RNA–Protein interactions for RNA: ENST00000009180.8

CD9-201, Transcript of CD9 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD9, Length 1,169 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-201ENST00000009180 NINLQ9Y2I6 1382 aa13.97□□□□□ -0.17
CD9-201ENST00000009180 NRKQ7Z2Y5 1582 aa13.97□□□□□ -0.17
CD9-201ENST00000009180 MON2Q7Z3U7 1717 aa13.97□□□□□ -0.17
CD9-201ENST00000009180 ANKRD36BQ8N2N9 1353 aa13.96□□□□□ -0.17
CD9-201ENST00000009180 PAK3O75914 559 aaPredicted RBP13.96□□□□□ -0.17
CD9-201ENST00000009180 HDGFL2Q7Z4V5 671 aaPredicted RBP13.96□□□□□ -0.17
CD9-201ENST00000009180 CNKSR2Q8WXI2 1034 aa13.96□□□□□ -0.17
CD9-201ENST00000009180 TNS3Q68CZ2 1445 aa13.96□□□□□ -0.18
CD9-201ENST00000009180 PLEKHG5O94827 1062 aa13.95□□□□□ -0.18
CD9-201ENST00000009180 TERF2IPQ9NYB0 399 aa13.95□□□□□ -0.18
CD9-201ENST00000009180 SSH2Q76I76 1423 aa13.95□□□□□ -0.18
CD9-201ENST00000009180 SPATA31A3Q5VYP0 1347 aa13.94□□□□□ -0.18
CD9-201ENST00000009180 NUTM2GQ5VZR2 741 aa13.94□□□□□ -0.18
CD9-201ENST00000009180 LMOD2Q6P5Q4 547 aa13.94□□□□□ -0.18
CD9-201ENST00000009180 RTN4Q9NQC3 1192 aaKnown RBP13.94□□□□□ -0.18
CD9-201ENST00000009180 ALS2Q96Q42 1657 aa13.94□□□□□ -0.18
CD9-201ENST00000009180 SBNO1A3KN83 1393 aa13.94□□□□□ -0.18
CD9-201ENST00000009180 TTC21BQ7Z4L5 1316 aa13.93□□□□□ -0.18
CD9-201ENST00000009180 EDC4Q6P2E9 1401 aaKnown RBP13.93□□□□□ -0.18
CD9-201ENST00000009180 NSD3Q9BZ95 1437 aa13.93□□□□□ -0.18
CD9-201ENST00000009180 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.93□□□□□ -0.18
CD9-201ENST00000009180 CARD14Q9BXL6 1004 aa13.93□□□□□ -0.18
CD9-201ENST00000009180 PNPLA6Q8IY17 1366 aa13.93□□□□□ -0.18
CD9-201ENST00000009180 PIK3C2AO00443 1686 aa13.92□□□□□ -0.18
CD9-201ENST00000009180 LRRC59Q96AG4 307 aaKnown RBP13.92□□□□□ -0.18
CD9-201ENST00000009180 ZNF692Q9BU19 519 aaPredicted RBP13.92□□□□□ -0.18
CD9-201ENST00000009180 PANK3Q9H999 370 aa13.92□□□□□ -0.18
CD9-201ENST00000009180 SHPRHQ149N8 1683 aa13.91□□□□□ -0.18
CD9-201ENST00000009180 NME9Q86XW9 330 aa13.91□□□□□ -0.18
CD9-201ENST00000009180 ZRANB1Q9UGI0 708 aa13.91□□□□□ -0.18
CD9-201ENST00000009180 JCADQ9P266 1359 aa13.91□□□□□ -0.18
CD9-201ENST00000009180 ZNF316A6NFI3 1004 aaPredicted RBP13.9□□□□□ -0.18
CD9-201ENST00000009180 ILDR2Q71H61 639 aa13.9□□□□□ -0.18
CD9-201ENST00000009180 COL22A1Q8NFW1 1626 aaPredicted RBP13.9□□□□□ -0.19
CD9-201ENST00000009180 ARHGEF10O15013 1369 aa13.89□□□□□ -0.19
CD9-201ENST00000009180 ABTB2Q8N961 1025 aa13.89□□□□□ -0.19
CD9-201ENST00000009180 CABLES1Q8TDN4 633 aa13.89□□□□□ -0.19
CD9-201ENST00000009180 MED1Q15648 1581 aaPredicted RBP13.88□□□□□ -0.19
CD9-201ENST00000009180 BRD4O60885 1362 aaPredicted RBP13.88□□□□□ -0.19
CD9-201ENST00000009180 ABCA3Q99758 1704 aa13.88□□□□□ -0.19
CD9-201ENST00000009180 LRP6O75581 1613 aa13.88□□□□□ -0.19
CD9-201ENST00000009180 TTC21AQ8NDW8 1320 aa13.88□□□□□ -0.19
CD9-201ENST00000009180 MARF1Q9Y4F3 1742 aaKnown RBP13.87□□□□□ -0.19
CD9-201ENST00000009180 CRYBG1Q9Y4K1 1723 aa13.87□□□□□ -0.19
CD9-201ENST00000009180 NUTM2BA6NNL0 878 aaPredicted RBP13.87□□□□□ -0.19
CD9-201ENST00000009180 NUTM2EB1AL46 878 aaPredicted RBP13.87□□□□□ -0.19
CD9-201ENST00000009180 NUTM2AQ8IVF1 878 aaPredicted RBP13.87□□□□□ -0.19
CD9-201ENST00000009180 PHRF1Q9P1Y6 1649 aaKnown RBP13.86□□□□□ -0.19
CD9-201ENST00000009180 DDX10Q13206 875 aaKnown RBP13.86□□□□□ -0.19
CD9-201ENST00000009180 KIF20BQ96Q89 1820 aa13.85□□□□□ -0.19
CD9-201ENST00000009180 OVOS2A0A0J9YW53 1432 aa13.85□□□□□ -0.19
CD9-201ENST00000009180 OVOS2Q6IE36 1432 aa13.85□□□□□ -0.19
CD9-201ENST00000009180 NLRP6P59044 892 aa13.85□□□□□ -0.19
CD9-201ENST00000009180 GGNBP2Q9H3C7 697 aa13.85□□□□□ -0.19
CD9-201ENST00000009180 USP19O94966 1318 aa13.85□□□□□ -0.19
CD9-201ENST00000009180 SOCS7O14512 581 aa13.84□□□□□ -0.19
CD9-201ENST00000009180 FYB1O15117 783 aa13.84□□□□□ -0.19
CD9-201ENST00000009180 SOX12O15370 315 aa13.84□□□□□ -0.19
CD9-201ENST00000009180 CNGB1Q14028 1251 aaPredicted RBP13.84□□□□□ -0.19
CD9-201ENST00000009180 SLIT3O75094 1523 aa13.84□□□□□ -0.19
CD9-201ENST00000009180 USP31Q70CQ4 1352 aa13.83□□□□□ -0.19
CD9-201ENST00000009180 USP54Q70EL1 1684 aa13.83□□□□□ -0.2
CD9-201ENST00000009180 ADAMTS2O95450 1211 aa13.83□□□□□ -0.2
CD9-201ENST00000009180 HAP1P54257 671 aaPredicted RBP13.83□□□□□ -0.2
CD9-201ENST00000009180 NLRP13Q86W25 1043 aa13.83□□□□□ -0.2
CD9-201ENST00000009180 CGNL1Q0VF96 1302 aa13.83□□□□□ -0.2
CD9-201ENST00000009180 SPATA31A6Q5VVP1 1343 aa13.83□□□□□ -0.2
CD9-201ENST00000009180 PER1O15534 1290 aaPredicted RBP13.82□□□□□ -0.2
CD9-201ENST00000009180 AMER1Q5JTC6 1135 aaPredicted RBP13.82□□□□□ -0.2
CD9-201ENST00000009180 KNSTRNQ9Y448 316 aa13.82□□□□□ -0.2
CD9-201ENST00000009180 NFAT5O94916 1531 aa13.81□□□□□ -0.2
CD9-201ENST00000009180 COG3Q96JB2 828 aa13.81□□□□□ -0.2
CD9-201ENST00000009180 CC2D1BQ5T0F9 858 aaKnown RBP13.8□□□□□ -0.2
CD9-201ENST00000009180 ANKRD26Q9UPS8 1709 aa13.79□□□□□ -0.2
CD9-201ENST00000009180 ZBTB7CA1YPR0 619 aa13.79□□□□□ -0.2
CD9-201ENST00000009180 GCP02774 474 aa13.79□□□□□ -0.2
CD9-201ENST00000009180 FBLN1P23142 703 aa13.79□□□□□ -0.2
CD9-201ENST00000009180 ZC3H6P61129 1189 aaKnown RBP13.79□□□□□ -0.2
CD9-201ENST00000009180 NPM3O75607 178 aaKnown RBP13.78□□□□□ -0.2
CD9-201ENST00000009180 MEX3CQ5U5Q3 659 aaKnown RBP13.78□□□□□ -0.2
CD9-201ENST00000009180 KIAA0232Q92628 1395 aa13.78□□□□□ -0.2
CD9-201ENST00000009180 NSD2O96028 1365 aa13.77□□□□□ -0.21
CD9-201ENST00000009180 TNNT2P45379 298 aaPredicted RBP13.77□□□□□ -0.21
CD9-201ENST00000009180 CHRNA2Q15822 529 aa13.77□□□□□ -0.21
CD9-201ENST00000009180 C8orf37Q96NL8 207 aa13.76□□□□□ -0.21
CD9-201ENST00000009180 RRS1Q15050 365 aaKnown RBP13.75□□□□□ -0.21
CD9-201ENST00000009180 MORC1Q86VD1 984 aa13.75□□□□□ -0.21
CD9-201ENST00000009180 PRDM11Q9NQV5 511 aa13.75□□□□□ -0.21
CD9-201ENST00000009180 CPDO75976 1380 aa13.74□□□□□ -0.21
CD9-201ENST00000009180 NPC1L1Q9UHC9 1359 aa13.74□□□□□ -0.21
CD9-201ENST00000009180 FAM83GA6ND36 823 aa13.74□□□□□ -0.21
CD9-201ENST00000009180 KCNH5Q8NCM2 988 aa13.74□□□□□ -0.21
CD9-201ENST00000009180 PLCH1Q4KWH8 1693 aa13.74□□□□□ -0.21
CD9-201ENST00000009180 ARHGEF25Q86VW2 580 aa13.73□□□□□ -0.21
CD9-201ENST00000009180 LTN1O94822 1766 aa13.73□□□□□ -0.21
CD9-201ENST00000009180 COL14A1Q05707 1796 aaKnown RBP13.73□□□□□ -0.21
CD9-201ENST00000009180 PEAK1Q9H792 1746 aa13.73□□□□□ -0.21
CD9-201ENST00000009180 LMO7Q8WWI1 1683 aa13.72□□□□□ -0.21
CD9-201ENST00000009180 AFF2P51816 1311 aa13.72□□□□□ -0.21
CD9-201ENST00000009180 MAP3K19Q56UN5 1328 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms