RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 AEBP2Q6ZN18 517 aaPredicted RBP15.18■□□□□ 0.02
CHPF2-201ENST00000035307 NOL8Q76FK4 1167 aaKnown RBP15.18■□□□□ 0.02
CHPF2-201ENST00000035307 IPO8O15397 1037 aaKnown RBP15.17■□□□□ 0.02
CHPF2-201ENST00000035307 DNAJC5Q9H3Z4 198 aa15.17■□□□□ 0.02
CHPF2-201ENST00000035307 A0A1W2PP64 1363 aa15.17■□□□□ 0.02
CHPF2-201ENST00000035307 GPRASP1Q5JY77 1395 aa15.17■□□□□ 0.02
CHPF2-201ENST00000035307 MS4A1P11836 297 aa15.17■□□□□ 0.02
CHPF2-201ENST00000035307 OS9Q13438 667 aaPredicted RBP15.17■□□□□ 0.02
CHPF2-201ENST00000035307 FAM161AQ3B820 660 aa15.17■□□□□ 0.02
CHPF2-201ENST00000035307 ZNF692Q9BU19 519 aaPredicted RBP15.17■□□□□ 0.02
CHPF2-201ENST00000035307 HSCBQ8IWL3 235 aa15.17■□□□□ 0.02
CHPF2-201ENST00000035307 TSPYL4Q9UJ04 414 aa15.17■□□□□ 0.02
CHPF2-201ENST00000035307 TMPOP42166 694 aaKnown RBP15.17■□□□□ 0.02
CHPF2-201ENST00000035307 STK31Q9BXU1 1019 aa15.15■□□□□ 0.02
CHPF2-201ENST00000035307 PRKCSHP14314 528 aaPredicted RBP15.15■□□□□ 0.02
CHPF2-201ENST00000035307 AIMP1Q12904 312 aaKnown RBP15.15■□□□□ 0.02
CHPF2-201ENST00000035307 ANKRD45Q5TZF3 282 aa15.15■□□□□ 0.02
CHPF2-201ENST00000035307 ZKSCAN2Q63HK3 967 aa15.15■□□□□ 0.02
CHPF2-201ENST00000035307 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.14■□□□□ 0.01
CHPF2-201ENST00000035307 C1orf141Q5JVX7 400 aa15.14■□□□□ 0.01
CHPF2-201ENST00000035307 DDX54Q8TDD1 881 aaKnown RBP15.14■□□□□ 0.01
CHPF2-201ENST00000035307 LNPKQ9C0E8 428 aa15.14■□□□□ 0.01
CHPF2-201ENST00000035307 POLKQ9UBT6 870 aa15.14■□□□□ 0.01
CHPF2-201ENST00000035307 TNNQ9UQP3 1299 aa15.14■□□□□ 0.01
CHPF2-201ENST00000035307 PPIP5K1Q6PFW1 1433 aa15.14■□□□□ 0.01
CHPF2-201ENST00000035307 FOXD4L5Q5VV16 416 aaPredicted RBP15.13■□□□□ 0.01
CHPF2-201ENST00000035307 FOXD4L4Q8WXT5 416 aaPredicted RBP15.13■□□□□ 0.01
CHPF2-201ENST00000035307 HECW2Q9P2P5 1572 aa15.13■□□□□ 0.01
CHPF2-201ENST00000035307 PHACTR3Q96KR7 559 aa15.13■□□□□ 0.01
CHPF2-201ENST00000035307 LRRC59Q96AG4 307 aaKnown RBP15.12■□□□□ 0.01
CHPF2-201ENST00000035307 ADAMTS2O95450 1211 aa15.12■□□□□ 0.01
CHPF2-201ENST00000035307 RAPGEF4Q8WZA2 1011 aa15.12■□□□□ 0.01
CHPF2-201ENST00000035307 PRDM11Q9NQV5 511 aa15.12■□□□□ 0.01
CHPF2-201ENST00000035307 TTC21BQ7Z4L5 1316 aa15.11■□□□□ 0.01
CHPF2-201ENST00000035307 KRT24Q2M2I5 525 aa15.11■□□□□ 0.01
CHPF2-201ENST00000035307 PLCB2Q00722 1185 aa15.11■□□□□ 0.01
CHPF2-201ENST00000035307 SMG6Q86US8 1419 aaKnown RBP15.11■□□□□ 0.01
CHPF2-201ENST00000035307 PARD3Q8TEW0 1356 aa15.11■□□□□ 0.01
CHPF2-201ENST00000035307 KRT28Q7Z3Y7 464 aa15.1■□□□□ 0.01
CHPF2-201ENST00000035307 TMEM2Q9UHN6 1383 aa15.1■□□□□ 0.01
CHPF2-201ENST00000035307 ABCA9Q8IUA7 1624 aa15.1■□□□□ 0.01
CHPF2-201ENST00000035307 DZIP1LQ8IYY4 767 aaKnown RBP15.1■□□□□ 0.01
CHPF2-201ENST00000035307 TRIM44Q96DX7 344 aaPredicted RBP15.1■□□□□ 0.01
CHPF2-201ENST00000035307 MAGI2Q86UL8 1455 aa15.1■□□□□ 0.01
CHPF2-201ENST00000035307 CALD1Q05682 793 aaKnown RBP15.1■□□□□ 0.01
CHPF2-201ENST00000035307 SLFN5Q08AF3 891 aa15.1■□□□□ 0.01
CHPF2-201ENST00000035307 FKBP5Q13451 457 aaPredicted RBP15.1■□□□□ 0.01
CHPF2-201ENST00000035307 CHMP3Q9Y3E7 222 aa15.1■□□□□ 0.01
CHPF2-201ENST00000035307 GOLGA6L22H0YM25 854 aa15.09■□□□□ 0.01
CHPF2-201ENST00000035307 ABCC3O15438 1527 aa15.09■□□□□ 0.01
CHPF2-201ENST00000035307 LMOD3Q0VAK6 560 aa15.09■□□□□ 0.01
CHPF2-201ENST00000035307 FOXD4L6Q3SYB3 417 aaPredicted RBP15.09■□□□□ 0.01
CHPF2-201ENST00000035307 ZNF530Q6P9A1 599 aaPredicted RBP15.09■□□□□ 0.01
CHPF2-201ENST00000035307 CASC1Q6TDU7 716 aa15.09■□□□□ 0.01
CHPF2-201ENST00000035307 FOXD4L3Q6VB84 417 aaPredicted RBP15.09■□□□□ 0.01
CHPF2-201ENST00000035307 NOB1Q9ULX3 412 aaKnown RBP15.09■□□□□ 0.01
CHPF2-201ENST00000035307 MPRIPQ6WCQ1 1025 aa15.08■□□□□ 0
CHPF2-201ENST00000035307 TOM1L2Q6ZVM7 507 aa15.08■□□□□ 0
CHPF2-201ENST00000035307 DUSP27Q5VZP5 1158 aa15.08■□□□□ 0
CHPF2-201ENST00000035307 PTPRTO14522 1441 aa15.08■□□□□ 0
CHPF2-201ENST00000035307 CLTCL1P53675 1640 aa15.08■□□□□ 0
CHPF2-201ENST00000035307 ANKRD36BQ8N2N9 1353 aa15.08■□□□□ 0
CHPF2-201ENST00000035307 TWISTNBQ3B726 338 aaPredicted RBP15.08■□□□□ 0
CHPF2-201ENST00000035307 ANXA1P04083 346 aa15.07■□□□□ 0
CHPF2-201ENST00000035307 KDM5DQ9BY66 1539 aa15.06■□□□□ 0
CHPF2-201ENST00000035307 KCNJ4P48050 445 aa15.06■□□□□ 0
CHPF2-201ENST00000035307 NPHP1O15259 732 aa15.06■□□□□ 0
CHPF2-201ENST00000035307 GNAI1P63096 354 aa15.06■□□□□ 0
CHPF2-201ENST00000035307 CROCC2H7BZ55 1655 aa15.05■□□□□ 0
CHPF2-201ENST00000035307 TRIM6-TRIM34B2RNG4 842 aa15.05■□□□□ 0
CHPF2-201ENST00000035307 TBX22Q9Y458 520 aa15.05■□□□□ 0
CHPF2-201ENST00000035307 ROBO2Q9HCK4 1378 aa15.05■□□□□ -0
CHPF2-201ENST00000035307 SSH1Q8WYL5 1049 aa15.05■□□□□ -0
CHPF2-201ENST00000035307 NAP1L2Q9ULW6 460 aaPredicted RBP15.05■□□□□ -0
CHPF2-201ENST00000035307 BACH2Q9BYV9 841 aa15.04■□□□□ -0
CHPF2-201ENST00000035307 CEP152O94986 1710 aa15.04■□□□□ -0
CHPF2-201ENST00000035307 BCORL1Q5H9F3 1711 aa15.04■□□□□ -0
CHPF2-201ENST00000035307 FCHSD2O94868 740 aa15.04■□□□□ -0
CHPF2-201ENST00000035307 SLC4A2P04920 1241 aa15.04■□□□□ -0
CHPF2-201ENST00000035307 EIF4A2Q14240 407 aaKnown RBP15.04■□□□□ -0
CHPF2-201ENST00000035307 TRPM2O94759 1503 aa15.04■□□□□ -0
CHPF2-201ENST00000035307 PRR36Q9H6K5 1346 aa15.04■□□□□ -0
CHPF2-201ENST00000035307 NFE2L2Q16236 605 aa15.04■□□□□ -0
CHPF2-201ENST00000035307 ASXL1Q8IXJ9 1541 aa15.04■□□□□ -0
CHPF2-201ENST00000035307 ERVK-7P63135 1459 aa15.03■□□□□ -0
CHPF2-201ENST00000035307 PLXNC1O60486 1568 aa15.03■□□□□ -0
CHPF2-201ENST00000035307 LRPPRCP42704 1394 aaKnown RBP15.03■□□□□ -0
CHPF2-201ENST00000035307 MAP3K19Q56UN5 1328 aa15.03■□□□□ -0
CHPF2-201ENST00000035307 FAM177BA6PVY3 158 aa15.02■□□□□ -0
CHPF2-201ENST00000035307 E9PCH4 1651 aa15.02■□□□□ -0
CHPF2-201ENST00000035307 KIDINS220Q9ULH0 1771 aa15.02■□□□□ -0
CHPF2-201ENST00000035307 PDZRN3Q9UPQ7 1066 aa15.02■□□□□ -0
CHPF2-201ENST00000035307 KDM5CP41229 1560 aa15.02□□□□□ -0.01
CHPF2-201ENST00000035307 F6X3S4 739 aa15.02□□□□□ -0.01
CHPF2-201ENST00000035307 PTCD1O75127 700 aaKnown RBP15.02□□□□□ -0.01
CHPF2-201ENST00000035307 PIP4K2AP48426 406 aaPredicted RBP15.02□□□□□ -0.01
CHPF2-201ENST00000035307 EFCAB6Q5THR3 1501 aa15.02□□□□□ -0.01
CHPF2-201ENST00000035307 NAP1L5Q96NT1 182 aaPredicted RBP15.01□□□□□ -0.01
CHPF2-201ENST00000035307 CHMP4BQ9H444 224 aaKnown RBP15.01□□□□□ -0.01
CHPF2-201ENST00000035307 MYL6BP14649 208 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms