNX3-201ENST00000230085 TRPM3Q9HCF6 1732 aaPredicted RBP26.59■■□□□ 1.85
SNX3-201ENST00000230085 PLIN1O60240 522 aa26.58■■□□□ 1.85
SNX3-201ENST00000230085 PPP2R1AP30153 589 aa26.58■■□□□ 1.85
SNX3-201ENST00000230085 ADAMTS8Q9UP79 889 aa26.58■■□□□ 1.85
SNX3-201ENST00000230085 SPATA31A3Q5VYP0 1347 aa26.58■■□□□ 1.85
SNX3-201ENST00000230085 SSH2Q76I76 1423 aa26.58■■□□□ 1.85
SNX3-201ENST00000230085 MON2Q7Z3U7 1717 aa26.58■■□□□ 1.85
SNX3-201ENST00000230085 LMOD2Q6P5Q4 547 aa26.58■■□□□ 1.85
SNX3-201ENST00000230085 LAS1LQ9Y4W2 734 aaKnown RBP26.58■■□□□ 1.85
SNX3-201ENST00000230085 SBNO1A3KN83 1393 aa26.58■■□□□ 1.84
SNX3-201ENST00000230085 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.57■■□□□ 1.84
SNX3-201ENST00000230085 SALL2Q9Y467 1007 aaPredicted RBP26.56■■□□□ 1.84
SNX3-201ENST00000230085 TTC21BQ7Z4L5 1316 aa26.56■■□□□ 1.84
SNX3-201ENST00000230085 GOLGA2Q08379 1002 aa26.56■■□□□ 1.84
SNX3-201ENST00000230085 TNS3Q68CZ2 1445 aa26.55■■□□□ 1.84
SNX3-201ENST00000230085 C8orf34Q49A92 452 aa26.55■■□□□ 1.84
SNX3-201ENST00000230085 EDC4Q6P2E9 1401 aaKnown RBP26.54■■□□□ 1.84
SNX3-201ENST00000230085 SLFN5Q08AF3 891 aa26.53■■□□□ 1.84
SNX3-201ENST00000230085 ABTB2Q8N961 1025 aa26.53■■□□□ 1.84
SNX3-201ENST00000230085 NRKQ7Z2Y5 1582 aa26.53■■□□□ 1.84
SNX3-201ENST00000230085 GSE1Q14687 1217 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms