RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 IQSEC2Q5JU85 1478 aa20.75■□□□□ 0.91
LAPTM4A-201ENST00000175091 NUTM2FA1L443 756 aa20.74■□□□□ 0.91
LAPTM4A-201ENST00000175091 PNPLA6Q8IY17 1366 aa20.74■□□□□ 0.91
LAPTM4A-201ENST00000175091 OVOS2A0A0J9YW53 1432 aa20.74■□□□□ 0.91
LAPTM4A-201ENST00000175091 OVOS2Q6IE36 1432 aa20.74■□□□□ 0.91
LAPTM4A-201ENST00000175091 NME9Q86XW9 330 aa20.74■□□□□ 0.91
LAPTM4A-201ENST00000175091 NEFLP07196 543 aa20.73■□□□□ 0.91
LAPTM4A-201ENST00000175091 SALL2Q9Y467 1007 aaPredicted RBP20.73■□□□□ 0.91
LAPTM4A-201ENST00000175091 AATKQ6ZMQ8 1374 aa20.73■□□□□ 0.91
LAPTM4A-201ENST00000175091 CDK12Q9NYV4 1490 aaPredicted RBP20.72■□□□□ 0.91
LAPTM4A-201ENST00000175091 USP54Q70EL1 1684 aa20.72■□□□□ 0.91
LAPTM4A-201ENST00000175091 TTC21BQ7Z4L5 1316 aa20.72■□□□□ 0.91
LAPTM4A-201ENST00000175091 ZNF521Q96K83 1311 aa20.72■□□□□ 0.91
LAPTM4A-201ENST00000175091 PIK3C2AO00443 1686 aa20.71■□□□□ 0.91
LAPTM4A-201ENST00000175091 CCDC146Q8IYE0 955 aa20.71■□□□□ 0.91
LAPTM4A-201ENST00000175091 FKBP8Q14318 412 aa20.7■□□□□ 0.9
LAPTM4A-201ENST00000175091 LMTK3Q96Q04 1460 aa20.7■□□□□ 0.9
LAPTM4A-201ENST00000175091 STRCP1A6NGW2 1772 aa20.7■□□□□ 0.9
LAPTM4A-201ENST00000175091 KDM4FA0A1W2PPD8 638 aa20.69■□□□□ 0.9
LAPTM4A-201ENST00000175091 COG3Q96JB2 828 aa20.68■□□□□ 0.9
LAPTM4A-201ENST00000175091 MARF1Q9Y4F3 1742 aaKnown RBP20.68■□□□□ 0.9
LAPTM4A-201ENST00000175091 ZRANB1Q9UGI0 708 aa20.67■□□□□ 0.9
LAPTM4A-201ENST00000175091 LRRC7Q96NW7 1537 aa20.67■□□□□ 0.9
LAPTM4A-201ENST00000175091 TTC21AQ8NDW8 1320 aa20.67■□□□□ 0.9
LAPTM4A-201ENST00000175091 APAF1O14727 1248 aa20.67■□□□□ 0.9
LAPTM4A-201ENST00000175091 POLKQ9UBT6 870 aa20.67■□□□□ 0.9
LAPTM4A-201ENST00000175091 NGEFQ8N5V2 710 aa20.66■□□□□ 0.9
LAPTM4A-201ENST00000175091 PMFBP1Q8TBY8 1022 aa20.66■□□□□ 0.9
LAPTM4A-201ENST00000175091 STRCQ7RTU9 1775 aa20.65■□□□□ 0.9
LAPTM4A-201ENST00000175091 CDCA7LQ96GN5 454 aa20.65■□□□□ 0.9
LAPTM4A-201ENST00000175091 RUNDC1Q96C34 613 aa20.64■□□□□ 0.9
LAPTM4A-201ENST00000175091 RNF123Q5XPI4 1314 aa20.64■□□□□ 0.89
LAPTM4A-201ENST00000175091 USP31Q70CQ4 1352 aa20.63■□□□□ 0.89
LAPTM4A-201ENST00000175091 NGDNQ8NEJ9 315 aaKnown RBP20.63■□□□□ 0.89
LAPTM4A-201ENST00000175091 RBM33Q96EV2 1170 aaKnown RBP20.62■□□□□ 0.89
LAPTM4A-201ENST00000175091 PEAK1Q9H792 1746 aa20.62■□□□□ 0.89
LAPTM4A-201ENST00000175091 DIAPH1O60610 1272 aaKnown RBP20.62■□□□□ 0.89
LAPTM4A-201ENST00000175091 U2AF1L5P0DN76 240 aaPredicted RBP20.62■□□□□ 0.89
LAPTM4A-201ENST00000175091 FBLN1P23142 703 aa20.62■□□□□ 0.89
LAPTM4A-201ENST00000175091 U2AF1Q01081 240 aaKnown RBP eCLIP20.62■□□□□ 0.89
LAPTM4A-201ENST00000175091 EMILIN1Q9Y6C2 1016 aa20.62■□□□□ 0.89
LAPTM4A-201ENST00000175091 HSPA2P54652 639 aa20.6■□□□□ 0.89
LAPTM4A-201ENST00000175091 KIF1AQ12756 1690 aa20.6■□□□□ 0.89
LAPTM4A-201ENST00000175091 GOLGA2Q08379 1002 aa20.59■□□□□ 0.89
LAPTM4A-201ENST00000175091 U2SURPO15042 1029 aaKnown RBP20.57■□□□□ 0.88
LAPTM4A-201ENST00000175091 NCBP3Q53F19 620 aaKnown RBP20.57■□□□□ 0.88
LAPTM4A-201ENST00000175091 TCP11L2Q8N4U5 519 aa20.57■□□□□ 0.88
LAPTM4A-201ENST00000175091 PHF23Q9BUL5 403 aaPredicted RBP20.57■□□□□ 0.88
LAPTM4A-201ENST00000175091 PHF8Q9UPP1 1060 aa20.57■□□□□ 0.88
LAPTM4A-201ENST00000175091 DCCP43146 1447 aa20.57■□□□□ 0.88
LAPTM4A-201ENST00000175091 NCOA3Q9Y6Q9 1424 aa20.57■□□□□ 0.88
LAPTM4A-201ENST00000175091 RRS1Q15050 365 aaKnown RBP20.57■□□□□ 0.88
LAPTM4A-201ENST00000175091 PPM1GO15355 546 aaPredicted RBP20.56■□□□□ 0.88
LAPTM4A-201ENST00000175091 DUSP27Q5VZP5 1158 aa20.56■□□□□ 0.88
LAPTM4A-201ENST00000175091 PLEKHF1Q96S99 279 aa20.56■□□□□ 0.88
LAPTM4A-201ENST00000175091 RGPD1P0DJD0 1748 aa20.56■□□□□ 0.88
LAPTM4A-201ENST00000175091 XIRP1Q702N8 1843 aaKnown RBP20.56■□□□□ 0.88
LAPTM4A-201ENST00000175091 IRX6P78412 446 aaPredicted RBP20.55■□□□□ 0.88
LAPTM4A-201ENST00000175091 ERICH6BQ5W0A0 696 aa20.55■□□□□ 0.88
LAPTM4A-201ENST00000175091 C14orf37Q86TY3 774 aa20.55■□□□□ 0.88
LAPTM4A-201ENST00000175091 PROSER2Q86WR7 435 aaPredicted RBP20.55■□□□□ 0.88
LAPTM4A-201ENST00000175091 SLFN5Q08AF3 891 aa20.54■□□□□ 0.88
LAPTM4A-201ENST00000175091 TRMT2AQ8IZ69 625 aaKnown RBP20.54■□□□□ 0.88
LAPTM4A-201ENST00000175091 RCAN3Q9UKA8 241 aa20.54■□□□□ 0.88
LAPTM4A-201ENST00000175091 CCDC27Q2M243 656 aa20.54■□□□□ 0.88
LAPTM4A-201ENST00000175091 WWC1Q8IX03 1113 aa20.54■□□□□ 0.88
LAPTM4A-201ENST00000175091 TRPM3Q9HCF6 1732 aaPredicted RBP20.54■□□□□ 0.88
LAPTM4A-201ENST00000175091 IL13P35225 146 aa20.53■□□□□ 0.88
LAPTM4A-201ENST00000175091 TMEM94Q12767 1356 aa20.53■□□□□ 0.88
LAPTM4A-201ENST00000175091 C1orf167Q5SNV9 1468 aa20.51■□□□□ 0.87
LAPTM4A-201ENST00000175091 E9PSI1 815 aa20.51■□□□□ 0.87
LAPTM4A-201ENST00000175091 SPINK5Q9NQ38 1064 aaPredicted RBP20.51■□□□□ 0.87
LAPTM4A-201ENST00000175091 RRP7AQ9Y3A4 280 aaKnown RBP20.51■□□□□ 0.87
LAPTM4A-201ENST00000175091 DMRT2Q9Y5R5 561 aa20.51■□□□□ 0.87
LAPTM4A-201ENST00000175091 MST1RQ04912 1400 aa20.5■□□□□ 0.87
LAPTM4A-201ENST00000175091 MAPK8IP3Q9UPT6 1336 aa20.5■□□□□ 0.87
LAPTM4A-201ENST00000175091 FCHSD2O94868 740 aa20.5■□□□□ 0.87
LAPTM4A-201ENST00000175091 ESCO1Q5FWF5 840 aa20.5■□□□□ 0.87
LAPTM4A-201ENST00000175091 RSPH6AQ9H0K4 717 aa20.5■□□□□ 0.87
LAPTM4A-201ENST00000175091 C19orf44Q9H6X5 657 aa20.5■□□□□ 0.87
LAPTM4A-201ENST00000175091 LTN1O94822 1766 aa20.49■□□□□ 0.87
LAPTM4A-201ENST00000175091 PNNQ9H307 717 aaKnown RBP20.49■□□□□ 0.87
LAPTM4A-201ENST00000175091 RRP1P56182 461 aaKnown RBP20.49■□□□□ 0.87
LAPTM4A-201ENST00000175091 SBNO1A3KN83 1393 aa20.48■□□□□ 0.87
LAPTM4A-201ENST00000175091 NEUROD2Q15784 382 aa20.48■□□□□ 0.87
LAPTM4A-201ENST00000175091 FLT4P35916 1363 aa20.48■□□□□ 0.87
LAPTM4A-201ENST00000175091 NFAT5O94916 1531 aa20.47■□□□□ 0.87
LAPTM4A-201ENST00000175091 PHRF1Q9P1Y6 1649 aaKnown RBP20.47■□□□□ 0.87
LAPTM4A-201ENST00000175091 KIF24Q5T7B8 1368 aa20.47■□□□□ 0.87
LAPTM4A-201ENST00000175091 MAP3K19Q56UN5 1328 aa20.47■□□□□ 0.87
LAPTM4A-201ENST00000175091 WDR63Q8IWG1 891 aa20.46■□□□□ 0.87
LAPTM4A-201ENST00000175091 DLG5Q8TDM6 1919 aa20.46■□□□□ 0.87
LAPTM4A-201ENST00000175091 TMPOP42166 694 aaKnown RBP20.46■□□□□ 0.87
LAPTM4A-201ENST00000175091 NLRP6P59044 892 aa20.46■□□□□ 0.87
LAPTM4A-201ENST00000175091 ORAI2Q96SN7 254 aa20.46■□□□□ 0.87
LAPTM4A-201ENST00000175091 PRKAR2BP31323 418 aa20.45■□□□□ 0.86
LAPTM4A-201ENST00000175091 ABTB2Q8N961 1025 aa20.45■□□□□ 0.86
LAPTM4A-201ENST00000175091 ALS2Q96Q42 1657 aa20.45■□□□□ 0.86
LAPTM4A-201ENST00000175091 EIF4A2Q14240 407 aaKnown RBP20.44■□□□□ 0.86
LAPTM4A-201ENST00000175091 SLIT3O75094 1523 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms