RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 CCDC27Q2M243 656 aa17.74■□□□□ 0.43
SF1-201ENST00000227503 TNPO1Q92973 898 aaKnown RBP17.74■□□□□ 0.43
SF1-201ENST00000227503 NPM1P06748 294 aaKnown RBP eCLIP17.73■□□□□ 0.43
SF1-201ENST00000227503 PIK3C2BO00750 1634 aa17.73■□□□□ 0.43
SF1-201ENST00000227503 CAMSAP1Q5T5Y3 1602 aa17.73■□□□□ 0.43
SF1-201ENST00000227503 ANKRD36BQ8N2N9 1353 aa17.73■□□□□ 0.43
SF1-201ENST00000227503 A0A0U1RQG5 324 aaPredicted RBP17.73■□□□□ 0.43
SF1-201ENST00000227503 ARHGEF28Q8N1W1 1705 aaKnown RBP17.72■□□□□ 0.43
SF1-201ENST00000227503 NEXMIFQ5QGS0 1516 aa17.72■□□□□ 0.43
SF1-201ENST00000227503 EVC2Q86UK5 1308 aa17.72■□□□□ 0.43
SF1-201ENST00000227503 HSCBQ8IWL3 235 aa17.72■□□□□ 0.43
SF1-201ENST00000227503 FAM13BQ9NYF5 915 aa17.72■□□□□ 0.43
SF1-201ENST00000227503 PMFBP1Q8TBY8 1022 aa17.72■□□□□ 0.43
SF1-201ENST00000227503 PDCL3Q9H2J4 239 aa17.72■□□□□ 0.43
SF1-201ENST00000227503 CFAP53Q96M91 514 aa17.71■□□□□ 0.43
SF1-201ENST00000227503 NSD2O96028 1365 aa17.71■□□□□ 0.43
SF1-201ENST00000227503 DDX11L8A8MPP1 907 aa17.71■□□□□ 0.43
SF1-201ENST00000227503 NCBP3Q53F19 620 aaKnown RBP17.71■□□□□ 0.43
SF1-201ENST00000227503 NUTM2DQ5VT03 806 aaPredicted RBP17.71■□□□□ 0.43
SF1-201ENST00000227503 VGFO15240 615 aaPredicted RBP17.7■□□□□ 0.42
SF1-201ENST00000227503 TPM2P07951 284 aa17.7■□□□□ 0.42
SF1-201ENST00000227503 RIPK4P57078 832 aa17.69■□□□□ 0.42
SF1-201ENST00000227503 AK9Q5TCS8 1911 aa17.69■□□□□ 0.42
SF1-201ENST00000227503 AAMPQ13685 434 aa17.69■□□□□ 0.42
SF1-201ENST00000227503 ZBTB7CA1YPR0 619 aa17.68■□□□□ 0.42
SF1-201ENST00000227503 CABP2Q9NPB3 220 aa17.68■□□□□ 0.42
SF1-201ENST00000227503 R3HCC1Q9Y3T6 440 aaKnown RBP17.67■□□□□ 0.42
SF1-201ENST00000227503 ADGRB2O60241 1585 aa17.67■□□□□ 0.42
SF1-201ENST00000227503 RAPGEF3O95398 923 aa17.66■□□□□ 0.42
SF1-201ENST00000227503 PRDM4Q9UKN5 801 aa17.66■□□□□ 0.42
SF1-201ENST00000227503 CD2BP2O95400 341 aaKnown RBP17.66■□□□□ 0.42
SF1-201ENST00000227503 RWDD1Q9H446 243 aaPredicted RBP17.66■□□□□ 0.42
SF1-201ENST00000227503 ARHGAP31Q2M1Z3 1444 aa17.66■□□□□ 0.42
SF1-201ENST00000227503 HSP90AB1P08238 724 aaKnown RBP17.65■□□□□ 0.42
SF1-201ENST00000227503 U2AF1L5P0DN76 240 aaPredicted RBP17.65■□□□□ 0.42
SF1-201ENST00000227503 U2AF1Q01081 240 aaKnown RBP eCLIP17.65■□□□□ 0.424e-10■■■■■ 47.9
SF1-201ENST00000227503 PRDM10Q9NQV6 1147 aa17.65■□□□□ 0.42
SF1-201ENST00000227503 DIP2CQ9Y2E4 1556 aa17.65■□□□□ 0.42
SF1-201ENST00000227503 IDI1Q13907 227 aa17.65■□□□□ 0.42
SF1-201ENST00000227503 ZFYVE9O95405 1425 aa17.65■□□□□ 0.42
SF1-201ENST00000227503 NEO1Q92859 1461 aa17.65■□□□□ 0.42
SF1-201ENST00000227503 NASPP49321 788 aaPredicted RBP17.64■□□□□ 0.41
SF1-201ENST00000227503 A0A1W2PP64 1363 aa17.64■□□□□ 0.41
SF1-201ENST00000227503 ABCC11Q96J66 1382 aa17.64■□□□□ 0.41
SF1-201ENST00000227503 RBM42Q9BTD8 480 aaKnown RBP17.63■□□□□ 0.41
SF1-201ENST00000227503 XPCQ01831 940 aaPredicted RBP17.62■□□□□ 0.41
SF1-201ENST00000227503 SAFB2Q14151 953 aaKnown RBP eCLIP17.62■□□□□ 0.41
SF1-201ENST00000227503 SSFA2P28290 1259 aa17.62■□□□□ 0.41
SF1-201ENST00000227503 PLEKHF1Q96S99 279 aa17.62■□□□□ 0.41
SF1-201ENST00000227503 COL3A1P02461 1466 aaPredicted RBP17.61■□□□□ 0.41
SF1-201ENST00000227503 MSNP26038 577 aaKnown RBP17.61■□□□□ 0.41
SF1-201ENST00000227503 DDIT3P35638 169 aa17.61■□□□□ 0.41
SF1-201ENST00000227503 ZSCAN30Q86W11 494 aa17.61■□□□□ 0.41
SF1-201ENST00000227503 ZMYM3Q14202 1370 aa17.61■□□□□ 0.41
SF1-201ENST00000227503 OSCARQ8IYS5 282 aa17.6■□□□□ 0.41
SF1-201ENST00000227503 OFD1O75665 1012 aa17.6■□□□□ 0.41
SF1-201ENST00000227503 FTSJ3Q8IY81 847 aaKnown RBP17.6■□□□□ 0.41
SF1-201ENST00000227503 NCLP19338 710 aaKnown RBP17.59■□□□□ 0.41
SF1-201ENST00000227503 CALD1Q05682 793 aaKnown RBP17.59■□□□□ 0.41
SF1-201ENST00000227503 SLC52A1Q9NWF4 448 aa17.59■□□□□ 0.41
SF1-201ENST00000227503 STK26Q9P289 416 aa17.59■□□□□ 0.41
SF1-201ENST00000227503 MVPQ14764 893 aaKnown RBP17.59■□□□□ 0.41
SF1-201ENST00000227503 GBP4Q96PP9 640 aa17.59■□□□□ 0.41
SF1-201ENST00000227503 PTPRMP28827 1452 aa17.59■□□□□ 0.41
SF1-201ENST00000227503 CT47B1P0C2W7 299 aaPredicted RBP17.58■□□□□ 0.41
SF1-201ENST00000227503 GGNBP2Q9H3C7 697 aa17.58■□□□□ 0.41
SF1-201ENST00000227503 ZHX1Q9UKY1 873 aaPredicted RBP17.58■□□□□ 0.41
SF1-201ENST00000227503 SRPK2P78362 688 aaKnown RBP17.58■□□□□ 0.4
SF1-201ENST00000227503 CCDC173Q0VFZ6 552 aa17.58■□□□□ 0.4
SF1-201ENST00000227503 RAB3GAP1Q15042 981 aa17.58■□□□□ 0.4
SF1-201ENST00000227503 ZKSCAN2Q63HK3 967 aa17.58■□□□□ 0.4
SF1-201ENST00000227503 TSR2Q969E8 191 aaKnown RBP17.58■□□□□ 0.4
SF1-201ENST00000227503 LNPKQ9C0E8 428 aa17.58■□□□□ 0.4
SF1-201ENST00000227503 TRIM35Q9UPQ4 493 aa17.58■□□□□ 0.4
SF1-201ENST00000227503 CD163L1Q9NR16 1453 aa17.57■□□□□ 0.4
SF1-201ENST00000227503 DDX49Q9Y6V7 483 aaKnown RBP17.57■□□□□ 0.4
SF1-201ENST00000227503 TMPOP42166 694 aaKnown RBP17.57■□□□□ 0.4
SF1-201ENST00000227503 FYB1O15117 783 aa17.56■□□□□ 0.4
SF1-201ENST00000227503 ITPRIPQ8IWB1 547 aa17.56■□□□□ 0.4
SF1-201ENST00000227503 TMEM131LA2VDJ0 1609 aa17.56■□□□□ 0.4
SF1-201ENST00000227503 MED14O60244 1454 aa17.56■□□□□ 0.4
SF1-201ENST00000227503 RICTORQ6R327 1708 aa17.56■□□□□ 0.4
SF1-201ENST00000227503 MYO5BQ9ULV0 1848 aa17.56■□□□□ 0.4
SF1-201ENST00000227503 DZIP1LQ8IYY4 767 aaKnown RBP17.56■□□□□ 0.4
SF1-201ENST00000227503 JARID2Q92833 1246 aaPredicted RBP17.56■□□□□ 0.4
SF1-201ENST00000227503 ATAD2Q6PL18 1390 aa17.56■□□□□ 0.4
SF1-201ENST00000227503 NCOA3Q9Y6Q9 1424 aa17.55■□□□□ 0.4
SF1-201ENST00000227503 UQCRHLA0A096LP55 91 aa17.55■□□□□ 0.4
SF1-201ENST00000227503 U2SURPO15042 1029 aaKnown RBP17.55■□□□□ 0.4
SF1-201ENST00000227503 UQCRHP07919 91 aa17.55■□□□□ 0.4
SF1-201ENST00000227503 EXOSC9Q06265 439 aaKnown RBP17.55■□□□□ 0.4
SF1-201ENST00000227503 ISY1Q9ULR0 285 aaKnown RBP17.55■□□□□ 0.4
SF1-201ENST00000227503 YEATS2Q9ULM3 1422 aa17.55■□□□□ 0.4
SF1-201ENST00000227503 SENP3Q9H4L4 574 aaPredicted RBP17.55■□□□□ 0.4
SF1-201ENST00000227503 PPP1R9BQ96SB3 815 aa17.54■□□□□ 0.4
SF1-201ENST00000227503 CLTCQ00610 1675 aaKnown RBP17.54■□□□□ 0.4
SF1-201ENST00000227503 PRAM1Q96QH2 718 aa17.54■□□□□ 0.4
SF1-201ENST00000227503 ANKRD26Q9UPS8 1709 aa17.54■□□□□ 0.4
SF1-201ENST00000227503 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.54■□□□□ 0.4
SF1-201ENST00000227503 SMC5Q8IY18 1101 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms