RNA–Protein interactions for RNA: ENST00000227266.9

CTSC-201, Transcript of cathepsin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSC, Length 1,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-201ENST00000227266 MIER1Q8N108 512 aa15.15■□□□□ 0.02
CTSC-201ENST00000227266 IQSEC2Q5JU85 1478 aa15.15■□□□□ 0.02
CTSC-201ENST00000227266 GGNBP2Q9H3C7 697 aa15.15■□□□□ 0.02
CTSC-201ENST00000227266 FYB1O15117 783 aa15.14■□□□□ 0.01
CTSC-201ENST00000227266 KIF1AQ12756 1690 aa15.14■□□□□ 0.01
CTSC-201ENST00000227266 SSH2Q76I76 1423 aa15.13■□□□□ 0.01
CTSC-201ENST00000227266 LMOD2Q6P5Q4 547 aa15.13■□□□□ 0.01
CTSC-201ENST00000227266 PRKRIP1Q9H875 184 aaPredicted RBP15.13■□□□□ 0.01
CTSC-201ENST00000227266 TTC21AQ8NDW8 1320 aa15.12■□□□□ 0.01
CTSC-201ENST00000227266 ZRANB1Q9UGI0 708 aa15.12■□□□□ 0.01
CTSC-201ENST00000227266 NPC1L1Q9UHC9 1359 aa15.12■□□□□ 0.01
CTSC-201ENST00000227266 AKAP12Q02952 1782 aa15.12■□□□□ 0.01
CTSC-201ENST00000227266 NUTM2GQ5VZR2 741 aa15.11■□□□□ 0.01
CTSC-201ENST00000227266 MORC1Q86VD1 984 aa15.11■□□□□ 0.01
CTSC-201ENST00000227266 ABTB2Q8N961 1025 aa15.11■□□□□ 0.01
CTSC-201ENST00000227266 MON2Q7Z3U7 1717 aa15.11■□□□□ 0.01
CTSC-201ENST00000227266 BRD4O60885 1362 aaPredicted RBP15.11■□□□□ 0.01
CTSC-201ENST00000227266 TNNT2P45379 298 aaPredicted RBP15.11■□□□□ 0.01
CTSC-201ENST00000227266 NSD2O96028 1365 aa15.1■□□□□ 0.01
CTSC-201ENST00000227266 NLRP6P59044 892 aa15.09■□□□□ 0.01
CTSC-201ENST00000227266 RALBP1Q15311 655 aa15.09■□□□□ 0.01
CTSC-201ENST00000227266 COG3Q96JB2 828 aa15.09■□□□□ 0.01
CTSC-201ENST00000227266 PLEKHG5O94827 1062 aa15.09■□□□□ 0.01
CTSC-201ENST00000227266 NRKQ7Z2Y5 1582 aa15.09■□□□□ 0.01
CTSC-201ENST00000227266 PXDNQ92626 1479 aa15.09■□□□□ 0.01
CTSC-201ENST00000227266 ROBO1Q9Y6N7 1651 aa15.08■□□□□ 0.01
CTSC-201ENST00000227266 PARD3Q8TEW0 1356 aa15.08■□□□□ 0.01
CTSC-201ENST00000227266 CENPBP07199 599 aaPredicted RBP15.08■□□□□ 0
CTSC-201ENST00000227266 SOS2Q07890 1332 aaPredicted RBP15.08■□□□□ 0
CTSC-201ENST00000227266 SBNO1A3KN83 1393 aa15.07■□□□□ 0
CTSC-201ENST00000227266 SOX12O15370 315 aa15.06■□□□□ 0
CTSC-201ENST00000227266 SPATA31A3Q5VYP0 1347 aa15.06■□□□□ 0
CTSC-201ENST00000227266 TNS3Q68CZ2 1445 aa15.05■□□□□ 0
CTSC-201ENST00000227266 NLRP13Q86W25 1043 aa15.05■□□□□ -0
CTSC-201ENST00000227266 FBLN1P23142 703 aa15.04■□□□□ -0
CTSC-201ENST00000227266 MYBBP1AQ9BQG0 1328 aaKnown RBP15.04■□□□□ -0
CTSC-201ENST00000227266 USP31Q70CQ4 1352 aa15.04■□□□□ -0
CTSC-201ENST00000227266 OVOS2A0A0J9YW53 1432 aa15.04■□□□□ -0
CTSC-201ENST00000227266 OVOS2Q6IE36 1432 aa15.04■□□□□ -0
CTSC-201ENST00000227266 PPP2R1AP30153 589 aa15.04■□□□□ -0
CTSC-201ENST00000227266 PIK3C2AO00443 1686 aa15.03■□□□□ -0
CTSC-201ENST00000227266 TRPM3Q9HCF6 1732 aaPredicted RBP15.03■□□□□ -0
CTSC-201ENST00000227266 NHSL1Q5SYE7 1610 aa15.03■□□□□ -0
CTSC-201ENST00000227266 ARHGEF10O15013 1369 aa15.03■□□□□ -0
CTSC-201ENST00000227266 LRRC59Q96AG4 307 aaKnown RBP15.03■□□□□ -0
CTSC-201ENST00000227266 KIF20BQ96Q89 1820 aa15.02■□□□□ -0
CTSC-201ENST00000227266 AHDC1Q5TGY3 1603 aaPredicted RBP15.02■□□□□ -0
CTSC-201ENST00000227266 PELP1Q8IZL8 1130 aaKnown RBP15.02□□□□□ -0.01
CTSC-201ENST00000227266 CABLES1Q8TDN4 633 aa15.01□□□□□ -0.01
CTSC-201ENST00000227266 PPM1GO15355 546 aaPredicted RBP15□□□□□ -0.01
CTSC-201ENST00000227266 RRS1Q15050 365 aaKnown RBP15□□□□□ -0.01
CTSC-201ENST00000227266 USP19O94966 1318 aa14.99□□□□□ -0.01
CTSC-201ENST00000227266 GCP02774 474 aa14.99□□□□□ -0.01
CTSC-201ENST00000227266 MTHFSP49914 203 aa14.99□□□□□ -0.01
CTSC-201ENST00000227266 CCDC184Q52MB2 194 aa14.99□□□□□ -0.01
CTSC-201ENST00000227266 ALS2Q96Q42 1657 aa14.98□□□□□ -0.01
CTSC-201ENST00000227266 KCNH5Q8NCM2 988 aa14.98□□□□□ -0.01
CTSC-201ENST00000227266 MRS2Q9HD23 443 aa14.98□□□□□ -0.01
CTSC-201ENST00000227266 EMILIN1Q9Y6C2 1016 aa14.98□□□□□ -0.01
CTSC-201ENST00000227266 ZBTB7CA1YPR0 619 aa14.98□□□□□ -0.01
CTSC-201ENST00000227266 CCER2I3L3R5 266 aa14.98□□□□□ -0.01
CTSC-201ENST00000227266 HAP1P54257 671 aaPredicted RBP14.98□□□□□ -0.01
CTSC-201ENST00000227266 POLKQ9UBT6 870 aa14.98□□□□□ -0.01
CTSC-201ENST00000227266 ANKRD26Q9UPS8 1709 aa14.98□□□□□ -0.01
CTSC-201ENST00000227266 AATKQ6ZMQ8 1374 aa14.97□□□□□ -0.01
CTSC-201ENST00000227266 PHLPP1O60346 1717 aa14.97□□□□□ -0.01
CTSC-201ENST00000227266 HSPA1LP34931 641 aa14.96□□□□□ -0.01
CTSC-201ENST00000227266 COL16A1Q07092 1604 aaPredicted RBP14.96□□□□□ -0.02
CTSC-201ENST00000227266 ZC3H6P61129 1189 aaKnown RBP14.96□□□□□ -0.02
CTSC-201ENST00000227266 PNPLA6Q8IY17 1366 aa14.96□□□□□ -0.02
CTSC-201ENST00000227266 MED1Q15648 1581 aaPredicted RBP14.95□□□□□ -0.02
CTSC-201ENST00000227266 MAP3K19Q56UN5 1328 aa14.95□□□□□ -0.02
CTSC-201ENST00000227266 AMPHP49418 695 aa14.94□□□□□ -0.02
CTSC-201ENST00000227266 SLIT3O75094 1523 aa14.94□□□□□ -0.02
CTSC-201ENST00000227266 CFAP53Q96M91 514 aa14.94□□□□□ -0.02
CTSC-201ENST00000227266 USP54Q70EL1 1684 aa14.93□□□□□ -0.02
CTSC-201ENST00000227266 MARF1Q9Y4F3 1742 aaKnown RBP14.93□□□□□ -0.02
CTSC-201ENST00000227266 NFAT5O94916 1531 aa14.92□□□□□ -0.02
CTSC-201ENST00000227266 YTHDC1Q96MU7 727 aaKnown RBP14.92□□□□□ -0.02
CTSC-201ENST00000227266 ARHGEF25Q86VW2 580 aa14.92□□□□□ -0.02
CTSC-201ENST00000227266 NUTM2BA6NNL0 878 aaPredicted RBP14.91□□□□□ -0.02
CTSC-201ENST00000227266 NUTM2EB1AL46 878 aaPredicted RBP14.91□□□□□ -0.02
CTSC-201ENST00000227266 NUTM2AQ8IVF1 878 aaPredicted RBP14.91□□□□□ -0.02
CTSC-201ENST00000227266 JCADQ9P266 1359 aa14.91□□□□□ -0.02
CTSC-201ENST00000227266 SMG6Q86US8 1419 aaKnown RBP14.9□□□□□ -0.02
CTSC-201ENST00000227266 MYT1Q01538 1121 aa14.9□□□□□ -0.02
CTSC-201ENST00000227266 HSP90AB2PQ58FF8 381 aa14.9□□□□□ -0.02
CTSC-201ENST00000227266 KIAA0232Q92628 1395 aa14.9□□□□□ -0.02
CTSC-201ENST00000227266 HOXC9P31274 260 aa14.9□□□□□ -0.02
CTSC-201ENST00000227266 CHRNA2Q15822 529 aa14.9□□□□□ -0.02
CTSC-201ENST00000227266 PRDM11Q9NQV5 511 aa14.9□□□□□ -0.02
CTSC-201ENST00000227266 FLT4P35916 1363 aa14.89□□□□□ -0.03
CTSC-201ENST00000227266 CDK12Q9NYV4 1490 aaPredicted RBP14.89□□□□□ -0.03
CTSC-201ENST00000227266 PHRF1Q9P1Y6 1649 aaKnown RBP14.88□□□□□ -0.03
CTSC-201ENST00000227266 FAM9BQ8IZU0 186 aa14.88□□□□□ -0.03
CTSC-201ENST00000227266 IP6K1Q92551 441 aa14.88□□□□□ -0.03
CTSC-201ENST00000227266 DIAPH1O60610 1272 aaKnown RBP14.88□□□□□ -0.03
CTSC-201ENST00000227266 ADAMTS2O95450 1211 aa14.88□□□□□ -0.03
CTSC-201ENST00000227266 FBXO41Q8TF61 875 aa14.88□□□□□ -0.03
CTSC-201ENST00000227266 LTV1Q96GA3 475 aaPredicted RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms