RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 POGKQ9P215 609 aa13.17□□□□□ -0.3
USP11-201ENST00000218348 MARF1Q9Y4F3 1742 aaKnown RBP13.17□□□□□ -0.3
USP11-201ENST00000218348 APAF1O14727 1248 aa13.16□□□□□ -0.3
USP11-201ENST00000218348 MORC1Q86VD1 984 aa13.16□□□□□ -0.3
USP11-201ENST00000218348 MON2Q7Z3U7 1717 aa13.16□□□□□ -0.3
USP11-201ENST00000218348 DCCP43146 1447 aa13.16□□□□□ -0.3
USP11-201ENST00000218348 USP54Q70EL1 1684 aa13.15□□□□□ -0.3
USP11-201ENST00000218348 IQSEC2Q5JU85 1478 aa13.15□□□□□ -0.3
USP11-201ENST00000218348 SKAP1Q86WV1 359 aa13.15□□□□□ -0.31
USP11-201ENST00000218348 WAPLQ7Z5K2 1190 aa13.14□□□□□ -0.31
USP11-201ENST00000218348 PRAM1Q96QH2 718 aa13.14□□□□□ -0.31
USP11-201ENST00000218348 RRP1P56182 461 aaKnown RBP13.13□□□□□ -0.31
USP11-201ENST00000218348 TRPM3Q9HCF6 1732 aaPredicted RBP13.13□□□□□ -0.31
USP11-201ENST00000218348 FBLN1P23142 703 aa13.12□□□□□ -0.31
USP11-201ENST00000218348 NSD3Q9BZ95 1437 aa13.12□□□□□ -0.31
USP11-201ENST00000218348 ERICH6BQ5W0A0 696 aa13.11□□□□□ -0.31
USP11-201ENST00000218348 GGNBP2Q9H3C7 697 aa13.11□□□□□ -0.31
USP11-201ENST00000218348 DMRT2Q9Y5R5 561 aa13.11□□□□□ -0.31
USP11-201ENST00000218348 NHSL1Q5SYE7 1610 aa13.11□□□□□ -0.31
USP11-201ENST00000218348 C20orf194Q5TEA3 1177 aa13.11□□□□□ -0.31
USP11-201ENST00000218348 MST1RQ04912 1400 aa13.11□□□□□ -0.31
USP11-201ENST00000218348 NUTM2FA1L443 756 aa13.11□□□□□ -0.31
USP11-201ENST00000218348 PPM1GO15355 546 aaPredicted RBP13.11□□□□□ -0.31
USP11-201ENST00000218348 TMEM94Q12767 1356 aa13.11□□□□□ -0.31
USP11-201ENST00000218348 CRYBG1Q9Y4K1 1723 aa13.11□□□□□ -0.31
USP11-201ENST00000218348 SPINK5Q9NQ38 1064 aaPredicted RBP13.1□□□□□ -0.31
USP11-201ENST00000218348 ANKARQ7Z5J8 1434 aa13.1□□□□□ -0.31
USP11-201ENST00000218348 KIF1AQ12756 1690 aa13.1□□□□□ -0.31
USP11-201ENST00000218348 MTHFSP49914 203 aa13.1□□□□□ -0.31
USP11-201ENST00000218348 PRR36Q9H6K5 1346 aa13.09□□□□□ -0.31
USP11-201ENST00000218348 PUS7Q96PZ0 661 aaKnown RBP13.09□□□□□ -0.31
USP11-201ENST00000218348 EVC2Q86UK5 1308 aa13.08□□□□□ -0.31
USP11-201ENST00000218348 PDE4CQ08493 712 aa13.08□□□□□ -0.31
USP11-201ENST00000218348 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.08□□□□□ -0.31
USP11-201ENST00000218348 CRBNQ96SW2 442 aa13.08□□□□□ -0.32
USP11-201ENST00000218348 CPSF1Q10570 1443 aaKnown RBP13.07□□□□□ -0.32
USP11-201ENST00000218348 SSH2Q76I76 1423 aa13.07□□□□□ -0.32
USP11-201ENST00000218348 U2SURPO15042 1029 aaKnown RBP13.07□□□□□ -0.32
USP11-201ENST00000218348 ANKRD26Q9UPS8 1709 aa13.07□□□□□ -0.32
USP11-201ENST00000218348 ALS2Q96Q42 1657 aa13.06□□□□□ -0.32
USP11-201ENST00000218348 GOLGA2Q08379 1002 aa13.06□□□□□ -0.32
USP11-201ENST00000218348 NBR1Q14596 966 aa13.06□□□□□ -0.32
USP11-201ENST00000218348 KLHL34Q8N239 644 aa13.06□□□□□ -0.32
USP11-201ENST00000218348 C1orf167Q5SNV9 1468 aa13.05□□□□□ -0.32
USP11-201ENST00000218348 U2AF1L5P0DN76 240 aaPredicted RBP13.05□□□□□ -0.32
USP11-201ENST00000218348 U2AF1Q01081 240 aaKnown RBP eCLIP13.05□□□□□ -0.32
USP11-201ENST00000218348 PDE3BQ13370 1112 aa13.05□□□□□ -0.32
USP11-201ENST00000218348 ZMYND15Q9H091 742 aa13.05□□□□□ -0.32
USP11-201ENST00000218348 CABP1Q9NZU7 370 aa13.05□□□□□ -0.32
USP11-201ENST00000218348 ROBO1Q9Y6N7 1651 aa13.04□□□□□ -0.32
USP11-201ENST00000218348 POLR3AO14802 1390 aaPredicted RBP13.04□□□□□ -0.32
USP11-201ENST00000218348 WASLO00401 505 aaPredicted RBP13.04□□□□□ -0.32
USP11-201ENST00000218348 KIF20BQ96Q89 1820 aa13.04□□□□□ -0.32
USP11-201ENST00000218348 PIK3C2AO00443 1686 aa13.04□□□□□ -0.32
USP11-201ENST00000218348 BCAR3O75815 825 aa13.03□□□□□ -0.32
USP11-201ENST00000218348 CDK19Q9BWU1 502 aa13.03□□□□□ -0.32
USP11-201ENST00000218348 BCL2L13Q9BXK5 485 aa13.03□□□□□ -0.32
USP11-201ENST00000218348 CGNL1Q0VF96 1302 aa13.03□□□□□ -0.32
USP11-201ENST00000218348 AHDC1Q5TGY3 1603 aaPredicted RBP13.03□□□□□ -0.32
USP11-201ENST00000218348 DUSP27Q5VZP5 1158 aa13.03□□□□□ -0.32
USP11-201ENST00000218348 RBM33Q96EV2 1170 aaKnown RBP13.03□□□□□ -0.32
USP11-201ENST00000218348 RNF123Q5XPI4 1314 aa13.03□□□□□ -0.32
USP11-201ENST00000218348 NPM2Q86SE8 214 aaKnown RBP13.03□□□□□ -0.32
USP11-201ENST00000218348 VSIG10Q8N0Z9 540 aa13.02□□□□□ -0.32
USP11-201ENST00000218348 BCL11BQ9C0K0 894 aaPredicted RBP13.02□□□□□ -0.32
USP11-201ENST00000218348 ABCA3Q99758 1704 aa13.02□□□□□ -0.33
USP11-201ENST00000218348 PXDNQ92626 1479 aa13.02□□□□□ -0.33
USP11-201ENST00000218348 BLMP54132 1417 aaPredicted RBP13.01□□□□□ -0.33
USP11-201ENST00000218348 SOX12O15370 315 aa13.01□□□□□ -0.33
USP11-201ENST00000218348 PDIA4P13667 645 aaKnown RBP13.01□□□□□ -0.33
USP11-201ENST00000218348 FRAT1Q92837 279 aaPredicted RBP13.01□□□□□ -0.33
USP11-201ENST00000218348 TCP11L2Q8N4U5 519 aa13□□□□□ -0.33
USP11-201ENST00000218348 NINLQ9Y2I6 1382 aa13□□□□□ -0.33
USP11-201ENST00000218348 COL16A1Q07092 1604 aaPredicted RBP13□□□□□ -0.33
USP11-201ENST00000218348 C19orf44Q9H6X5 657 aa13□□□□□ -0.33
USP11-201ENST00000218348 CANXP27824 592 aaKnown RBP12.99□□□□□ -0.33
USP11-201ENST00000218348 COL22A1Q8NFW1 1626 aaPredicted RBP12.99□□□□□ -0.33
USP11-201ENST00000218348 PPIP5K1Q6PFW1 1433 aa12.99□□□□□ -0.33
USP11-201ENST00000218348 CFAP53Q96M91 514 aa12.98□□□□□ -0.33
USP11-201ENST00000218348 ZRANB1Q9UGI0 708 aa12.98□□□□□ -0.33
USP11-201ENST00000218348 A0A1W2PP64 1363 aa12.98□□□□□ -0.33
USP11-201ENST00000218348 ATAD2Q6PL18 1390 aa12.98□□□□□ -0.33
USP11-201ENST00000218348 SLFN5Q08AF3 891 aa12.98□□□□□ -0.33
USP11-201ENST00000218348 PROSER2Q86WR7 435 aaPredicted RBP12.98□□□□□ -0.33
USP11-201ENST00000218348 MED1Q15648 1581 aaPredicted RBP12.98□□□□□ -0.33
USP11-201ENST00000218348 PLEKHG3A1L390 1219 aa12.97□□□□□ -0.33
USP11-201ENST00000218348 ANKRD36BQ8N2N9 1353 aa12.97□□□□□ -0.33
USP11-201ENST00000218348 FYB1O15117 783 aa12.96□□□□□ -0.33
USP11-201ENST00000218348 WWC1Q8IX03 1113 aa12.96□□□□□ -0.33
USP11-201ENST00000218348 TERF2IPQ9NYB0 399 aa12.96□□□□□ -0.33
USP11-201ENST00000218348 CLUAP1Q96AJ1 413 aa12.96□□□□□ -0.34
USP11-201ENST00000218348 PHRF1Q9P1Y6 1649 aaKnown RBP12.96□□□□□ -0.34
USP11-201ENST00000218348 MSH6P52701 1360 aa12.95□□□□□ -0.34
USP11-201ENST00000218348 HDGFL2Q7Z4V5 671 aaPredicted RBP12.95□□□□□ -0.34
USP11-201ENST00000218348 USP6P35125 1406 aa12.95□□□□□ -0.34
USP11-201ENST00000218348 NUDT16Q96DE0 195 aaKnown RBP12.95□□□□□ -0.34
USP11-201ENST00000218348 TNNQ9UQP3 1299 aa12.94□□□□□ -0.34
USP11-201ENST00000218348 PANK1Q8TE04 598 aa12.94□□□□□ -0.34
USP11-201ENST00000218348 TSR2Q969E8 191 aaKnown RBP12.94□□□□□ -0.34
USP11-201ENST00000218348 ZNF521Q96K83 1311 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms