RNA–Protein interactions for RNA: ENST00000224949.8

PITRM1-201, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PITRM1, Length 3,450 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-201ENST00000224949 GAS2L2Q8NHY3 880 aa15.73■□□□□ 0.11
PITRM1-201ENST00000224949 IQSEC2Q5JU85 1478 aa15.73■□□□□ 0.11
PITRM1-201ENST00000224949 ZNF518AQ6AHZ1 1483 aa15.73■□□□□ 0.11
PITRM1-201ENST00000224949 RBM25P49756 843 aaKnown RBP15.73■□□□□ 0.11
PITRM1-201ENST00000224949 MCTP1Q6DN14 999 aa15.73■□□□□ 0.11
PITRM1-201ENST00000224949 KIAA1211Q6ZU35 1233 aa15.73■□□□□ 0.11
PITRM1-201ENST00000224949 CFAP65Q6ZU64 1925 aaKnown RBP15.73■□□□□ 0.11
PITRM1-201ENST00000224949 EVC2Q86UK5 1308 aa15.73■□□□□ 0.11
PITRM1-201ENST00000224949 FBLN1P23142 703 aa15.72■□□□□ 0.11
PITRM1-201ENST00000224949 SKOR2Q2VWA4 1001 aaPredicted RBP15.72■□□□□ 0.11
PITRM1-201ENST00000224949 TBC1D9Q6ZT07 1266 aa15.72■□□□□ 0.11
PITRM1-201ENST00000224949 KIF16BQ96L93 1317 aa15.72■□□□□ 0.11
PITRM1-201ENST00000224949 FOXD4L5Q5VV16 416 aaPredicted RBP15.72■□□□□ 0.11
PITRM1-201ENST00000224949 ABCA6Q8N139 1617 aa15.72■□□□□ 0.11
PITRM1-201ENST00000224949 FOXD4L4Q8WXT5 416 aaPredicted RBP15.72■□□□□ 0.11
PITRM1-201ENST00000224949 RBM10P98175 930 aaKnown RBP15.71■□□□□ 0.11
PITRM1-201ENST00000224949 CAVIN1Q6NZI2 390 aaKnown RBP15.71■□□□□ 0.11
PITRM1-201ENST00000224949 SNX21Q969T3 373 aa15.71■□□□□ 0.11
PITRM1-201ENST00000224949 ERCC6L2Q5T890 1561 aa15.7■□□□□ 0.1
PITRM1-201ENST00000224949 CT47B1P0C2W7 299 aaPredicted RBP15.7■□□□□ 0.1
PITRM1-201ENST00000224949 HMOX1P09601 288 aa15.7■□□□□ 0.1
PITRM1-201ENST00000224949 CIZ1Q9ULV3 898 aaPredicted RBP15.7■□□□□ 0.1
PITRM1-201ENST00000224949 SHPRHQ149N8 1683 aa15.7■□□□□ 0.1
PITRM1-201ENST00000224949 MINK1Q8N4C8 1332 aaPredicted RBP15.69■□□□□ 0.1
PITRM1-201ENST00000224949 ISY1Q9ULR0 285 aaKnown RBP15.69■□□□□ 0.1
PITRM1-201ENST00000224949 ABCC1P33527 1531 aa15.68■□□□□ 0.1
PITRM1-201ENST00000224949 MAP3K4Q9Y6R4 1608 aa15.68■□□□□ 0.1
PITRM1-201ENST00000224949 DIAPH1O60610 1272 aaKnown RBP15.68■□□□□ 0.1
PITRM1-201ENST00000224949 BMP2KLQ5H9B9 411 aa15.68■□□□□ 0.1
PITRM1-201ENST00000224949 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.68■□□□□ 0.1
PITRM1-201ENST00000224949 C14orf93Q9H972 538 aaKnown RBP15.68■□□□□ 0.1
PITRM1-201ENST00000224949 CALD1Q05682 793 aaKnown RBP15.67■□□□□ 0.1
PITRM1-201ENST00000224949 CCDC173Q0VFZ6 552 aa15.67■□□□□ 0.1
PITRM1-201ENST00000224949 TPRNQ4KMQ1 711 aa15.67■□□□□ 0.1
PITRM1-201ENST00000224949 KIF2CQ99661 725 aa15.67■□□□□ 0.1
PITRM1-201ENST00000224949 CD109Q6YHK3 1445 aa15.67■□□□□ 0.1
PITRM1-201ENST00000224949 BAG4O95429 457 aaKnown RBP15.67■□□□□ 0.1
PITRM1-201ENST00000224949 PRKAR2BP31323 418 aa15.67■□□□□ 0.1
PITRM1-201ENST00000224949 DDIT3P35638 169 aa15.67■□□□□ 0.1
PITRM1-201ENST00000224949 PLEKHF1Q96S99 279 aa15.66■□□□□ 0.1
PITRM1-201ENST00000224949 R3HCC1Q9Y3T6 440 aaKnown RBP15.66■□□□□ 0.1
PITRM1-201ENST00000224949 TSPYL6Q8N831 410 aa15.65■□□□□ 0.1
PITRM1-201ENST00000224949 FAM13BQ9NYF5 915 aa15.65■□□□□ 0.1
PITRM1-201ENST00000224949 PTMSP20962 102 aa15.64■□□□□ 0.09
PITRM1-201ENST00000224949 ZSCAN30Q86W11 494 aa15.64■□□□□ 0.09
PITRM1-201ENST00000224949 CHAMP1Q96JM3 812 aa15.64■□□□□ 0.09
PITRM1-201ENST00000224949 SBNO2Q9Y2G9 1366 aa15.64■□□□□ 0.09
PITRM1-201ENST00000224949 CDC45O75419 566 aa15.64■□□□□ 0.09
PITRM1-201ENST00000224949 PKP1Q13835 747 aa15.64■□□□□ 0.09
PITRM1-201ENST00000224949 ATAD2Q6PL18 1390 aa15.64■□□□□ 0.09
PITRM1-201ENST00000224949 ANKRD36BQ8N2N9 1353 aa15.64■□□□□ 0.09
PITRM1-201ENST00000224949 ABCC11Q96J66 1382 aa15.64■□□□□ 0.09
PITRM1-201ENST00000224949 ZFYVE16Q7Z3T8 1539 aa15.64■□□□□ 0.09
PITRM1-201ENST00000224949 RBM27Q9P2N5 1060 aaKnown RBP15.63■□□□□ 0.09
PITRM1-201ENST00000224949 GCC1Q96CN9 775 aa15.63■□□□□ 0.09
PITRM1-201ENST00000224949 MYOM2P54296 1465 aa15.63■□□□□ 0.09
PITRM1-201ENST00000224949 PRPF40AO75400 957 aaKnown RBP15.63■□□□□ 0.09
PITRM1-201ENST00000224949 TPM2P07951 284 aa15.63■□□□□ 0.09
PITRM1-201ENST00000224949 TET3O43151 1660 aa15.63■□□□□ 0.09
PITRM1-201ENST00000224949 AK9Q5TCS8 1911 aa15.62■□□□□ 0.09
PITRM1-201ENST00000224949 NCOA3Q9Y6Q9 1424 aa15.62■□□□□ 0.09
PITRM1-201ENST00000224949 FOXD4L6Q3SYB3 417 aaPredicted RBP15.62■□□□□ 0.09
PITRM1-201ENST00000224949 FOXD4L3Q6VB84 417 aaPredicted RBP15.62■□□□□ 0.09
PITRM1-201ENST00000224949 NOL8Q76FK4 1167 aaKnown RBP15.62■□□□□ 0.09
PITRM1-201ENST00000224949 C16orf71Q8IYS4 520 aaPredicted RBP15.62■□□□□ 0.09
PITRM1-201ENST00000224949 A0A1W2PP64 1363 aa15.62■□□□□ 0.09
PITRM1-201ENST00000224949 ZBTB7BO15156 539 aaPredicted RBP15.62■□□□□ 0.09
PITRM1-201ENST00000224949 XPCQ01831 940 aaPredicted RBP15.62■□□□□ 0.09
PITRM1-201ENST00000224949 FYB1O15117 783 aa15.62■□□□□ 0.09
PITRM1-201ENST00000224949 KLHL40Q2TBA0 621 aa15.62■□□□□ 0.09
PITRM1-201ENST00000224949 SHROOM2Q13796 1616 aa15.61■□□□□ 0.09
PITRM1-201ENST00000224949 PPIP5K1Q6PFW1 1433 aa15.61■□□□□ 0.09
PITRM1-201ENST00000224949 RNF214Q8ND24 703 aa15.61■□□□□ 0.09
PITRM1-201ENST00000224949 TERF2IPQ9NYB0 399 aa15.61■□□□□ 0.09
PITRM1-201ENST00000224949 ATP7AQ04656 1500 aa15.6■□□□□ 0.09
PITRM1-201ENST00000224949 FANCAO15360 1455 aa15.6■□□□□ 0.09
PITRM1-201ENST00000224949 KIF1BO60333 1816 aa15.6■□□□□ 0.09
PITRM1-201ENST00000224949 ALDH1L2Q3SY69 923 aa15.59■□□□□ 0.09
PITRM1-201ENST00000224949 SIRT2Q8IXJ6 389 aa15.59■□□□□ 0.09
PITRM1-201ENST00000224949 ZGPATQ8N5A5 531 aaKnown RBP15.59■□□□□ 0.09
PITRM1-201ENST00000224949 ZSCAN23Q3MJ62 389 aa15.59■□□□□ 0.09
PITRM1-201ENST00000224949 MPNDQ8N594 471 aa15.59■□□□□ 0.09
PITRM1-201ENST00000224949 PHACTR3Q96KR7 559 aa15.59■□□□□ 0.09
PITRM1-201ENST00000224949 GSPT1P15170 499 aaKnown RBP15.59■□□□□ 0.09
PITRM1-201ENST00000224949 KIAA1210Q9ULL0 1709 aa15.58■□□□□ 0.09
PITRM1-201ENST00000224949 SMARCA5O60264 1052 aaPredicted RBP15.58■□□□□ 0.09
PITRM1-201ENST00000224949 ADGRL1O94910 1474 aa15.58■□□□□ 0.08
PITRM1-201ENST00000224949 PRIM1P49642 420 aaKnown RBP15.58■□□□□ 0.08
PITRM1-201ENST00000224949 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.58■□□□□ 0.08
PITRM1-201ENST00000224949 HDGFL2Q7Z4V5 671 aaPredicted RBP15.58■□□□□ 0.08
PITRM1-201ENST00000224949 OTUD7AQ8TE49 926 aaPredicted RBP15.58■□□□□ 0.08
PITRM1-201ENST00000224949 RBSNQ9H1K0 784 aa15.58■□□□□ 0.08
PITRM1-201ENST00000224949 QRICH2Q9H0J4 1663 aa15.58■□□□□ 0.08
PITRM1-201ENST00000224949 VGFO15240 615 aaPredicted RBP15.58■□□□□ 0.08
PITRM1-201ENST00000224949 PRAM1Q96QH2 718 aa15.58■□□□□ 0.08
PITRM1-201ENST00000224949 CHMP4BQ9H444 224 aaKnown RBP15.58■□□□□ 0.08
PITRM1-201ENST00000224949 PTMAP06454 111 aaKnown RBP15.57■□□□□ 0.08
PITRM1-201ENST00000224949 DCTN1Q14203 1278 aa15.57■□□□□ 0.08
PITRM1-201ENST00000224949 TWISTNBQ3B726 338 aaPredicted RBP15.57■□□□□ 0.08
PITRM1-201ENST00000224949 MROH2AA6NES4 1674 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms