RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 CCDC146Q8IYE0 955 aa18.9■□□□□ 0.62
RTFDC1-201ENST00000023939 RUNDC1Q96C34 613 aa18.9■□□□□ 0.62
RTFDC1-201ENST00000023939 IQSEC2Q5JU85 1478 aa18.9■□□□□ 0.62
RTFDC1-201ENST00000023939 ITSN1Q15811 1721 aa18.89■□□□□ 0.61
RTFDC1-201ENST00000023939 TRMT2AQ8IZ69 625 aaKnown RBP18.88■□□□□ 0.61
RTFDC1-201ENST00000023939 SLFN5Q08AF3 891 aa18.87■□□□□ 0.61
RTFDC1-201ENST00000023939 DUSP27Q5VZP5 1158 aa18.87■□□□□ 0.61
RTFDC1-201ENST00000023939 AATKQ6ZMQ8 1374 aa18.87■□□□□ 0.61
RTFDC1-201ENST00000023939 RRP1P56182 461 aaKnown RBP18.86■□□□□ 0.61
RTFDC1-201ENST00000023939 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.86■□□□□ 0.61
RTFDC1-201ENST00000023939 NRKQ7Z2Y5 1582 aa18.85■□□□□ 0.61
RTFDC1-201ENST00000023939 NCKAP5LQ9HCH0 1330 aa18.85■□□□□ 0.61
RTFDC1-201ENST00000023939 ANKARQ7Z5J8 1434 aa18.84■□□□□ 0.61
RTFDC1-201ENST00000023939 CCDC27Q2M243 656 aa18.84■□□□□ 0.61
RTFDC1-201ENST00000023939 E9PSI1 815 aa18.83■□□□□ 0.61
RTFDC1-201ENST00000023939 KCNA6P17658 529 aa18.83■□□□□ 0.6
RTFDC1-201ENST00000023939 POLKQ9UBT6 870 aa18.83■□□□□ 0.6
RTFDC1-201ENST00000023939 NKTRP30414 1462 aaKnown RBP18.82■□□□□ 0.6
RTFDC1-201ENST00000023939 USP6P35125 1406 aa18.82■□□□□ 0.6
RTFDC1-201ENST00000023939 SSH2Q76I76 1423 aa18.82■□□□□ 0.6
RTFDC1-201ENST00000023939 U2AF1L5P0DN76 240 aaPredicted RBP18.82■□□□□ 0.6
RTFDC1-201ENST00000023939 U2AF1Q01081 240 aaKnown RBP eCLIP18.82■□□□□ 0.6
RTFDC1-201ENST00000023939 NME9Q86XW9 330 aa18.82■□□□□ 0.6
RTFDC1-201ENST00000023939 WWC1Q8IX03 1113 aa18.82■□□□□ 0.6
RTFDC1-201ENST00000023939 TCP11L2Q8N4U5 519 aa18.82■□□□□ 0.6
RTFDC1-201ENST00000023939 CHD2O14647 1828 aaKnown RBP18.82■□□□□ 0.6
RTFDC1-201ENST00000023939 ACEP12821 1306 aa18.81■□□□□ 0.6
RTFDC1-201ENST00000023939 DIAPH1O60610 1272 aaKnown RBP18.8■□□□□ 0.6
RTFDC1-201ENST00000023939 COG3Q96JB2 828 aa18.8■□□□□ 0.6
RTFDC1-201ENST00000023939 CDK12Q9NYV4 1490 aaPredicted RBP18.8■□□□□ 0.6
RTFDC1-201ENST00000023939 TTC21BQ7Z4L5 1316 aa18.8■□□□□ 0.6
RTFDC1-201ENST00000023939 WDR63Q8IWG1 891 aa18.79■□□□□ 0.6
RTFDC1-201ENST00000023939 PLEKHF1Q96S99 279 aa18.79■□□□□ 0.6
RTFDC1-201ENST00000023939 NPHP4O75161 1426 aaPredicted RBP18.79■□□□□ 0.6
RTFDC1-201ENST00000023939 PNNQ9H307 717 aaKnown RBP18.78■□□□□ 0.6
RTFDC1-201ENST00000023939 OVOS2A0A0J9YW53 1432 aa18.78■□□□□ 0.6
RTFDC1-201ENST00000023939 OVOS2Q6IE36 1432 aa18.78■□□□□ 0.6
RTFDC1-201ENST00000023939 FMN2Q9NZ56 1722 aa18.77■□□□□ 0.6
RTFDC1-201ENST00000023939 TTC21AQ8NDW8 1320 aa18.77■□□□□ 0.6
RTFDC1-201ENST00000023939 MAP2P11137 1827 aaKnown RBP18.76■□□□□ 0.59
RTFDC1-201ENST00000023939 SPINK5Q9NQ38 1064 aaPredicted RBP18.76■□□□□ 0.59
RTFDC1-201ENST00000023939 USP31Q70CQ4 1352 aa18.75■□□□□ 0.59
RTFDC1-201ENST00000023939 U2SURPO15042 1029 aaKnown RBP18.74■□□□□ 0.59
RTFDC1-201ENST00000023939 FCHSD2O94868 740 aa18.74■□□□□ 0.59
RTFDC1-201ENST00000023939 ZRANB1Q9UGI0 708 aa18.74■□□□□ 0.59
RTFDC1-201ENST00000023939 NALCNQ8IZF0 1738 aa18.74■□□□□ 0.59
RTFDC1-201ENST00000023939 DMRT2Q9Y5R5 561 aa18.74■□□□□ 0.59
RTFDC1-201ENST00000023939 NWD1Q149M9 1564 aa18.72■□□□□ 0.59
RTFDC1-201ENST00000023939 NUTM2FA1L443 756 aa18.71■□□□□ 0.59
RTFDC1-201ENST00000023939 IL13P35225 146 aa18.71■□□□□ 0.59
RTFDC1-201ENST00000023939 EMILIN1Q9Y6C2 1016 aa18.71■□□□□ 0.59
RTFDC1-201ENST00000023939 ADGRL3Q9HAR2 1447 aa18.71■□□□□ 0.59
RTFDC1-201ENST00000023939 RRP7AQ9Y3A4 280 aaKnown RBP18.71■□□□□ 0.59
RTFDC1-201ENST00000023939 MAPK8IP3Q9UPT6 1336 aa18.71■□□□□ 0.59
RTFDC1-201ENST00000023939 FBLN1P23142 703 aa18.7■□□□□ 0.58
RTFDC1-201ENST00000023939 TMPOP42166 694 aaKnown RBP18.7■□□□□ 0.58
RTFDC1-201ENST00000023939 B4GALNT3Q6L9W6 998 aa18.7■□□□□ 0.58
RTFDC1-201ENST00000023939 RGPD8O14715 1765 aaPredicted RBP18.69■□□□□ 0.58
RTFDC1-201ENST00000023939 LRRC7Q96NW7 1537 aa18.69■□□□□ 0.58
RTFDC1-201ENST00000023939 KDM4FA0A1W2PPD8 638 aa18.69■□□□□ 0.58
RTFDC1-201ENST00000023939 RSPH6AQ9H0K4 717 aa18.69■□□□□ 0.58
RTFDC1-201ENST00000023939 NGDNQ8NEJ9 315 aaKnown RBP18.69■□□□□ 0.58
RTFDC1-201ENST00000023939 NEUROD2Q15784 382 aa18.68■□□□□ 0.58
RTFDC1-201ENST00000023939 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.68■□□□□ 0.58
RTFDC1-201ENST00000023939 IL16Q14005 1332 aa18.68■□□□□ 0.58
RTFDC1-201ENST00000023939 USP54Q70EL1 1684 aa18.67■□□□□ 0.58
RTFDC1-201ENST00000023939 PPM1GO15355 546 aaPredicted RBP18.67■□□□□ 0.58
RTFDC1-201ENST00000023939 PMFBP1Q8TBY8 1022 aa18.67■□□□□ 0.58
RTFDC1-201ENST00000023939 EXOC6Q8TAG9 804 aa18.66■□□□□ 0.58
RTFDC1-201ENST00000023939 MYH16Q9H6N6 1097 aa18.66■□□□□ 0.58
RTFDC1-201ENST00000023939 CCDC136Q96JN2 1154 aa18.66■□□□□ 0.58
RTFDC1-201ENST00000023939 TSHZ2Q9NRE2 1034 aa18.66■□□□□ 0.58
RTFDC1-201ENST00000023939 TRIM35Q9UPQ4 493 aa18.66■□□□□ 0.58
RTFDC1-201ENST00000023939 RRS1Q15050 365 aaKnown RBP18.65■□□□□ 0.58
RTFDC1-201ENST00000023939 PIK3C2AO00443 1686 aa18.64■□□□□ 0.57
RTFDC1-201ENST00000023939 PLIN1O60240 522 aa18.63■□□□□ 0.57
RTFDC1-201ENST00000023939 PRKAR2BP31323 418 aa18.63■□□□□ 0.57
RTFDC1-201ENST00000023939 NEFMP07197 916 aa18.63■□□□□ 0.57
RTFDC1-201ENST00000023939 CT47B1P0C2W7 299 aaPredicted RBP18.63■□□□□ 0.57
RTFDC1-201ENST00000023939 PHF8Q9UPP1 1060 aa18.62■□□□□ 0.57
RTFDC1-201ENST00000023939 RIPK4P57078 832 aa18.61■□□□□ 0.57
RTFDC1-201ENST00000023939 KIF24Q5T7B8 1368 aa18.61■□□□□ 0.57
RTFDC1-201ENST00000023939 PEAK1Q9H792 1746 aa18.61■□□□□ 0.57
RTFDC1-201ENST00000023939 NFE2L2Q16236 605 aa18.6■□□□□ 0.57
RTFDC1-201ENST00000023939 CRBNQ96SW2 442 aa18.6■□□□□ 0.57
RTFDC1-201ENST00000023939 SBNO1A3KN83 1393 aa18.59■□□□□ 0.57
RTFDC1-201ENST00000023939 EIF4A2Q14240 407 aaKnown RBP18.59■□□□□ 0.57
RTFDC1-201ENST00000023939 RGPD1P0DJD0 1748 aa18.58■□□□□ 0.56
RTFDC1-201ENST00000023939 MARF1Q9Y4F3 1742 aaKnown RBP18.58■□□□□ 0.56
RTFDC1-201ENST00000023939 MAP3K19Q56UN5 1328 aa18.58■□□□□ 0.56
RTFDC1-201ENST00000023939 RARSP54136 660 aaKnown RBP18.57■□□□□ 0.56
RTFDC1-201ENST00000023939 C20orf194Q5TEA3 1177 aa18.57■□□□□ 0.56
RTFDC1-201ENST00000023939 FLT4P35916 1363 aa18.57■□□□□ 0.56
RTFDC1-201ENST00000023939 FANCIQ9NVI1 1328 aa18.57■□□□□ 0.56
RTFDC1-201ENST00000023939 BCAR3O75815 825 aa18.57■□□□□ 0.56
RTFDC1-201ENST00000023939 HMOX1P09601 288 aa18.57■□□□□ 0.56
RTFDC1-201ENST00000023939 PDE3AQ14432 1141 aa18.57■□□□□ 0.56
RTFDC1-201ENST00000023939 PHACTR3Q96KR7 559 aa18.57■□□□□ 0.56
RTFDC1-201ENST00000023939 NCOA3Q9Y6Q9 1424 aa18.56■□□□□ 0.56
RTFDC1-201ENST00000023939 CALD1Q05682 793 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms