RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 NAP1L5Q96NT1 182 aaPredicted RBP12.13□□□□□ -0.47
CSTF1-201ENST00000217109 ATP7AQ04656 1500 aa12.12□□□□□ -0.47
CSTF1-201ENST00000217109 ZNF518AQ6AHZ1 1483 aa12.12□□□□□ -0.47
CSTF1-201ENST00000217109 NUDT16Q96DE0 195 aaKnown RBP12.12□□□□□ -0.47
CSTF1-201ENST00000217109 ANKRD36BQ8N2N9 1353 aa12.12□□□□□ -0.47
CSTF1-201ENST00000217109 NPC1L1Q9UHC9 1359 aa12.12□□□□□ -0.47
CSTF1-201ENST00000217109 NFE2L2Q16236 605 aa12.12□□□□□ -0.47
CSTF1-201ENST00000217109 ZNF521Q96K83 1311 aa12.11□□□□□ -0.47
CSTF1-201ENST00000217109 CHD1LQ86WJ1 897 aa12.11□□□□□ -0.47
CSTF1-201ENST00000217109 TSPYL4Q9UJ04 414 aa12.11□□□□□ -0.47
CSTF1-201ENST00000217109 CCDC61Q9Y6R9 512 aa12.11□□□□□ -0.47
CSTF1-201ENST00000217109 MYO5CQ9NQX4 1742 aa12.11□□□□□ -0.47
CSTF1-201ENST00000217109 FAM83GA6ND36 823 aa12.11□□□□□ -0.47
CSTF1-201ENST00000217109 ZRANB1Q9UGI0 708 aa12.11□□□□□ -0.47
CSTF1-201ENST00000217109 RILPL2Q969X0 211 aa12.1□□□□□ -0.47
CSTF1-201ENST00000217109 MIS18AQ9NYP9 233 aa12.1□□□□□ -0.47
CSTF1-201ENST00000217109 TBC1D2Q9BYX2 928 aa12.1□□□□□ -0.47
CSTF1-201ENST00000217109 FKBP5Q13451 457 aaPredicted RBP12.09□□□□□ -0.47
CSTF1-201ENST00000217109 PTPRTO14522 1441 aa12.09□□□□□ -0.47
CSTF1-201ENST00000217109 PRDM15P57071 1507 aaPredicted RBP12.09□□□□□ -0.47
CSTF1-201ENST00000217109 CROCC2H7BZ55 1655 aa12.09□□□□□ -0.47
CSTF1-201ENST00000217109 EIF2S2P20042 333 aaKnown RBP12.09□□□□□ -0.47
CSTF1-201ENST00000217109 MCM10Q7L590 875 aa12.09□□□□□ -0.47
CSTF1-201ENST00000217109 A0A1W2PP64 1363 aa12.09□□□□□ -0.47
CSTF1-201ENST00000217109 NLRP6P59044 892 aa12.08□□□□□ -0.47
CSTF1-201ENST00000217109 FOXD4L6Q3SYB3 417 aaPredicted RBP12.08□□□□□ -0.47
CSTF1-201ENST00000217109 FOXD4L3Q6VB84 417 aaPredicted RBP12.08□□□□□ -0.47
CSTF1-201ENST00000217109 CDC42BPBQ9Y5S2 1711 aa12.08□□□□□ -0.48
CSTF1-201ENST00000217109 NCKAP5LQ9HCH0 1330 aa12.08□□□□□ -0.48
CSTF1-201ENST00000217109 SLC4A2P04920 1241 aa12.08□□□□□ -0.48
CSTF1-201ENST00000217109 CCDC27Q2M243 656 aa12.08□□□□□ -0.48
CSTF1-201ENST00000217109 DDX11L8A8MPP1 907 aa12.08□□□□□ -0.48
CSTF1-201ENST00000217109 MCCP23508 829 aa12.08□□□□□ -0.48
CSTF1-201ENST00000217109 KCNJ4P48050 445 aa12.08□□□□□ -0.48
CSTF1-201ENST00000217109 CFAP44Q96MT7 982 aa12.08□□□□□ -0.48
CSTF1-201ENST00000217109 INSRP06213 1382 aa12.07□□□□□ -0.48
CSTF1-201ENST00000217109 TRMT2AQ8IZ69 625 aaKnown RBP12.07□□□□□ -0.48
CSTF1-201ENST00000217109 PHACTR3Q96KR7 559 aa12.07□□□□□ -0.48
CSTF1-201ENST00000217109 ERVK-7P63135 1459 aa12.07□□□□□ -0.48
CSTF1-201ENST00000217109 TRPM1Q7Z4N2 1603 aa12.07□□□□□ -0.48
CSTF1-201ENST00000217109 WASLO00401 505 aaPredicted RBP12.07□□□□□ -0.48
CSTF1-201ENST00000217109 NPATQ14207 1427 aa12.07□□□□□ -0.48
CSTF1-201ENST00000217109 GCC1Q96CN9 775 aa12.07□□□□□ -0.48
CSTF1-201ENST00000217109 POLKQ9UBT6 870 aa12.07□□□□□ -0.48
CSTF1-201ENST00000217109 DDX49Q9Y6V7 483 aaKnown RBP12.07□□□□□ -0.48
CSTF1-201ENST00000217109 NSD2O96028 1365 aa12.07□□□□□ -0.48
CSTF1-201ENST00000217109 CHD1O14646 1710 aa12.06□□□□□ -0.48
CSTF1-201ENST00000217109 ABCC1P33527 1531 aa12.06□□□□□ -0.48
CSTF1-201ENST00000217109 TRAK2O60296 914 aa12.06□□□□□ -0.48
CSTF1-201ENST00000217109 TBC1D32Q96NH3 1257 aa12.06□□□□□ -0.48
CSTF1-201ENST00000217109 ST18O60284 1047 aa12.06□□□□□ -0.48
CSTF1-201ENST00000217109 PLCB2Q00722 1185 aa12.06□□□□□ -0.48
CSTF1-201ENST00000217109 TSPYL6Q8N831 410 aa12.06□□□□□ -0.48
CSTF1-201ENST00000217109 CDC45O75419 566 aa12.05□□□□□ -0.48
CSTF1-201ENST00000217109 PTMAP06454 111 aaKnown RBP12.05□□□□□ -0.48
CSTF1-201ENST00000217109 ZNF692Q9BU19 519 aaPredicted RBP12.05□□□□□ -0.48
CSTF1-201ENST00000217109 ABCC11Q96J66 1382 aa12.05□□□□□ -0.48
CSTF1-201ENST00000217109 MBIPQ9NS73 344 aa12.05□□□□□ -0.48
CSTF1-201ENST00000217109 TRIM35Q9UPQ4 493 aa12.04□□□□□ -0.48
CSTF1-201ENST00000217109 ALDH1L2Q3SY69 923 aa12.04□□□□□ -0.48
CSTF1-201ENST00000217109 MCM4P33991 863 aa12.03□□□□□ -0.48
CSTF1-201ENST00000217109 TRPM2O94759 1503 aa12.03□□□□□ -0.48
CSTF1-201ENST00000217109 KIAA1211Q6ZU35 1233 aa12.03□□□□□ -0.48
CSTF1-201ENST00000217109 CEBPAP49715 358 aaPredicted RBP12.03□□□□□ -0.48
CSTF1-201ENST00000217109 INTS3Q68E01 1043 aaKnown RBP12.03□□□□□ -0.48
CSTF1-201ENST00000217109 ANO2Q9NQ90 1003 aa12.03□□□□□ -0.48
CSTF1-201ENST00000217109 IQGAP3Q86VI3 1631 aa12.02□□□□□ -0.48
CSTF1-201ENST00000217109 A0A0G2JS52 829 aa12.02□□□□□ -0.48
CSTF1-201ENST00000217109 SMARCA5O60264 1052 aaPredicted RBP12.02□□□□□ -0.48
CSTF1-201ENST00000217109 ZNF428Q96B54 188 aa12.02□□□□□ -0.48
CSTF1-201ENST00000217109 IFT57Q9NWB7 429 aa12.02□□□□□ -0.48
CSTF1-201ENST00000217109 AEBP1Q8IUX7 1158 aa12.02□□□□□ -0.49
CSTF1-201ENST00000217109 C8orf58Q8NAV2 365 aa12.02□□□□□ -0.49
CSTF1-201ENST00000217109 ZCCHC11Q5TAX3 1644 aaKnown RBP12.02□□□□□ -0.49
CSTF1-201ENST00000217109 REC8O95072 547 aa12.02□□□□□ -0.49
CSTF1-201ENST00000217109 KRT24Q2M2I5 525 aa12.01□□□□□ -0.49
CSTF1-201ENST00000217109 ABTB2Q8N961 1025 aa12.01□□□□□ -0.49
CSTF1-201ENST00000217109 F6X3S4 739 aa12.01□□□□□ -0.49
CSTF1-201ENST00000217109 HDAC1Q13547 482 aaPredicted RBP12.01□□□□□ -0.49
CSTF1-201ENST00000217109 TEFQ10587 303 aa12.01□□□□□ -0.49
CSTF1-201ENST00000217109 PUS7Q96PZ0 661 aaKnown RBP12.01□□□□□ -0.49
CSTF1-201ENST00000217109 IL16Q14005 1332 aa12□□□□□ -0.49
CSTF1-201ENST00000217109 HSP90AB2PQ58FF8 381 aa12□□□□□ -0.49
CSTF1-201ENST00000217109 ZBTB40Q9NUA8 1239 aa12□□□□□ -0.49
CSTF1-201ENST00000217109 MCTP1Q6DN14 999 aa12□□□□□ -0.49
CSTF1-201ENST00000217109 TAOK2Q9UL54 1235 aa12□□□□□ -0.49
CSTF1-201ENST00000217109 UHRF1BP1LA0JNW5 1464 aa12□□□□□ -0.49
CSTF1-201ENST00000217109 UNC13BO14795 1591 aa12□□□□□ -0.49
CSTF1-201ENST00000217109 ANO8Q9HCE9 1232 aaPredicted RBP12□□□□□ -0.49
CSTF1-201ENST00000217109 PLXNC1O60486 1568 aa11.99□□□□□ -0.49
CSTF1-201ENST00000217109 VAMP4O75379 141 aa11.99□□□□□ -0.49
CSTF1-201ENST00000217109 SBNO2Q9Y2G9 1366 aa11.99□□□□□ -0.49
CSTF1-201ENST00000217109 ZFYVE16Q7Z3T8 1539 aa11.99□□□□□ -0.49
CSTF1-201ENST00000217109 RBM33Q96EV2 1170 aaKnown RBP11.99□□□□□ -0.49
CSTF1-201ENST00000217109 EXOC6BQ9Y2D4 811 aa11.99□□□□□ -0.49
CSTF1-201ENST00000217109 CSB-PGBD3P0DP91 1061 aa11.98□□□□□ -0.49
CSTF1-201ENST00000217109 PSME1Q06323 249 aa11.98□□□□□ -0.49
CSTF1-201ENST00000217109 SYNMO15061 1565 aa11.98□□□□□ -0.49
CSTF1-201ENST00000217109 KDM5AP29375 1690 aaKnown RBP11.98□□□□□ -0.49
CSTF1-201ENST00000217109 YTHDC2Q9H6S0 1430 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms