RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 TNS3Q68CZ2 1445 aa27.82■■■□□ 2.04
RHBDD3-201ENST00000216085 EDC4Q6P2E9 1401 aaKnown RBP27.82■■■□□ 2.04
RHBDD3-201ENST00000216085 ARHGEF10O15013 1369 aa27.8■■■□□ 2.04
RHBDD3-201ENST00000216085 TRPM3Q9HCF6 1732 aaPredicted RBP27.8■■■□□ 2.04
RHBDD3-201ENST00000216085 SPATA31A3Q5VYP0 1347 aa27.79■■■□□ 2.04
RHBDD3-201ENST00000216085 TTC21AQ8NDW8 1320 aa27.79■■■□□ 2.04
RHBDD3-201ENST00000216085 LMOD2Q6P5Q4 547 aa27.78■■■□□ 2.04
RHBDD3-201ENST00000216085 PANK3Q9H999 370 aa27.78■■■□□ 2.04
RHBDD3-201ENST00000216085 JCADQ9P266 1359 aa27.78■■■□□ 2.04
RHBDD3-201ENST00000216085 NRKQ7Z2Y5 1582 aa27.77■■■□□ 2.04
RHBDD3-201ENST00000216085 TTC21BQ7Z4L5 1316 aa27.77■■■□□ 2.04
RHBDD3-201ENST00000216085 SSH2Q76I76 1423 aa27.76■■■□□ 2.03
RHBDD3-201ENST00000216085 ABTB2Q8N961 1025 aa27.75■■■□□ 2.03
RHBDD3-201ENST00000216085 NSD3Q9BZ95 1437 aa27.75■■■□□ 2.03
RHBDD3-201ENST00000216085 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.74■■■□□ 2.03
RHBDD3-201ENST00000216085 ALS2Q96Q42 1657 aa27.73■■■□□ 2.03
RHBDD3-201ENST00000216085 SHPRHQ149N8 1683 aa27.72■■■□□ 2.03
RHBDD3-201ENST00000216085 PNPLA6Q8IY17 1366 aa27.72■■■□□ 2.03
RHBDD3-201ENST00000216085 KNSTRNQ9Y448 316 aa27.71■■■□□ 2.03
RHBDD3-201ENST00000216085 CGNL1Q0VF96 1302 aa27.7■■■□□ 2.03
RHBDD3-201ENST00000216085 NLRP13Q86W25 1043 aa27.69■■■□□ 2.02
RHBDD3-201ENST00000216085 CARD14Q9BXL6 1004 aa27.69■■■□□ 2.02
RHBDD3-201ENST00000216085 ILDR1Q86SU0 546 aaPredicted RBP27.68■■■□□ 2.02
RHBDD3-201ENST00000216085 COL22A1Q8NFW1 1626 aaPredicted RBP27.67■■■□□ 2.02
RHBDD3-201ENST00000216085 NLRP6P59044 892 aa27.67■■■□□ 2.02
RHBDD3-201ENST00000216085 PIK3C2AO00443 1686 aa27.67■■■□□ 2.02
RHBDD3-201ENST00000216085 SPATA31A6Q5VVP1 1343 aa27.66■■■□□ 2.02
RHBDD3-201ENST00000216085 HAP1P54257 671 aaPredicted RBP27.65■■■□□ 2.02
RHBDD3-201ENST00000216085 MED1Q15648 1581 aaPredicted RBP27.65■■■□□ 2.02
RHBDD3-201ENST00000216085 NME9Q86XW9 330 aa27.65■■■□□ 2.02
RHBDD3-201ENST00000216085 NUTM2GQ5VZR2 741 aa27.64■■■□□ 2.02
RHBDD3-201ENST00000216085 KIF20BQ96Q89 1820 aa27.64■■■□□ 2.01
RHBDD3-201ENST00000216085 DDX10Q13206 875 aaKnown RBP27.63■■■□□ 2.01
RHBDD3-201ENST00000216085 NSD2O96028 1365 aa27.63■■■□□ 2.01
RHBDD3-201ENST00000216085 USP31Q70CQ4 1352 aa27.63■■■□□ 2.01
RHBDD3-201ENST00000216085 COG3Q96JB2 828 aa27.63■■■□□ 2.01
RHBDD3-201ENST00000216085 PLEKHG5O94827 1062 aa27.6■■■□□ 2.01
RHBDD3-201ENST00000216085 FYB1O15117 783 aa27.6■■■□□ 2.01
RHBDD3-201ENST00000216085 USP19O94966 1318 aa27.59■■■□□ 2.01
RHBDD3-201ENST00000216085 USP54Q70EL1 1684 aa27.59■■■□□ 2.01
RHBDD3-201ENST00000216085 GGNBP2Q9H3C7 697 aa27.58■■■□□ 2.01
RHBDD3-201ENST00000216085 OVOS2A0A0J9YW53 1432 aa27.58■■■□□ 2.01
RHBDD3-201ENST00000216085 OVOS2Q6IE36 1432 aa27.58■■■□□ 2.01
RHBDD3-201ENST00000216085 PER1O15534 1290 aaPredicted RBP27.58■■■□□ 2
RHBDD3-201ENST00000216085 KCNH5Q8NCM2 988 aa27.58■■■□□ 2
RHBDD3-201ENST00000216085 NUTM2BA6NNL0 878 aaPredicted RBP27.56■■■□□ 2
RHBDD3-201ENST00000216085 NUTM2EB1AL46 878 aaPredicted RBP27.56■■■□□ 2
RHBDD3-201ENST00000216085 NUTM2AQ8IVF1 878 aaPredicted RBP27.56■■■□□ 2
RHBDD3-201ENST00000216085 CABLES1Q8TDN4 633 aa27.55■■■□□ 2
RHBDD3-201ENST00000216085 PHRF1Q9P1Y6 1649 aaKnown RBP27.55■■■□□ 2
RHBDD3-201ENST00000216085 ABCA3Q99758 1704 aa27.55■■■□□ 2
RHBDD3-201ENST00000216085 SLIT3O75094 1523 aa27.55■■■□□ 2
RHBDD3-201ENST00000216085 ZRANB1Q9UGI0 708 aa27.54■■■□□ 2
RHBDD3-201ENST00000216085 CRYBG1Q9Y4K1 1723 aa27.54■■■□□ 2
RHBDD3-201ENST00000216085 NPC1L1Q9UHC9 1359 aa27.54■■■□□ 2
RHBDD3-201ENST00000216085 AMER1Q5JTC6 1135 aaPredicted RBP27.53■■■□□ 2
RHBDD3-201ENST00000216085 ANKRD26Q9UPS8 1709 aa27.52■■■□□ 2
RHBDD3-201ENST00000216085 GCP02774 474 aa27.52■■■□□ 2
RHBDD3-201ENST00000216085 MEX3CQ5U5Q3 659 aaKnown RBP27.51■■□□□ 1.99
RHBDD3-201ENST00000216085 MARF1Q9Y4F3 1742 aaKnown RBP27.51■■□□□ 1.99
RHBDD3-201ENST00000216085 SOX12O15370 315 aa27.49■■□□□ 1.99
RHBDD3-201ENST00000216085 MORC1Q86VD1 984 aa27.49■■□□□ 1.99
RHBDD3-201ENST00000216085 ADAMTS2O95450 1211 aa27.48■■□□□ 1.99
RHBDD3-201ENST00000216085 CC2D1BQ5T0F9 858 aaKnown RBP27.48■■□□□ 1.99
RHBDD3-201ENST00000216085 LRP6O75581 1613 aa27.46■■□□□ 1.99
RHBDD3-201ENST00000216085 CPDO75976 1380 aa27.46■■□□□ 1.99
RHBDD3-201ENST00000216085 PRDM11Q9NQV5 511 aa27.45■■□□□ 1.99
RHBDD3-201ENST00000216085 ZC3H6P61129 1189 aaKnown RBP27.45■■□□□ 1.98
RHBDD3-201ENST00000216085 NFAT5O94916 1531 aa27.45■■□□□ 1.98
RHBDD3-201ENST00000216085 KIAA0232Q92628 1395 aa27.44■■□□□ 1.98
RHBDD3-201ENST00000216085 CNGB1Q14028 1251 aaPredicted RBP27.43■■□□□ 1.98
RHBDD3-201ENST00000216085 ZBTB7CA1YPR0 619 aa27.41■■□□□ 1.98
RHBDD3-201ENST00000216085 AATKQ6ZMQ8 1374 aa27.41■■□□□ 1.98
RHBDD3-201ENST00000216085 C8orf37Q96NL8 207 aa27.4■■□□□ 1.98
RHBDD3-201ENST00000216085 TNNT2P45379 298 aaPredicted RBP27.4■■□□□ 1.98
RHBDD3-201ENST00000216085 ARHGEF25Q86VW2 580 aa27.39■■□□□ 1.98
RHBDD3-201ENST00000216085 NGLY1Q96IV0 654 aa27.39■■□□□ 1.98
RHBDD3-201ENST00000216085 COL14A1Q05707 1796 aaKnown RBP27.39■■□□□ 1.97
RHBDD3-201ENST00000216085 ABCC6O95255 1503 aa27.37■■□□□ 1.97
RHBDD3-201ENST00000216085 LTN1O94822 1766 aa27.36■■□□□ 1.97
RHBDD3-201ENST00000216085 AMPHP49418 695 aa27.35■■□□□ 1.97
RHBDD3-201ENST00000216085 RTL1A6NKG5 1358 aa27.35■■□□□ 1.97
RHBDD3-201ENST00000216085 KIF24Q5T7B8 1368 aa27.35■■□□□ 1.97
RHBDD3-201ENST00000216085 CHRNA2Q15822 529 aa27.35■■□□□ 1.97
RHBDD3-201ENST00000216085 MAP3K19Q56UN5 1328 aa27.34■■□□□ 1.97
RHBDD3-201ENST00000216085 FAM83GA6ND36 823 aa27.34■■□□□ 1.97
RHBDD3-201ENST00000216085 RRS1Q15050 365 aaKnown RBP27.34■■□□□ 1.97
RHBDD3-201ENST00000216085 RALBP1Q15311 655 aa27.34■■□□□ 1.97
RHBDD3-201ENST00000216085 PARD3Q8TEW0 1356 aa27.32■■□□□ 1.96
RHBDD3-201ENST00000216085 PLCH1Q4KWH8 1693 aa27.32■■□□□ 1.96
RHBDD3-201ENST00000216085 FBLN1P23142 703 aa27.31■■□□□ 1.96
RHBDD3-201ENST00000216085 PHF23Q9BUL5 403 aaPredicted RBP27.31■■□□□ 1.96
RHBDD3-201ENST00000216085 FLT4P35916 1363 aa27.31■■□□□ 1.96
RHBDD3-201ENST00000216085 PPM1GO15355 546 aaPredicted RBP27.3■■□□□ 1.96
RHBDD3-201ENST00000216085 BTG4Q9NY30 223 aa27.3■■□□□ 1.96
RHBDD3-201ENST00000216085 BLMP54132 1417 aaPredicted RBP27.3■■□□□ 1.96
RHBDD3-201ENST00000216085 NWD2Q9ULI1 1742 aa27.3■■□□□ 1.96
RHBDD3-201ENST00000216085 FNBP4Q8N3X1 1017 aaPredicted RBP27.3■■□□□ 1.96
RHBDD3-201ENST00000216085 MAP2P11137 1827 aaKnown RBP27.29■■□□□ 1.96
RHBDD3-201ENST00000216085 SLIT2O94813 1529 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms