RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 TRDNQ13061 729 aa13.98□□□□□ -0.17
PKP2-201ENST00000070846 CPLX2Q6PUV4 134 aaKnown RBP13.98□□□□□ -0.17
PKP2-201ENST00000070846 MPRIPQ6WCQ1 1025 aa13.98□□□□□ -0.17
PKP2-201ENST00000070846 ANO2Q9NQ90 1003 aa13.98□□□□□ -0.17
PKP2-201ENST00000070846 GPATCH8Q9UKJ3 1502 aaKnown RBP13.98□□□□□ -0.17
PKP2-201ENST00000070846 NSD3Q9BZ95 1437 aa13.97□□□□□ -0.17
PKP2-201ENST00000070846 BTBD11A6QL63 1104 aa13.97□□□□□ -0.17
PKP2-201ENST00000070846 FOXD4L5Q5VV16 416 aaPredicted RBP13.97□□□□□ -0.17
PKP2-201ENST00000070846 FOXD4L4Q8WXT5 416 aaPredicted RBP13.97□□□□□ -0.17
PKP2-201ENST00000070846 EMILIN1Q9Y6C2 1016 aa13.97□□□□□ -0.17
PKP2-201ENST00000070846 NOS1P29475 1434 aa13.97□□□□□ -0.17
PKP2-201ENST00000070846 THUMPD2Q9BTF0 503 aaKnown RBP13.97□□□□□ -0.17
PKP2-201ENST00000070846 SF3A1Q15459 793 aaKnown RBP13.96□□□□□ -0.17
PKP2-201ENST00000070846 CNNM1Q9NRU3 951 aa13.96□□□□□ -0.17
PKP2-201ENST00000070846 GOLGA6L6A8MZA4 724 aa13.96□□□□□ -0.18
PKP2-201ENST00000070846 FCHSD2O94868 740 aa13.96□□□□□ -0.18
PKP2-201ENST00000070846 CCDC34Q96HJ3 373 aa13.96□□□□□ -0.18
PKP2-201ENST00000070846 MIS18AQ9NYP9 233 aa13.96□□□□□ -0.18
PKP2-201ENST00000070846 RBM19Q9Y4C8 960 aaKnown RBP13.96□□□□□ -0.18
PKP2-201ENST00000070846 EXOC5O00471 708 aa13.95□□□□□ -0.18
PKP2-201ENST00000070846 GBP4Q96PP9 640 aa13.95□□□□□ -0.18
PKP2-201ENST00000070846 C14orf93Q9H972 538 aaKnown RBP13.95□□□□□ -0.18
PKP2-201ENST00000070846 FAM184AQ8NB25 1140 aa13.95□□□□□ -0.18
PKP2-201ENST00000070846 MSH6P52701 1360 aa13.95□□□□□ -0.18
PKP2-201ENST00000070846 ERC2O15083 957 aa13.95□□□□□ -0.18
PKP2-201ENST00000070846 TMOD3Q9NYL9 352 aa13.94□□□□□ -0.18
PKP2-201ENST00000070846 DCTN1Q14203 1278 aa13.94□□□□□ -0.18
PKP2-201ENST00000070846 FAM161AQ3B820 660 aa13.94□□□□□ -0.18
PKP2-201ENST00000070846 CCDC85AQ96PX6 553 aaPredicted RBP13.94□□□□□ -0.18
PKP2-201ENST00000070846 WDR7Q9Y4E6 1490 aa13.94□□□□□ -0.18
PKP2-201ENST00000070846 THOC2Q8NI27 1593 aaKnown RBP13.94□□□□□ -0.18
PKP2-201ENST00000070846 REC8O95072 547 aa13.94□□□□□ -0.18
PKP2-201ENST00000070846 STARD3NLO95772 234 aa13.93□□□□□ -0.18
PKP2-201ENST00000070846 FOXD4L6Q3SYB3 417 aaPredicted RBP13.93□□□□□ -0.18
PKP2-201ENST00000070846 FOXD4L3Q6VB84 417 aaPredicted RBP13.93□□□□□ -0.18
PKP2-201ENST00000070846 MCM10Q7L590 875 aa13.93□□□□□ -0.18
PKP2-201ENST00000070846 MPHOSPH8Q99549 860 aa13.93□□□□□ -0.18
PKP2-201ENST00000070846 KAT6BQ8WYB5 2073 aa13.93□□□□□ -0.18
PKP2-201ENST00000070846 CPLX1O14810 134 aa13.93□□□□□ -0.18
PKP2-201ENST00000070846 GZF1Q9H116 711 aaPredicted RBP13.93□□□□□ -0.18
PKP2-201ENST00000070846 KDM5BQ9UGL1 1544 aa13.93□□□□□ -0.18
PKP2-201ENST00000070846 UHRF1BP1LA0JNW5 1464 aa13.93□□□□□ -0.18
PKP2-201ENST00000070846 ACEP12821 1306 aa13.93□□□□□ -0.18
PKP2-201ENST00000070846 GNAT3A8MTJ3 354 aa13.93□□□□□ -0.18
PKP2-201ENST00000070846 SRCIN1Q9C0H9 1055 aa13.93□□□□□ -0.18
PKP2-201ENST00000070846 DRC7Q8IY82 874 aa13.92□□□□□ -0.18
PKP2-201ENST00000070846 A2MP01023 1474 aa13.92□□□□□ -0.18
PKP2-201ENST00000070846 H3BQV1 296 aa13.92□□□□□ -0.18
PKP2-201ENST00000070846 IFFO2Q5TF58 517 aa13.92□□□□□ -0.18
PKP2-201ENST00000070846 SIL1Q9H173 461 aa13.92□□□□□ -0.18
PKP2-201ENST00000070846 C1orf115Q9H7X2 142 aa13.92□□□□□ -0.18
PKP2-201ENST00000070846 TRAPPC8Q9Y2L5 1435 aa13.92□□□□□ -0.18
PKP2-201ENST00000070846 MTMR7Q9Y216 660 aa13.92□□□□□ -0.18
PKP2-201ENST00000070846 NUP153P49790 1475 aaKnown RBP13.91□□□□□ -0.18
PKP2-201ENST00000070846 NCKAP5LQ9HCH0 1330 aa13.91□□□□□ -0.18
PKP2-201ENST00000070846 CWC22Q9HCG8 908 aaKnown RBP13.91□□□□□ -0.18
PKP2-201ENST00000070846 LRPPRCP42704 1394 aaKnown RBP13.91□□□□□ -0.18
PKP2-201ENST00000070846 NFE2L2Q16236 605 aa13.91□□□□□ -0.18
PKP2-201ENST00000070846 MCTP1Q6DN14 999 aa13.91□□□□□ -0.18
PKP2-201ENST00000070846 CREBRFQ8IUR6 639 aa13.91□□□□□ -0.18
PKP2-201ENST00000070846 RNF20Q5VTR2 975 aa13.9□□□□□ -0.18
PKP2-201ENST00000070846 FAM135AQ9P2D6 1515 aa13.9□□□□□ -0.18
PKP2-201ENST00000070846 PTPN23Q9H3S7 1636 aa13.9□□□□□ -0.18
PKP2-201ENST00000070846 FBLN1P23142 703 aa13.9□□□□□ -0.18
PKP2-201ENST00000070846 TMPOP42166 694 aaKnown RBP13.9□□□□□ -0.18
PKP2-201ENST00000070846 DNAJC2Q99543 621 aaKnown RBP13.9□□□□□ -0.18
PKP2-201ENST00000070846 TBC1D2BQ9UPU7 963 aa13.9□□□□□ -0.18
PKP2-201ENST00000070846 NPHP3Q7Z494 1330 aa13.9□□□□□ -0.18
PKP2-201ENST00000070846 NFXL1Q6ZNB6 911 aa13.9□□□□□ -0.18
PKP2-201ENST00000070846 RALYLQ86SE5 291 aaKnown RBP13.9□□□□□ -0.18
PKP2-201ENST00000070846 CCDC57Q2TAC2 916 aa13.89□□□□□ -0.19
PKP2-201ENST00000070846 C8orf37Q96NL8 207 aa13.89□□□□□ -0.19
PKP2-201ENST00000070846 GNAI2P04899 355 aa13.89□□□□□ -0.19
PKP2-201ENST00000070846 FSD1Q9BTV5 496 aa13.89□□□□□ -0.19
PKP2-201ENST00000070846 NOB1Q9ULX3 412 aaKnown RBP13.89□□□□□ -0.19
PKP2-201ENST00000070846 ZNF518AQ6AHZ1 1483 aa13.89□□□□□ -0.19
PKP2-201ENST00000070846 BCAR3O75815 825 aa13.89□□□□□ -0.19
PKP2-201ENST00000070846 CABLES1Q8TDN4 633 aa13.88□□□□□ -0.19
PKP2-201ENST00000070846 C19orf44Q9H6X5 657 aa13.88□□□□□ -0.19
PKP2-201ENST00000070846 ERICH2A1L162 156 aa13.88□□□□□ -0.19
PKP2-201ENST00000070846 AMOTQ4VCS5 1084 aa13.88□□□□□ -0.19
PKP2-201ENST00000070846 CCDC184Q52MB2 194 aa13.88□□□□□ -0.19
PKP2-201ENST00000070846 TCEAL9Q9UHQ7 104 aa13.88□□□□□ -0.19
PKP2-201ENST00000070846 KCNA6P17658 529 aa13.88□□□□□ -0.19
PKP2-201ENST00000070846 C11orf95C9JLR9 678 aaPredicted RBP13.87□□□□□ -0.19
PKP2-201ENST00000070846 ZPR1O75312 459 aa13.87□□□□□ -0.19
PKP2-201ENST00000070846 ZMYM3Q14202 1370 aa13.87□□□□□ -0.19
PKP2-201ENST00000070846 PDE4AP27815 886 aa13.87□□□□□ -0.19
PKP2-201ENST00000070846 CHMP4CQ96CF2 233 aa13.87□□□□□ -0.19
PKP2-201ENST00000070846 IKQ13123 557 aaPredicted RBP13.86□□□□□ -0.19
PKP2-201ENST00000070846 WDR63Q8IWG1 891 aa13.86□□□□□ -0.19
PKP2-201ENST00000070846 BCL11BQ9C0K0 894 aaPredicted RBP13.86□□□□□ -0.19
PKP2-201ENST00000070846 TRIM29Q14134 588 aa13.85□□□□□ -0.19
PKP2-201ENST00000070846 DUSP27Q5VZP5 1158 aa13.85□□□□□ -0.19
PKP2-201ENST00000070846 GNL3LQ9NVN8 582 aaKnown RBP13.85□□□□□ -0.19
PKP2-201ENST00000070846 CEP126Q9P2H0 1117 aa13.85□□□□□ -0.19
PKP2-201ENST00000070846 BIVM-ERCC5R4GMW8 1640 aa13.85□□□□□ -0.19
PKP2-201ENST00000070846 CCT4P50991 539 aaKnown RBP13.85□□□□□ -0.19
PKP2-201ENST00000070846 SLC4A3P48751 1232 aa13.85□□□□□ -0.19
PKP2-201ENST00000070846 TAF7Q15545 349 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms